CircRNA Information

General Information
circRNA Basic Information
CircID chr6:11213350|11213713
Strand -
CircType exon
Host Gene ENSG00000111859.15;
Algorism CIRI2;
Sequence CTCTTGTTCTTGGGTGCCGTGGCCAGTGGGGACTTGGTAAATTCCCTGATTTTGGTAGGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCAGTCCAGAGGCAGGCTGCTCGTGACTGGAGGCAGTCTCCTGCATGGGACCAATCAGAAGCTTCACCCGGTTGCCTGGGACAATGCCTTGCCGACCGTGTAATGAGCACAGCCACCATCCTTCCAGTCCCCCTGTGTTCTGCTCTATGACGGTCAGGATGTCTCCCTTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATTGTCATATAAGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:11213350|11213713 hsa-miR-107 0 0 1
chr6:11213350|11213713 hsa-miR-133b 0 0 1
chr6:11213350|11213713 hsa-miR-422a 0 0 1
chr6:11213350|11213713 hsa-miR-425-5p 0 0 1
chr6:11213350|11213713 hsa-miR-425-3p 0 0 1
chr6:11213350|11213713 hsa-miR-376b-5p 0 0 1
chr6:11213350|11213713 hsa-miR-376b-3p 0 0 1
chr6:11213350|11213713 hsa-miR-193b-5p 0 0 1
chr6:11213350|11213713 hsa-miR-193b-3p 0 0 1
chr6:11213350|11213713 hsa-miR-588 0 0 1
chr6:11213350|11213713 hsa-miR-596 0 0 1
chr6:11213350|11213713 hsa-miR-602 0 0 1
chr6:11213350|11213713 hsa-miR-648 0 0 1
chr6:11213350|11213713 hsa-miR-922 0 0 1
chr6:11213350|11213713 hsa-miR-1227-5p 0 0 1
chr6:11213350|11213713 hsa-miR-1227-3p 0 0 1
chr6:11213350|11213713 hsa-miR-1286 0 0 1
chr6:11213350|11213713 hsa-miR-1256 0 0 1
chr6:11213350|11213713 hsa-miR-1288-5p 0 0 1
chr6:11213350|11213713 hsa-miR-1288-3p 0 0 1
chr6:11213350|11213713 hsa-miR-127-5p 0 0 1
chr6:11213350|11213713 hsa-miR-574-5p 0 0 1
chr6:11213350|11213713 hsa-miR-509-3p 0 0 1
chr6:11213350|11213713 hsa-miR-193a-3p 0 0 1
chr6:11213350|11213713 hsa-miR-103 0 0 1
chr6:11213350|11213713 hsa-miR-220c 0 0 1
chr6:11213350|11213713 hsa-miR-378 0 0 1
chr6:11213350|11213713 hsa-miR-1269 0 0 1
chr6:11213350|11213713 hsa-miR-376a 0 0 1
chr6:11213350|11213713 hsa-miR-133a 0 0 1
chr6:11213350|11213713 hsa-miR-1259 0 0 1
chr6:11213350|11213713 hsa-miR-3131 1 0 0
chr6:11213350|11213713 hsa-miR-4449 1 0 0
chr6:11213350|11213713 hsa-miR-4450 1 0 0
chr6:11213350|11213713 hsa-miR-4525 1 0 0
chr6:11213350|11213713 hsa-miR-4647 1 0 0
chr6:11213350|11213713 hsa-miR-4656 1 0 0
chr6:11213350|11213713 hsa-miR-4739 1 0 0
chr6:11213350|11213713 hsa-miR-4754 1 0 0
chr6:11213350|11213713 hsa-miR-5698 1 0 0
chr6:11213350|11213713 hsa-miR-6085 1 0 0
chr6:11213350|11213713 hsa-miR-12115 1 0 0
chr6:11213350|11213713 hsa-miR-12128 1 0 0
chr6:11213350|11213713 hsa-miR-6857-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6510-5p 1 0 0
chr6:11213350|11213713 hsa-miR-8071 1 0 0
chr6:11213350|11213713 hsa-miR-4722-5p 1 0 0
chr6:11213350|11213713 hsa-miR-7160-5p 1 0 0
chr6:11213350|11213713 hsa-miR-4655-5p 1 0 0
chr6:11213350|11213713 hsa-miR-8069 1 0 0
chr6:11213350|11213713 hsa-miR-6732-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6805-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6798-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6850-5p 1 0 0
chr6:11213350|11213713 hsa-miR-885-3p 1 0 0
chr6:11213350|11213713 hsa-miR-6771-5p 1 0 0
chr6:11213350|11213713 hsa-miR-4717-3p 1 0 0
chr6:11213350|11213713 hsa-miR-149-3p 1 0 0
chr6:11213350|11213713 hsa-miR-3191-3p 1 0 0
chr6:11213350|11213713 hsa-miR-6513-3p 1 0 0
chr6:11213350|11213713 hsa-miR-4763-3p 1 0 0
chr6:11213350|11213713 hsa-miR-6870-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6726-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6813-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6722-3p 1 0 0
chr6:11213350|11213713 hsa-miR-6797-5p 1 0 0
chr6:11213350|11213713 hsa-miR-7111-5p 1 0 0
chr6:11213350|11213713 hsa-miR-4685-3p 1 0 0
chr6:11213350|11213713 hsa-miR-3620-5p 1 0 0
chr6:11213350|11213713 hsa-miR-10526-3p 1 0 0
chr6:11213350|11213713 hsa-miR-1909-3p 1 0 0
chr6:11213350|11213713 hsa-miR-328-5p 1 0 0
chr6:11213350|11213713 hsa-miR-4749-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6735-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6794-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6795-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6846-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6848-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6887-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6885-5p 1 0 0
chr6:11213350|11213713 hsa-miR-939-5p 1 0 0
chr6:11213350|11213713 hsa-miR-6856-5p 1 0 0
chr6:11213350|11213713 hsa-miR-4665-5p 1 0 0
chr6:11213350|11213713 hsa-miR-4716-3p 1 0 0
chr6:11213350|11213713 hsa-miR-1185-1-3p 1 0 0
chr6:11213350|11213713 hsa-miR-1185-2-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:11213350|11213713
ORF Type ORF1
Protein Length 81
Nucleotide Length 246
Protein Sequence MFLGAVASGDLVNSLILVGRWHLVDGVSGSSLWVWHLIELLLAKGLLHQSRGRLLVTGGSLLHGTNQKLHPVAWDNALPTV
Nucleotide Sequence TTGTTCTTGGGTGCCGTGGCCAGTGGGGACTTGGTAAATTCCCTGATTTTGGTAGGAAGGTGGCACTTGGTAGATGGTGTCTCGGGGAGCAGCCTGTGGGTTTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCAGTCCAGAGGCAGGCTGCTCGTGACTGGAGGCAGTCTCCTGCATGGGACCAATCAGAAGCTTCACCCGGTTGCCTGGGACAATGCCTTGCCGACCGTGTAA
CircID chr6:11213350|11213713
ORF Type ORF2
Protein Length 64
Nucleotide Length 192
Protein Sequence MEAVSCMGPIRSFTRLPGTMPCRPCNEHSHHPSSPPVFCSMTVRMSPLRKASSSAHSGTLSYKA
Nucleotide Sequence CTGGAGGCAGTCTCCTGCATGGGACCAATCAGAAGCTTCACCCGGTTGCCTGGGACAATGCCTTGCCGACCGTGTAATGAGCACAGCCACCATCCTTCCAGTCCCCCTGTGTTCTGCTCTATGACGGTCAGGATGTCTCCCTTGCGAAAGGCCAGTTCCTCGGCACACTCTGGGACATTGTCATATAAGGCC
CircID chr6:11213350|11213713
ORF Type ORF3
Protein Length 63
Nucleotide Length 192
Protein Sequence MALDRASVGQRSAASVQRQAARDWRQSPAWDQSEASPGCLGQCLADRVMSTATILPVPLCSAL
Nucleotide Sequence TTGGCACTTGATAGAGCTTCTGTTGGCCAAAGGTCTGCTGCATCAGTCCAGAGGCAGGCTGCTCGTGACTGGAGGCAGTCTCCTGCATGGGACCAATCAGAAGCTTCACCCGGTTGCCTGGGACAATGCCTTGCCGACCGTGTAATGAGCACAGCCACCATCCTTCCAGTCCCCCTGTGTTCTGCTCTATGA
CircID chr6:11213350|11213713
ORF Type ORF4
Protein Length 88
Nucleotide Length 264
Protein Sequence MVAVLITRSARHCPRQPGEASDWSHAGDCLQSRAACLWTDAADLWPTEALSSAKPTGCSPRHHLPSATFLPKSGNLPSPHWPRHPRTR
Nucleotide Sequence ATGGTGGCTGTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTCTGGACTGATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCCTACCAAAATCAGGGAATTTACCAAGTCCCCACTGGCCACGGCACCCAAGAACAAGA
CircID chr6:11213350|11213713
ORF Type ORF5
Protein Length 109
Nucleotide Length 327
Protein Sequence MAFRKGDILTVIEQNTGGLEGWWLCSLHGRQGIVPGNRVKLLIGPMQETASSHEQPASGLMQQTFGQQKLYQVPNPQAAPRDTIYQVPPSYQNQGIYQVPTGHGTQEQE
Nucleotide Sequence CTGGCCTTTCGCAAGGGAGACATCCTGACCGTCATAGAGCAGAACACAGGGGGACTGGAAGGATGGTGGCTGTGCTCATTACACGGTCGGCAAGGCATTGTCCCAGGCAACCGGGTGAAGCTTCTGATTGGTCCCATGCAGGAGACTGCCTCCAGTCACGAGCAGCCTGCCTCTGGACTGATGCAGCAGACCTTTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCCTACCAAAATCAGGGAATTTACCAAGTCCCCACTGGCCACGGCACCCAAGAACAAGAG
CircID chr6:11213350|11213713
ORF Type ORF6
Protein Length 44
Nucleotide Length 132
Protein Sequence MANRSSIKCQTHRLLPETPSTKCHLPTKIREFTKSPLATAPKNK
Nucleotide Sequence TTGGCCAACAGAAGCTCTATCAAGTGCCAAACCCACAGGCTGCTCCCCGAGACACCATCTACCAAGTGCCACCTTCCTACCAAAATCAGGGAATTTACCAAGTCCCCACTGGCCACGGCACCCAAGAACAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab