CircRNA Information

General Information
circRNA Basic Information
CircID chr6:108447214|108477292
Strand +
CircType exon
Host Gene ENSG00000135537.16;
Algorism find_circ;CIRI2;DCC;
Sequence GAATATTGTAATACAGTCCAGCTAGATTCTGGGATAGATTACCGGAAAAGGGAACTTCCTGCTGCAGGAAAACTCTACTACCTCACAAGTGAAGCTGATGTGGAGGCTGTCATGGATAAGTTGTTTGATGAGCTGGCTCAGAAACAAAATGATTTAACTAGACCAAGGATTCTAAAAGTGCAAGGCAGAGAGCTGCGCCTGAATAAAGCCTGTGGAACCGTTGCCGACTGCACATTTGAAGAGCTGTGTGAGAGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr6:108447214|108477292 ELAVL1 2 1 0
chr6:108447214|108477292 HNRNPC 9 1 0
chr6:108447214|108477292 SRSF1 0 2 3
chr6:108447214|108477292 NOP58 0 3 1
chr6:108447214|108477292 IGF2BP2 0 1 0
chr6:108447214|108477292 U2AF2 0 1 1
chr6:108447214|108477292 NOP56 0 2 0
chr6:108447214|108477292 FUS 1 0 0
chr6:108447214|108477292 PRPF8 0 2 0
chr6:108447214|108477292 HNRNPL 0 1 0
chr6:108447214|108477292 TAF15 3 0 0
chr6:108447214|108477292 FIP1L1 1 0 0
chr6:108447214|108477292 BUD13 0 0 1
chr6:108447214|108477292 PTBP1 4 1 0
chr6:108447214|108477292 TARDBP 1 0 0
chr6:108447214|108477292 HNRNPA1 0 1 0
chr6:108447214|108477292 EIF4A3 0 1 3
chr6:108447214|108477292 AGO2 0 0 1