CircRNA Information

General Information
circRNA Basic Information
CircID chr6:11190724|11190862
Strand -
CircType exon
Host Gene ENSG00000111859.15;
Algorism CIRI2;
Sequence GTGGACATGTTACTCCGGGTGCTGCCTGTACTGGAGAAAGACAATCGGTTGATCCCATCCACCAAGTCCCGAGAGCCTTTAGCATCTGGCGGGTTATGCAGAGGGACATCATAAACACCATCCCTTTCCTGGGGGTTTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:11190724|11190862 hsa-miR-511-5p 0 0 1
chr6:11190724|11190862 hsa-miR-511-3p 0 0 1
chr6:11190724|11190862 hsa-miR-638 1 0 1
chr6:11190724|11190862 hsa-miR-766-5p 0 0 1
chr6:11190724|11190862 hsa-miR-766-3p 0 0 1
chr6:11190724|11190862 hsa-miR-802 0 0 1
chr6:11190724|11190862 hsa-miR-1272 0 0 1
chr6:11190724|11190862 hsa-miR-1322 0 0 1
chr6:11190724|11190862 hsa-miR-770-5p 0 0 1
chr6:11190724|11190862 hsa-miR-361-3p 1 1 1
chr6:11190724|11190862 hsa-miR-769-3p 0 1 1
chr6:11190724|11190862 hsa-miR-450b-3p 0 0 1
chr6:11190724|11190862 hsa-miR-515-5p 0 0 1
chr6:11190724|11190862 hsa-miR-642 0 0 1
chr6:11190724|11190862 hsa-miR-219-5p 0 0 1
chr6:11190724|11190862 hsa-miR-608 1 0 0
chr6:11190724|11190862 hsa-miR-1193 1 0 0
chr6:11190724|11190862 hsa-miR-3936 1 0 0
chr6:11190724|11190862 hsa-miR-4514 0 1 0
chr6:11190724|11190862 hsa-miR-4651 1 0 0
chr6:11190724|11190862 hsa-miR-4654 1 0 0
chr6:11190724|11190862 hsa-miR-4673 0 1 0
chr6:11190724|11190862 hsa-miR-4692 0 1 0
chr6:11190724|11190862 hsa-miR-4741 1 0 0
chr6:11190724|11190862 hsa-miR-4726-3p 1 0 0
chr6:11190724|11190862 hsa-miR-6894-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6880-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6840-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6727-5p 0 1 0
chr6:11190724|11190862 hsa-miR-6748-5p 1 1 0
chr6:11190724|11190862 hsa-miR-5088-5p 1 1 0
chr6:11190724|11190862 hsa-miR-4707-3p 1 0 0
chr6:11190724|11190862 hsa-miR-652-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6830-3p 0 1 0
chr6:11190724|11190862 hsa-miR-3065-3p 0 1 0
chr6:11190724|11190862 hsa-miR-2276-5p 0 1 0
chr6:11190724|11190862 hsa-miR-6859-3p 1 0 0
chr6:11190724|11190862 hsa-miR-219b-5p 0 1 0
chr6:11190724|11190862 hsa-miR-642a-5p 0 1 0
chr6:11190724|11190862 hsa-miR-1233-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6769b-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6775-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6756-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6769a-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6780a-5p 1 0 0
chr6:11190724|11190862 hsa-miR-4758-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6511b-5p 0 1 0
chr6:11190724|11190862 hsa-miR-10396a-3p 1 0 0
chr6:11190724|11190862 hsa-miR-10396b-3p 1 0 0
chr6:11190724|11190862 hsa-miR-6766-5p 1 0 0
chr6:11190724|11190862 hsa-miR-6766-3p 0 1 0
chr6:11190724|11190862 hsa-miR-4712-5p 0 1 0
chr6:11190724|11190862 hsa-miR-4782-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:11190724|11190862
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MLLRVLPVLEKDNRLIPSTKSREPLASGGLCRGTS
Nucleotide Sequence ATGTTACTCCGGGTGCTGCCTGTACTGGAGAAAGACAATCGGTTGATCCCATCCACCAAGTCCCGAGAGCCTTTAGCATCTGGCGGGTTATGCAGAGGGACATCATAA

CircID chr6:11190724|11190862
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MVFMMSLCITRQMLKALGTWWMGSTDCLSPVQAAPGVTCP
Nucleotide Sequence ATGGTGTTTATGATGTCCCTCTGCATAACCCGCCAGATGCTAAAGGCTCTCGGGACTTGGTGGATGGGATCAACCGATTGTCTTTCTCCAGTACAGGCAGCACCCGGAGTAACATGTCCA

CircID chr6:11190724|11190862
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MHNPPDAKGSRDLVDGINRLSFSSTGSTRSNMS
Nucleotide Sequence CTGCATAACCCGCCAGATGCTAAAGGCTCTCGGGACTTGGTGGATGGGATCAACCGATTGTCTTTCTCCAGTACAGGCAGCACCCGGAGTAACATGTCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites