CircRNA Information

General Information
circRNA Basic Information
CircID chr6:121447625|121447934
Strand -
CircType exon
Host Gene ENSG00000152661.7;
Algorism CIRI2;
Sequence TGTGGGTCTCAAAAATATGCTTATTTCAATGGCTGCTCCTCACCAACCGCTCCCCTCTCGCCTATGTCTCCTCCTGGGTACAAGCTGGTTACTGGCGACAGAAACAATTCTTCTTGCCGCAATTACAACAAGCAAGCAAGTGAGCAAAACTGGGCTAATTACAGTGCAGAACAAAATCGAATGGGGCAGGCGGGAAGCACCATCTCTAACTCCCATGCACAGCCTTTTGATTTCCCCGATGATAACCAGAATTCTAAAAAACTAGCTGCTGGACATGAATTACAGCCACTAGCCATTGTGGACCAGCGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:121447625|121447934 hsa-miR-31-5p 0 0 1
chr6:121447625|121447934 hsa-miR-31-3p 0 0 1
chr6:121447625|121447934 hsa-miR-198 0 0 1
chr6:121447625|121447934 hsa-miR-375-5p 0 0 1
chr6:121447625|121447934 hsa-miR-375-3p 0 0 1
chr6:121447625|121447934 hsa-miR-646 0 0 1
chr6:121447625|121447934 hsa-miR-765 1 1 1
chr6:121447625|121447934 hsa-miR-665 1 0 1
chr6:121447625|121447934 hsa-miR-939-5p 0 0 1
chr6:121447625|121447934 hsa-miR-939-3p 0 0 1
chr6:121447625|121447934 hsa-miR-1178-5p 0 0 1
chr6:121447625|121447934 hsa-miR-1178-3p 0 0 1
chr6:121447625|121447934 hsa-miR-1303 0 1 1
chr6:121447625|121447934 hsa-miR-302f 0 0 1
chr6:121447625|121447934 hsa-miR-769-5p 0 0 1
chr6:121447625|121447934 hsa-miR-542-5p 0 0 1
chr6:121447625|121447934 hsa-miR-338-3p 0 0 1
chr6:121447625|121447934 hsa-miR-324-3p 0 0 1
chr6:121447625|121447934 hsa-miR-516a-3p 0 0 1
chr6:121447625|121447934 hsa-miR-219-2-3p 0 0 1
chr6:121447625|121447934 hsa-miR-544 0 0 1
chr6:121447625|121447934 hsa-miR-203 0 0 1
chr6:121447625|121447934 hsa-miR-768-3p 0 0 1
chr6:121447625|121447934 hsa-miR-544a 0 1 0
chr6:121447625|121447934 hsa-miR-602 1 0 0
chr6:121447625|121447934 hsa-miR-920 1 0 0
chr6:121447625|121447934 hsa-miR-1202 1 0 0
chr6:121447625|121447934 hsa-miR-1268a 1 0 0
chr6:121447625|121447934 hsa-miR-1913 0 1 0
chr6:121447625|121447934 hsa-miR-711 1 1 0
chr6:121447625|121447934 hsa-miR-3154 1 0 0
chr6:121447625|121447934 hsa-miR-3196 1 0 0
chr6:121447625|121447934 hsa-miR-3197 1 0 0
chr6:121447625|121447934 hsa-miR-3652 1 0 0
chr6:121447625|121447934 hsa-miR-1268b 1 0 0
chr6:121447625|121447934 hsa-miR-4430 1 0 0
chr6:121447625|121447934 hsa-miR-4460 0 1 0
chr6:121447625|121447934 hsa-miR-4479 1 0 0
chr6:121447625|121447934 hsa-miR-4488 1 0 0
chr6:121447625|121447934 hsa-miR-2392 1 0 0
chr6:121447625|121447934 hsa-miR-4530 1 0 0
chr6:121447625|121447934 hsa-miR-4656 1 0 0
chr6:121447625|121447934 hsa-miR-4675 0 1 0
chr6:121447625|121447934 hsa-miR-4688 1 0 0
chr6:121447625|121447934 hsa-miR-4689 1 1 0
chr6:121447625|121447934 hsa-miR-4706 1 0 0
chr6:121447625|121447934 hsa-miR-4710 1 1 0
chr6:121447625|121447934 hsa-miR-4739 1 0 0
chr6:121447625|121447934 hsa-miR-5194 1 0 0
chr6:121447625|121447934 hsa-miR-5698 1 0 0
chr6:121447625|121447934 hsa-miR-6081 1 0 0
chr6:121447625|121447934 hsa-miR-6086 1 0 0
chr6:121447625|121447934 hsa-miR-6090 1 0 0
chr6:121447625|121447934 hsa-miR-6131 1 0 0
chr6:121447625|121447934 hsa-miR-6133 1 0 0
chr6:121447625|121447934 hsa-miR-6165 1 0 0
chr6:121447625|121447934 hsa-miR-7974 1 1 0
chr6:121447625|121447934 hsa-miR-8085 1 0 0
chr6:121447625|121447934 hsa-miR-12115 1 0 0
chr6:121447625|121447934 hsa-miR-12131 1 0 0
chr6:121447625|121447934 hsa-miR-138-5p 0 1 0
chr6:121447625|121447934 hsa-miR-4433b-3p 1 0 0
chr6:121447625|121447934 hsa-miR-6734-5p 1 0 0
chr6:121447625|121447934 hsa-miR-1247-3p 1 0 0
chr6:121447625|121447934 hsa-miR-6747-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4433a-3p 1 0 0
chr6:121447625|121447934 hsa-miR-7106-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6825-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6894-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4687-3p 1 0 0
chr6:121447625|121447934 hsa-miR-125a-3p 1 0 0
chr6:121447625|121447934 hsa-miR-25-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6854-5p 0 1 0
chr6:121447625|121447934 hsa-miR-6510-5p 1 0 0
chr6:121447625|121447934 hsa-miR-139-3p 1 0 0
chr6:121447625|121447934 hsa-miR-4695-5p 1 1 0
chr6:121447625|121447934 hsa-miR-4653-3p 0 1 0
chr6:121447625|121447934 hsa-miR-6727-5p 1 0 0
chr6:121447625|121447934 hsa-miR-3622b-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6806-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4655-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6716-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6871-5p 1 1 0
chr6:121447625|121447934 hsa-miR-3180-3p 1 0 0
chr6:121447625|121447934 hsa-miR-6805-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6798-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4793-3p 1 1 0
chr6:121447625|121447934 hsa-miR-3150b-3p 0 1 0
chr6:121447625|121447934 hsa-miR-7855-5p 0 1 0
chr6:121447625|121447934 hsa-miR-7109-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4707-3p 1 0 0
chr6:121447625|121447934 hsa-miR-885-3p 1 0 0
chr6:121447625|121447934 hsa-miR-1908-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4445-5p 0 1 0
chr6:121447625|121447934 hsa-miR-4756-3p 1 0 0
chr6:121447625|121447934 hsa-miR-92b-5p 1 0 0
chr6:121447625|121447934 hsa-miR-149-3p 1 0 0
chr6:121447625|121447934 hsa-miR-6824-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6800-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6802-5p 1 0 0
chr6:121447625|121447934 hsa-miR-423-5p 1 0 0
chr6:121447625|121447934 hsa-miR-106b-3p 1 0 0
chr6:121447625|121447934 hsa-miR-6801-5p 1 0 0
chr6:121447625|121447934 hsa-miR-551b-5p 0 1 0
chr6:121447625|121447934 hsa-miR-4485-5p 0 1 0
chr6:121447625|121447934 hsa-miR-1537-5p 0 1 0
chr6:121447625|121447934 hsa-miR-744-3p 0 1 0
chr6:121447625|121447934 hsa-miR-4763-3p 1 0 0
chr6:121447625|121447934 hsa-miR-6769b-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6870-5p 1 0 0
chr6:121447625|121447934 hsa-miR-1343-5p 1 1 0
chr6:121447625|121447934 hsa-miR-6726-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6756-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6803-5p 1 0 0
chr6:121447625|121447934 hsa-miR-1249-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6751-5p 1 1 0
chr6:121447625|121447934 hsa-miR-6763-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6788-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6797-5p 1 0 0
chr6:121447625|121447934 hsa-miR-7111-5p 1 0 0
chr6:121447625|121447934 hsa-miR-1915-3p 1 0 0
chr6:121447625|121447934 hsa-miR-4728-5p 1 0 0
chr6:121447625|121447934 hsa-miR-5196-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6780b-5p 1 0 0
chr6:121447625|121447934 hsa-miR-1237-5p 1 0 0
chr6:121447625|121447934 hsa-miR-328-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4632-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4649-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4726-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4745-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6729-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6738-5p 1 0 0
chr6:121447625|121447934 hsa-miR-675-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6777-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6794-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6795-5p 1 1 0
chr6:121447625|121447934 hsa-miR-6846-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6848-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6858-5p 1 1 0
chr6:121447625|121447934 hsa-miR-6883-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6887-5p 1 1 0
chr6:121447625|121447934 hsa-miR-4697-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4723-5p 1 1 0
chr6:121447625|121447934 hsa-miR-6885-5p 1 0 0
chr6:121447625|121447934 hsa-miR-4758-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6758-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6856-5p 1 0 0
chr6:121447625|121447934 hsa-miR-1914-3p 1 0 0
chr6:121447625|121447934 hsa-miR-3173-3p 1 0 0
chr6:121447625|121447934 hsa-miR-6785-5p 1 0 0
chr6:121447625|121447934 hsa-miR-1185-1-3p 1 0 0
chr6:121447625|121447934 hsa-miR-1185-2-3p 1 0 0
chr6:121447625|121447934 hsa-miR-4667-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6791-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6762-5p 1 0 0
chr6:121447625|121447934 hsa-miR-323b-5p 1 0 0
chr6:121447625|121447934 hsa-miR-6807-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:121447625|121447934
ORF Type ORF1
Protein Length 82
Nucleotide Length 246
Protein Sequence MSPPGYKLVTGDRNNSSCRNYNKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFPDDNQNSKKLAAGHELQPLAIVDQR
Nucleotide Sequence ATGTCTCCTCCTGGGTACAAGCTGGTTACTGGCGACAGAAACAATTCTTCTTGCCGCAATTACAACAAGCAAGCAAGTGAGCAAAACTGGGCTAATTACAGTGCAGAACAAAATCGAATGGGGCAGGCGGGAAGCACCATCTCTAACTCCCATGCACAGCCTTTTGATTTCCCCGATGATAACCAGAATTCTAAAAAACTAGCTGCTGGACATGAATTACAGCCACTAGCCATTGTGGACCAGCGA
CircID chr6:121447625|121447934
ORF Type ORF2
Protein Length 82
Nucleotide Length 249
Protein Sequence MLISMAAPHQPLPSRLCLLLGTSWLLATETILLAAITTSKQVSKTGLITVQNKIEWGRREAPSLTPMHSLLISPMITRILKN
Nucleotide Sequence ATGCTTATTTCAATGGCTGCTCCTCACCAACCGCTCCCCTCTCGCCTATGTCTCCTCCTGGGTACAAGCTGGTTACTGGCGACAGAAACAATTCTTCTTGCCGCAATTACAACAAGCAAGCAAGTGAGCAAAACTGGGCTAATTACAGTGCAGAACAAAATCGAATGGGGCAGGCGGGAAGCACCATCTCTAACTCCCATGCACAGCCTTTTGATTTCCCCGATGATAACCAGAATTCTAAAAAACTAG
CircID chr6:121447625|121447934
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MLLTNRSPLAYVSSWVQAGYWRQKQFFLPQLQQASK
Nucleotide Sequence CTGCTCCTCACCAACCGCTCCCCTCTCGCCTATGTCTCCTCCTGGGTACAAGCTGGTTACTGGCGACAGAAACAATTCTTCTTGCCGCAATTACAACAAGCAAGCAAGTGA
CircID chr6:121447625|121447934
ORF Type ORF4
Protein Length 69
Nucleotide Length 210
Protein Sequence MVIIGEIKRLCMGVRDGASRLPHSILFCTVISPVLLTCLLVVIAARRIVSVASNQLVPRRRHRREGSGW
Nucleotide Sequence CTGGTTATCATCGGGGAAATCAAAAGGCTGTGCATGGGAGTTAGAGATGGTGCTTCCCGCCTGCCCCATTCGATTTTGTTCTGCACTGTAATTAGCCCAGTTTTGCTCACTTGCTTGCTTGTTGTAATTGCGGCAAGAAGAATTGTTTCTGTCGCCAGTAACCAGCTTGTACCCAGGAGGAGACATAGGCGAGAGGGGAGCGGTTGGTGA
CircID chr6:121447625|121447934
ORF Type ORF5
Protein Length 45
Nucleotide Length 138
Protein Sequence MASGCNSCPAASFLEFWLSSGKSKGCAWELEMVLPACPIRFCSAL
Nucleotide Sequence ATGGCTAGTGGCTGTAATTCATGTCCAGCAGCTAGTTTTTTAGAATTCTGGTTATCATCGGGGAAATCAAAAGGCTGTGCATGGGAGTTAGAGATGGTGCTTCCCGCCTGCCCCATTCGATTTTGTTCTGCACTGTAA
CircID chr6:121447625|121447934
ORF Type ORF6
Protein Length 33
Nucleotide Length 102
Protein Sequence MRQEELFLSPVTSLYPGGDIGERGAVGEEQPLK
Nucleotide Sequence TTGCGGCAAGAAGAATTGTTTCTGTCGCCAGTAACCAGCTTGTACCCAGGAGGAGACATAGGCGAGAGGGGAGCGGTTGGTGAGGAGCAGCCATTGAAATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab