CircRNA Information

General Information
circRNA Basic Information
CircID chr6:134173123|134173336
Strand -
CircType exon
Host Gene ENSG00000118515.10;
Algorism CIRI2;
Sequence AGAACATTCCGCTCCGACATAATATGCTTCTCCTAGGAAAATGACGATTCAGATTTAGTGGCATGTTTCAACTTGGCACCAACATTCCAGAATCAAGATTATTCAAGGAGTGTCTACCGCCAATGCCAGCCCCATCAAGCACATCTCATACCTCTTTCTTTTTCAGGATTGCTTTCTTCTGTAAAACTTTGACTGCATAGAACACTTCTTCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:134173123|134173336 hsa-miR-143-5p 0 0 1
chr6:134173123|134173336 hsa-miR-143-3p 0 0 1
chr6:134173123|134173336 hsa-miR-206 0 0 1
chr6:134173123|134173336 hsa-miR-379-5p 0 0 1
chr6:134173123|134173336 hsa-miR-379-3p 0 0 1
chr6:134173123|134173336 hsa-miR-384 0 0 1
chr6:134173123|134173336 hsa-miR-202-5p 0 0 1
chr6:134173123|134173336 hsa-miR-202-3p 0 0 1
chr6:134173123|134173336 hsa-miR-494-5p 0 0 1
chr6:134173123|134173336 hsa-miR-494-3p 0 0 1
chr6:134173123|134173336 hsa-miR-520g-5p 0 0 1
chr6:134173123|134173336 hsa-miR-520g-3p 0 0 1
chr6:134173123|134173336 hsa-miR-520h 0 0 1
chr6:134173123|134173336 hsa-miR-561-5p 0 0 1
chr6:134173123|134173336 hsa-miR-561-3p 0 0 1
chr6:134173123|134173336 hsa-miR-583 0 0 1
chr6:134173123|134173336 hsa-miR-613 0 0 1
chr6:134173123|134173336 hsa-miR-636 0 0 1
chr6:134173123|134173336 hsa-miR-656-5p 0 0 1
chr6:134173123|134173336 hsa-miR-656-3p 0 0 1
chr6:134173123|134173336 hsa-miR-298 0 1 1
chr6:134173123|134173336 hsa-miR-1299 0 1 1
chr6:134173123|134173336 hsa-miR-1256 0 0 1
chr6:134173123|134173336 hsa-miR-576-3p 0 0 1
chr6:134173123|134173336 hsa-miR-875-3p 0 0 1
chr6:134173123|134173336 hsa-miR-409-3p 0 0 1
chr6:134173123|134173336 hsa-miR-483-3p 0 0 1
chr6:134173123|134173336 hsa-miR-218 0 0 1
chr6:134173123|134173336 hsa-miR-1 0 0 1
chr6:134173123|134173336 hsa-miR-516b 0 0 1
chr6:134173123|134173336 hsa-miR-2861 1 0 0
chr6:134173123|134173336 hsa-miR-3185 1 1 0
chr6:134173123|134173336 hsa-miR-3936 1 0 0
chr6:134173123|134173336 hsa-miR-4498 0 1 0
chr6:134173123|134173336 hsa-miR-4516 1 0 0
chr6:134173123|134173336 hsa-miR-4689 1 0 0
chr6:134173123|134173336 hsa-miR-6088 1 0 0
chr6:134173123|134173336 hsa-miR-6124 1 1 0
chr6:134173123|134173336 hsa-miR-6128 0 1 0
chr6:134173123|134173336 hsa-miR-4433b-3p 1 0 0
chr6:134173123|134173336 hsa-miR-6799-5p 1 0 0
chr6:134173123|134173336 hsa-miR-766-5p 1 0 0
chr6:134173123|134173336 hsa-miR-139-3p 1 0 0
chr6:134173123|134173336 hsa-miR-7851-3p 1 0 0
chr6:134173123|134173336 hsa-miR-3192-5p 1 0 0
chr6:134173123|134173336 hsa-miR-6730-5p 1 0 0
chr6:134173123|134173336 hsa-miR-185-3p 1 1 0
chr6:134173123|134173336 hsa-miR-6821-5p 1 0 0
chr6:134173123|134173336 hsa-miR-6786-5p 1 0 0
chr6:134173123|134173336 hsa-miR-5187-3p 0 1 0
chr6:134173123|134173336 hsa-miR-296-3p 1 0 0
chr6:134173123|134173336 hsa-let-7b-5p 1 0 0
chr6:134173123|134173336 hsa-let-7i-5p 1 0 0
chr6:134173123|134173336 hsa-let-7e-5p 1 0 0
chr6:134173123|134173336 hsa-miR-5571-3p 0 1 0
chr6:134173123|134173336 hsa-miR-5001-5p 1 1 0
chr6:134173123|134173336 hsa-miR-6756-5p 1 0 0
chr6:134173123|134173336 hsa-miR-10526-3p 1 0 0
chr6:134173123|134173336 hsa-miR-4725-3p 1 0 0
chr6:134173123|134173336 hsa-miR-6846-5p 1 1 0
chr6:134173123|134173336 hsa-miR-6848-5p 1 0 0
chr6:134173123|134173336 hsa-miR-3085-5p 0 1 0
chr6:134173123|134173336 hsa-miR-6758-5p 1 0 0
chr6:134173123|134173336 hsa-miR-6856-5p 1 0 0
chr6:134173123|134173336 hsa-miR-6891-5p 1 0 0
chr6:134173123|134173336 hsa-miR-9851-5p 1 1 0
chr6:134173123|134173336 hsa-miR-5588-5p 0 1 0
chr6:134173123|134173336 hsa-miR-4720-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:134173123|134173336
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MAPTFQNQDYSRSVYRQCQPHQAHLIPLSFSGLLSSVKL
Nucleotide Sequence TTGGCACCAACATTCCAGAATCAAGATTATTCAAGGAGTGTCTACCGCCAATGCCAGCCCCATCAAGCACATCTCATACCTCTTTCTTTTTCAGGATTGCTTTCTTCTGTAAAACTTTGA

CircID chr6:134173123|134173336
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MFQLGTNIPESRLFKECLPPMPAPSSTSHTSFFFRIAFFCKTLTA
Nucleotide Sequence ATGTTTCAACTTGGCACCAACATTCCAGAATCAAGATTATTCAAGGAGTGTCTACCGCCAATGCCAGCCCCATCAAGCACATCTCATACCTCTTTCTTTTTCAGGATTGCTTTCTTCTGTAAAACTTTGACTGCATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites