CircRNA Information

General Information
circRNA Basic Information
CircID chr6:116253457|116253599
Strand -
CircType exon
Host Gene ENSG00000187189.10;
Algorism CIRI2;
Sequence CTTTTTTTCCTTCTGCACTACCTTCTTTTCCTCCATCGCCGCCCCTGCTTCTCCCTCCTTTTCCACTGCTGCCGAGATGGCGCGTTTTTTAGTCGTCACTTCCTTGGCCTTCTTCCCCGGTATCATCTGAGACCCCAAGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:116253457|116253599 hsa-miR-130a-5p 0 0 1
chr6:116253457|116253599 hsa-miR-130a-3p 0 0 1
chr6:116253457|116253599 hsa-miR-301a-5p 0 0 1
chr6:116253457|116253599 hsa-miR-301a-3p 0 0 1
chr6:116253457|116253599 hsa-miR-130b-5p 0 0 1
chr6:116253457|116253599 hsa-miR-130b-3p 0 0 1
chr6:116253457|116253599 hsa-miR-196b-5p 0 0 1
chr6:116253457|116253599 hsa-miR-196b-3p 0 0 1
chr6:116253457|116253599 hsa-miR-523-5p 0 0 1
chr6:116253457|116253599 hsa-miR-523-3p 0 0 1
chr6:116253457|116253599 hsa-miR-454-5p 0 0 1
chr6:116253457|116253599 hsa-miR-454-3p 0 0 1
chr6:116253457|116253599 hsa-miR-765 1 1 1
chr6:116253457|116253599 hsa-miR-298 1 1 1
chr6:116253457|116253599 hsa-miR-301b-5p 0 0 1
chr6:116253457|116253599 hsa-miR-301b-3p 0 0 1
chr6:116253457|116253599 hsa-miR-1252-5p 0 0 1
chr6:116253457|116253599 hsa-miR-1252-3p 0 0 1
chr6:116253457|116253599 hsa-miR-1307-5p 0 0 1
chr6:116253457|116253599 hsa-miR-1307-3p 0 0 1
chr6:116253457|116253599 hsa-miR-615-5p 0 0 1
chr6:116253457|116253599 hsa-miR-196a 0 0 1
chr6:116253457|116253599 hsa-miR-608 1 0 0
chr6:116253457|116253599 hsa-miR-658 1 0 0
chr6:116253457|116253599 hsa-miR-762 1 0 0
chr6:116253457|116253599 hsa-miR-1262 1 0 0
chr6:116253457|116253599 hsa-miR-1268a 1 0 0
chr6:116253457|116253599 hsa-miR-1275 1 0 0
chr6:116253457|116253599 hsa-miR-3141 1 0 0
chr6:116253457|116253599 hsa-miR-3148 1 0 0
chr6:116253457|116253599 hsa-miR-3153 1 0 0
chr6:116253457|116253599 hsa-miR-3154 1 0 0
chr6:116253457|116253599 hsa-miR-3175 1 0 0
chr6:116253457|116253599 hsa-miR-3185 1 1 0
chr6:116253457|116253599 hsa-miR-3196 1 1 0
chr6:116253457|116253599 hsa-miR-3197 1 0 0
chr6:116253457|116253599 hsa-miR-4298 1 0 0
chr6:116253457|116253599 hsa-miR-4257 1 0 0
chr6:116253457|116253599 hsa-miR-4271 1 1 0
chr6:116253457|116253599 hsa-miR-4281 1 0 0
chr6:116253457|116253599 hsa-miR-3665 1 0 0
chr6:116253457|116253599 hsa-miR-3915 1 1 0
chr6:116253457|116253599 hsa-miR-3918 1 0 0
chr6:116253457|116253599 hsa-miR-3936 1 0 0
chr6:116253457|116253599 hsa-miR-1268b 1 0 0
chr6:116253457|116253599 hsa-miR-4458 1 0 0
chr6:116253457|116253599 hsa-miR-4467 1 0 0
chr6:116253457|116253599 hsa-miR-4476 1 0 0
chr6:116253457|116253599 hsa-miR-4484 1 0 0
chr6:116253457|116253599 hsa-miR-4488 1 0 0
chr6:116253457|116253599 hsa-miR-4493 1 0 0
chr6:116253457|116253599 hsa-miR-4496 1 0 0
chr6:116253457|116253599 hsa-miR-4498 1 0 0
chr6:116253457|116253599 hsa-miR-4510 1 1 0
chr6:116253457|116253599 hsa-miR-4516 1 0 0
chr6:116253457|116253599 hsa-miR-4519 0 1 0
chr6:116253457|116253599 hsa-miR-4533 1 0 0
chr6:116253457|116253599 hsa-miR-4534 1 1 0
chr6:116253457|116253599 hsa-miR-3960 1 0 0
chr6:116253457|116253599 hsa-miR-4647 1 0 0
chr6:116253457|116253599 hsa-miR-4651 1 0 0
chr6:116253457|116253599 hsa-miR-4675 1 0 0
chr6:116253457|116253599 hsa-miR-4688 1 0 0
chr6:116253457|116253599 hsa-miR-4689 1 0 0
chr6:116253457|116253599 hsa-miR-4706 1 0 0
chr6:116253457|116253599 hsa-miR-4739 1 1 0
chr6:116253457|116253599 hsa-miR-4779 1 1 0
chr6:116253457|116253599 hsa-miR-5093 1 0 0
chr6:116253457|116253599 hsa-miR-5698 1 0 0
chr6:116253457|116253599 hsa-miR-5703 1 1 0
chr6:116253457|116253599 hsa-miR-5787 1 0 0
chr6:116253457|116253599 hsa-miR-6081 1 1 0
chr6:116253457|116253599 hsa-miR-6085 1 0 0
chr6:116253457|116253599 hsa-miR-6090 1 0 0
chr6:116253457|116253599 hsa-miR-6124 1 1 0
chr6:116253457|116253599 hsa-miR-6125 1 0 0
chr6:116253457|116253599 hsa-miR-6127 1 1 0
chr6:116253457|116253599 hsa-miR-6129 1 0 0
chr6:116253457|116253599 hsa-miR-6132 1 0 0
chr6:116253457|116253599 hsa-miR-6133 1 1 0
chr6:116253457|116253599 hsa-miR-6165 1 0 0
chr6:116253457|116253599 hsa-miR-6860 1 0 0
chr6:116253457|116253599 hsa-miR-7150 1 0 0
chr6:116253457|116253599 hsa-miR-7704 1 0 0
chr6:116253457|116253599 hsa-miR-8072 1 0 0
chr6:116253457|116253599 hsa-miR-8073 1 0 0
chr6:116253457|116253599 hsa-miR-8085 1 0 0
chr6:116253457|116253599 hsa-miR-8088 1 0 0
chr6:116253457|116253599 hsa-miR-8089 1 0 0
chr6:116253457|116253599 hsa-miR-12114 1 0 0
chr6:116253457|116253599 hsa-miR-12115 1 0 0
chr6:116253457|116253599 hsa-miR-12118 1 1 0
chr6:116253457|116253599 hsa-miR-12120 1 0 0
chr6:116253457|116253599 hsa-miR-12122 1 0 0
chr6:116253457|116253599 hsa-miR-4433b-3p 1 0 0
chr6:116253457|116253599 hsa-miR-7155-5p 1 0 0
chr6:116253457|116253599 hsa-miR-4433a-3p 1 0 0
chr6:116253457|116253599 hsa-miR-7106-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6894-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6799-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6510-5p 1 1 0
chr6:116253457|116253599 hsa-miR-766-5p 1 1 0
chr6:116253457|116253599 hsa-miR-139-3p 1 0 0
chr6:116253457|116253599 hsa-miR-6833-5p 0 1 0
chr6:116253457|116253599 hsa-miR-3934-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6515-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6089 1 0 0
chr6:116253457|116253599 hsa-miR-6757-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6873-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6880-5p 1 1 0
chr6:116253457|116253599 hsa-miR-7847-3p 1 1 0
chr6:116253457|116253599 hsa-miR-4695-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6746-5p 1 0 0
chr6:116253457|116253599 hsa-miR-4709-3p 1 0 0
chr6:116253457|116253599 hsa-miR-4722-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6730-5p 1 0 0
chr6:116253457|116253599 hsa-miR-7154-3p 1 0 0
chr6:116253457|116253599 hsa-miR-4753-5p 0 1 0
chr6:116253457|116253599 hsa-miR-6820-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6727-5p 1 0 0
chr6:116253457|116253599 hsa-miR-3622b-5p 1 0 0
chr6:116253457|116253599 hsa-miR-4655-5p 1 1 0
chr6:116253457|116253599 hsa-miR-3682-3p 0 1 0
chr6:116253457|116253599 hsa-miR-3605-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6716-5p 1 0 0
chr6:116253457|116253599 hsa-miR-3180-3p 1 1 0
chr6:116253457|116253599 hsa-miR-3190-3p 1 0 0
chr6:116253457|116253599 hsa-miR-6805-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6798-5p 1 0 0
chr6:116253457|116253599 hsa-miR-3126-5p 1 0 0
chr6:116253457|116253599 hsa-miR-486-3p 1 0 0
chr6:116253457|116253599 hsa-miR-6760-5p 1 1 0
chr6:116253457|116253599 hsa-miR-2467-3p 1 0 0
chr6:116253457|116253599 hsa-miR-6782-5p 1 0 0
chr6:116253457|116253599 hsa-miR-5006-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6835-5p 1 0 0
chr6:116253457|116253599 hsa-miR-7109-5p 1 0 0
chr6:116253457|116253599 hsa-miR-193b-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6784-5p 1 0 0
chr6:116253457|116253599 hsa-miR-885-3p 1 0 0
chr6:116253457|116253599 hsa-miR-1908-5p 1 0 0
chr6:116253457|116253599 hsa-miR-296-3p 1 0 0
chr6:116253457|116253599 hsa-miR-4690-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6823-5p 1 0 0
chr6:116253457|116253599 hsa-miR-877-5p 1 0 0
chr6:116253457|116253599 hsa-miR-4446-3p 1 0 0
chr6:116253457|116253599 hsa-miR-149-3p 1 0 0
chr6:116253457|116253599 hsa-miR-6717-5p 1 1 0
chr6:116253457|116253599 hsa-miR-6830-5p 0 1 0
chr6:116253457|116253599 hsa-miR-6824-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6789-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6878-5p 0 1 0
chr6:116253457|116253599 hsa-miR-4638-5p 1 1 0
chr6:116253457|116253599 hsa-miR-6792-5p 1 0 0
chr6:116253457|116253599 hsa-miR-181d-3p 1 0 0
chr6:116253457|116253599 hsa-miR-10400-5p 1 0 0
chr6:116253457|116253599 hsa-miR-1207-5p 1 0 0
chr6:116253457|116253599 hsa-miR-4763-3p 1 1 0
chr6:116253457|116253599 hsa-miR-6787-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6812-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6816-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6870-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6893-5p 1 0 0
chr6:116253457|116253599 hsa-miR-3180 1 0 0
chr6:116253457|116253599 hsa-miR-6737-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6743-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6754-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6756-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6813-5p 1 1 0
chr6:116253457|116253599 hsa-miR-6815-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6819-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6851-5p 1 0 0
chr6:116253457|116253599 hsa-miR-11181-3p 1 0 0
chr6:116253457|116253599 hsa-miR-1249-5p 1 1 0
chr6:116253457|116253599 hsa-miR-6722-3p 1 1 0
chr6:116253457|116253599 hsa-miR-6779-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6780a-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6788-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6797-5p 1 1 0
chr6:116253457|116253599 hsa-miR-6808-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6875-5p 1 0 0
chr6:116253457|116253599 hsa-miR-7111-5p 1 1 0
chr6:116253457|116253599 hsa-miR-4728-5p 1 1 0
chr6:116253457|116253599 hsa-miR-5196-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6780b-5p 1 1 0
chr6:116253457|116253599 hsa-miR-6836-5p 1 0 0
chr6:116253457|116253599 hsa-miR-10526-3p 1 0 0
chr6:116253457|116253599 hsa-miR-1237-5p 1 0 0
chr6:116253457|116253599 hsa-miR-1909-3p 1 1 0
chr6:116253457|116253599 hsa-miR-449c-5p 1 0 0
chr6:116253457|116253599 hsa-miR-4649-5p 1 0 0
chr6:116253457|116253599 hsa-miR-4725-3p 1 0 0
chr6:116253457|116253599 hsa-miR-4749-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6729-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6777-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6794-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6795-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6846-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6848-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6858-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6883-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6887-5p 1 0 0
chr6:116253457|116253599 hsa-miR-3187-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6831-5p 1 0 0
chr6:116253457|116253599 hsa-miR-1910-3p 1 0 0
chr6:116253457|116253599 hsa-miR-6511a-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6731-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6758-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6856-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6855-5p 1 0 0
chr6:116253457|116253599 hsa-miR-3173-3p 1 1 0
chr6:116253457|116253599 hsa-miR-4646-5p 1 0 0
chr6:116253457|116253599 hsa-miR-4747-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6876-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6891-5p 1 1 0
chr6:116253457|116253599 hsa-miR-4716-3p 1 0 0
chr6:116253457|116253599 hsa-miR-6785-5p 1 0 0
chr6:116253457|116253599 hsa-miR-6849-5p 1 0 0
chr6:116253457|116253599 hsa-miR-769-3p 1 0 0
chr6:116253457|116253599 hsa-miR-9851-3p 1 0 0
chr6:116253457|116253599 hsa-miR-6838-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:116253457|116253599
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MHYLLFLHRRPCFSLLFHCCRDGAFFSRHFLGLLPRYHLRPQA
Nucleotide Sequence CTGCACTACCTTCTTTTCCTCCATCGCCGCCCCTGCTTCTCCCTCCTTTTCCACTGCTGCCGAGATGGCGCGTTTTTTAGTCGTCACTTCCTTGGCCTTCTTCCCCGGTATCATCTGAGACCCCAAGCC
CircID chr6:116253457|116253599
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MGSQMIPGKKAKEVTTKKRAISAAVEKEGEAGAAMEEKKVVQKEKK
Nucleotide Sequence TTGGGGTCTCAGATGATACCGGGGAAGAAGGCCAAGGAAGTGACGACTAAAAAACGCGCCATCTCGGCAGCAGTGGAAAAGGAGGGAGAAGCAGGGGCGGCGATGGAGGAAAAGAAGGTAGTGCAGAAGGAAAAAAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab