CircRNA Information

General Information
circRNA Basic Information
CircID chr6:109641518|109656884
Strand -
CircType exon
Host Gene ENSG00000155085.15;
Algorism find_circ;CIRI2;DCC;
Sequence GCATTTATTGCCGAAATGCAGATGGTGGCTGAAATTCTTCATCATCTAGTTCAGAGGCCTGAAGATTATTTGGAAAATGTTGAAAACATTGTTAAGCTTTATAAGGAAACAATTCTCCAAACTTTAGAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr6:109641518|109656884
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MQMVAEILHHLVQRPEDYLENVENIVKLYKETILQTLE
Nucleotide Sequence ATGCAGATGGTGGCTGAAATTCTTCATCATCTAGTTCAGAGGCCTGAAGATTATTTGGAAAATGTTGAAAACATTGTTAAGCTTTATAAGGAAACAATTCTCCAAACTTTAGAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr6:109641518|109656884 BUD13 1 0 0
chr6:109641518|109656884 FUS 0 1 0
chr6:109641518|109656884 U2AF2 0 1 0
chr6:109641518|109656884 UPF1 0 1 0
chr6:109641518|109656884 TRA2A 0 0 1
chr6:109641518|109656884 FBL 1 0 0