CircNet

General Information

circRNA Basic Information

CircID	chr6:129143901\|129154683
Strand	+
CircType	exon
Host Gene	ENSG00000196569.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATTCACATCTCTTTAATCAATGGGAGACCAAGTGCCGATGATCCTTCTCCAGAACTGCTAGAATTTACCTCCGCTCGCTATATTCGCCTGAGATTTCAGAGGATCCGCACACTGAATGCTGACTTGATGATGTTTGCTCACAAAGACCCAAGAGAAATTGACCCCATTGTCACCAGAAGATATTACTACTCGGTCAAGGATATTTCAGTTGGAGGGATGTGCATCTGCTATGGTCATGCCAGGGCTTGTCCACTTGATCCAGCGACAAATAAATCTCGCTGTGAGTGTGAGCATAACACATGTGGCGATAGCTGTGATCAGTGCTGTCCAGGATTCCATCAGAAACCCTGGAGAGCTGGAACTTTTCTAACTAAAACTGAATGTGAAGCATGCAATTGTCATGGAAAAGCTGAAGAATGCTATTATGATGAAAATGTTGCCAGAAGAAATCTGAGTTTGAATATACGTGGAAAGTACATTGGAGGGGGTGTCTGCATTAATTGTACCCAAAACACTGCTGGTATAAACTGCGAGACATGTACTGATGGCTTCTTCAGACCCAAAGGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:129143901\|129154683	hsa-miR-658	1	1	1
chr6:129143901\|129154683	hsa-miR-3937	1	1	1
chr6:129143901\|129154683	hsa-miR-146a-3p	1	1	1
chr6:129143901\|129154683	hsa-miR-127-3p	1	1	1
chr6:129143901\|129154683	hsa-miR-193a-5p	1	1	1
chr6:129143901\|129154683	hsa-miR-7846-3p	1	1	1
chr6:129143901\|129154683	hsa-miR-6887-3p	1	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:129143901\|129154683
ORF Type	ORF1
Protein Length	147
Nucleotide Length	441
Protein Sequence	MMFAHKDPREIDPIVTRRYYYSVKDISVGGMCICYGHARACPLDPATNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRPKG
Nucleotide Sequence	ATGATGTTTGCTCACAAAGACCCAAGAGAAATTGACCCCATTGTCACCAGAAGATATTACTACTCGGTCAAGGATATTTCAGTTGGAGGGATGTGCATCTGCTATGGTCATGCCAGGGCTTGTCCACTTGATCCAGCGACAAATAAATCTCGCTGTGAGTGTGAGCATAACACATGTGGCGATAGCTGTGATCAGTGCTGTCCAGGATTCCATCAGAAACCCTGGAGAGCTGGAACTTTTCTAACTAAAACTGAATGTGAAGCATGCAATTGTCATGGAAAAGCTGAAGAATGCTATTATGATGAAAATGTTGCCAGAAGAAATCTGAGTTTGAATATACGTGGAAAGTACATTGGAGGGGGTGTCTGCATTAATTGTACCCAAAACACTGCTGGTATAAACTGCGAGACATGTACTGATGGCTTCTTCAGACCCAAAGGG

CircID	chr6:129143901\|129154683
ORF Type	ORF2
Protein Length	47
Nucleotide Length	141
Protein Sequence	MVMPGLVHLIQRQINLAVSVSITHVAIAVISAVQDSIRNPGELELF*
Nucleotide Sequence	ATGGTCATGCCAGGGCTTGTCCACTTGATCCAGCGACAAATAAATCTCGCTGTGAGTGTGAGCATAACACATGTGGCGATAGCTGTGATCAGTGCTGTCCAGGATTCCATCAGAAACCCTGGAGAGCTGGAACTTTTCTAA

CircID	chr6:129143901\|129154683
ORF Type	ORF3
Protein Length	45
Nucleotide Length	135
Protein Sequence	MESWTALITAIATCVMLTLTARFICRWIKWTSPGMTIADAHPSN*
Nucleotide Sequence	ATGGAATCCTGGACAGCACTGATCACAGCTATCGCCACATGTGTTATGCTCACACTCACAGCGAGATTTATTTGTCGCTGGATCAAGTGGACAAGCCCTGGCATGACCATAGCAGATGCACATCCCTCCAACTGA

CircID	chr6:129143901\|129154683
ORF Type	ORF4
Protein Length	36
Nucleotide Length	108
Protein Sequence	MCYAHTHSEIYLSLDQVDKPWHDHSRCTSLQLKYP*
Nucleotide Sequence	ATGTGTTATGCTCACACTCACAGCGAGATTTATTTGTCGCTGGATCAAGTGGACAAGCCCTGGCATGACCATAGCAGATGCACATCCCTCCAACTGAAATATCCTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:129143901\|129154683	ELAVL1	1	0	0
chr6:129143901\|129154683	TAF15	2	0	0
chr6:129143901\|129154683	DICER1	1	0	0
chr6:129143901\|129154683	NOP58	0	0	1
chr6:129143901\|129154683	CSTF2	7	2	0
chr6:129143901\|129154683	WDR33	1	0	0
chr6:129143901\|129154683	FUS	1	0	0

CircRNA Information