CircRNA Information

General Information
circRNA Basic Information
CircID chr6:136360697|136361049
Strand -
CircType exon
Host Gene ENSG00000135525.17;
Algorism CIRI2;
Sequence CTTCTTTCTCTCCAGGCGCTCTTGCTCTTCTCTCTGGAAATGCTTCTCTCGTTCCTGCCGGACCCTCTCTGCTTCTTCACGAACGCGAGCTTCTTCTTCTTTCTGCCTCTGGGCGCGCTCTGCCTCCTCCCGCTCGCGCAGCGCCCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:136360697|136361049 hsa-miR-136-5p 0 0 1
chr6:136360697|136361049 hsa-miR-136-3p 0 0 1
chr6:136360697|136361049 hsa-miR-185-5p 0 0 1
chr6:136360697|136361049 hsa-miR-185-3p 0 0 1
chr6:136360697|136361049 hsa-miR-326 0 1 1
chr6:136360697|136361049 hsa-miR-335-5p 0 0 1
chr6:136360697|136361049 hsa-miR-335-3p 0 0 1
chr6:136360697|136361049 hsa-miR-422a 0 0 1
chr6:136360697|136361049 hsa-miR-612 0 1 1
chr6:136360697|136361049 hsa-miR-650 1 1 1
chr6:136360697|136361049 hsa-miR-765 0 1 1
chr6:136360697|136361049 hsa-miR-675-5p 0 0 1
chr6:136360697|136361049 hsa-miR-675-3p 0 0 1
chr6:136360697|136361049 hsa-miR-873-5p 0 0 1
chr6:136360697|136361049 hsa-miR-873-3p 0 0 1
chr6:136360697|136361049 hsa-miR-922 0 0 1
chr6:136360697|136361049 hsa-miR-1228-5p 0 0 1
chr6:136360697|136361049 hsa-miR-1228-3p 0 0 1
chr6:136360697|136361049 hsa-miR-1237-5p 0 0 1
chr6:136360697|136361049 hsa-miR-1237-3p 0 0 1
chr6:136360697|136361049 hsa-miR-1253 0 1 1
chr6:136360697|136361049 hsa-miR-1288-5p 0 0 1
chr6:136360697|136361049 hsa-miR-1288-3p 0 0 1
chr6:136360697|136361049 hsa-miR-1827 0 0 1
chr6:136360697|136361049 hsa-miR-139-3p 1 1 1
chr6:136360697|136361049 hsa-miR-525-5p 0 1 1
chr6:136360697|136361049 hsa-miR-339-3p 0 1 1
chr6:136360697|136361049 hsa-miR-1224-3p 0 1 1
chr6:136360697|136361049 hsa-miR-331-3p 0 0 1
chr6:136360697|136361049 hsa-miR-520a-5p 0 1 1
chr6:136360697|136361049 hsa-miR-330-5p 0 0 1
chr6:136360697|136361049 hsa-miR-515-5p 0 0 1
chr6:136360697|136361049 hsa-miR-378 0 0 1
chr6:136360697|136361049 hsa-miR-1269 0 0 1
chr6:136360697|136361049 hsa-miR-138 0 0 1
chr6:136360697|136361049 hsa-miR-1285 0 0 1
chr6:136360697|136361049 hsa-miR-1254 0 0 1
chr6:136360697|136361049 hsa-miR-198 1 1 0
chr6:136360697|136361049 hsa-miR-637 1 0 0
chr6:136360697|136361049 hsa-miR-764 1 0 0
chr6:136360697|136361049 hsa-miR-298 1 1 0
chr6:136360697|136361049 hsa-miR-940 1 0 0
chr6:136360697|136361049 hsa-miR-1182 1 1 0
chr6:136360697|136361049 hsa-miR-1291 0 1 0
chr6:136360697|136361049 hsa-miR-1269a 0 1 0
chr6:136360697|136361049 hsa-miR-1538 1 1 0
chr6:136360697|136361049 hsa-miR-2861 1 0 0
chr6:136360697|136361049 hsa-miR-3125 1 0 0
chr6:136360697|136361049 hsa-miR-3147 1 0 0
chr6:136360697|136361049 hsa-miR-3154 1 0 0
chr6:136360697|136361049 hsa-miR-3185 1 1 0
chr6:136360697|136361049 hsa-miR-3197 1 0 0
chr6:136360697|136361049 hsa-miR-4306 0 1 0
chr6:136360697|136361049 hsa-miR-3665 0 1 0
chr6:136360697|136361049 hsa-miR-3907 1 1 0
chr6:136360697|136361049 hsa-miR-1268b 1 0 0
chr6:136360697|136361049 hsa-miR-4458 0 1 0
chr6:136360697|136361049 hsa-miR-378h 0 1 0
chr6:136360697|136361049 hsa-miR-4466 0 1 0
chr6:136360697|136361049 hsa-miR-4479 1 0 0
chr6:136360697|136361049 hsa-miR-4496 1 0 0
chr6:136360697|136361049 hsa-miR-4498 1 0 0
chr6:136360697|136361049 hsa-miR-4515 0 1 0
chr6:136360697|136361049 hsa-miR-4516 1 0 0
chr6:136360697|136361049 hsa-miR-4530 1 0 0
chr6:136360697|136361049 hsa-miR-4644 0 1 0
chr6:136360697|136361049 hsa-miR-4656 1 0 0
chr6:136360697|136361049 hsa-miR-4669 1 0 0
chr6:136360697|136361049 hsa-miR-4706 1 0 0
chr6:136360697|136361049 hsa-miR-4739 1 1 0
chr6:136360697|136361049 hsa-miR-4754 0 1 0
chr6:136360697|136361049 hsa-miR-5090 1 0 0
chr6:136360697|136361049 hsa-miR-5685 0 1 0
chr6:136360697|136361049 hsa-miR-6081 1 0 0
chr6:136360697|136361049 hsa-miR-6085 1 0 0
chr6:136360697|136361049 hsa-miR-6165 1 0 0
chr6:136360697|136361049 hsa-miR-7150 1 0 0
chr6:136360697|136361049 hsa-miR-7704 1 0 0
chr6:136360697|136361049 hsa-miR-8072 1 0 0
chr6:136360697|136361049 hsa-miR-8073 1 0 0
chr6:136360697|136361049 hsa-miR-8089 1 0 0
chr6:136360697|136361049 hsa-miR-9899 1 0 0
chr6:136360697|136361049 hsa-miR-12120 1 0 0
chr6:136360697|136361049 hsa-miR-127-5p 1 0 0
chr6:136360697|136361049 hsa-miR-138-5p 1 0 0
chr6:136360697|136361049 hsa-miR-4747-3p 0 1 0
chr6:136360697|136361049 hsa-miR-4665-3p 1 0 0
chr6:136360697|136361049 hsa-miR-6765-5p 1 0 0
chr6:136360697|136361049 hsa-miR-671-5p 1 0 0
chr6:136360697|136361049 hsa-miR-7106-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6894-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6799-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6510-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6804-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6089 1 0 0
chr6:136360697|136361049 hsa-miR-3192-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6880-5p 1 0 0
chr6:136360697|136361049 hsa-miR-4695-5p 1 1 0
chr6:136360697|136361049 hsa-miR-6746-5p 1 0 0
chr6:136360697|136361049 hsa-miR-4722-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6820-5p 1 0 0
chr6:136360697|136361049 hsa-miR-874-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6840-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6842-3p 1 0 0
chr6:136360697|136361049 hsa-miR-874-3p 1 0 0
chr6:136360697|136361049 hsa-miR-1915-5p 1 0 0
chr6:136360697|136361049 hsa-miR-3663-5p 1 0 0
chr6:136360697|136361049 hsa-miR-1292-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6793-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6732-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6760-5p 1 1 0
chr6:136360697|136361049 hsa-miR-2467-3p 1 1 0
chr6:136360697|136361049 hsa-miR-6788-3p 0 1 0
chr6:136360697|136361049 hsa-miR-6772-3p 1 0 0
chr6:136360697|136361049 hsa-miR-6763-3p 0 1 0
chr6:136360697|136361049 hsa-miR-1908-3p 0 1 0
chr6:136360697|136361049 hsa-miR-6803-3p 1 0 0
chr6:136360697|136361049 hsa-miR-296-3p 1 0 0
chr6:136360697|136361049 hsa-miR-4783-5p 1 1 0
chr6:136360697|136361049 hsa-miR-4732-5p 1 0 0
chr6:136360697|136361049 hsa-miR-485-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6847-5p 0 1 0
chr6:136360697|136361049 hsa-miR-3648 1 0 0
chr6:136360697|136361049 hsa-miR-149-3p 1 0 0
chr6:136360697|136361049 hsa-miR-6886-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6877-5p 1 0 0
chr6:136360697|136361049 hsa-miR-7846-3p 1 0 0
chr6:136360697|136361049 hsa-miR-6813-3p 1 1 0
chr6:136360697|136361049 hsa-miR-4758-3p 1 1 0
chr6:136360697|136361049 hsa-miR-6801-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6752-3p 1 0 0
chr6:136360697|136361049 hsa-miR-6868-5p 1 1 0
chr6:136360697|136361049 hsa-miR-4529-3p 1 1 0
chr6:136360697|136361049 hsa-miR-1292-3p 1 0 0
chr6:136360697|136361049 hsa-miR-2277-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6880-3p 0 1 0
chr6:136360697|136361049 hsa-miR-1199-3p 0 1 0
chr6:136360697|136361049 hsa-miR-3620-3p 0 1 0
chr6:136360697|136361049 hsa-miR-99a-3p 1 0 0
chr6:136360697|136361049 hsa-miR-10400-5p 1 0 0
chr6:136360697|136361049 hsa-miR-1207-5p 1 1 0
chr6:136360697|136361049 hsa-miR-1233-5p 1 0 0
chr6:136360697|136361049 hsa-miR-4763-3p 1 0 0
chr6:136360697|136361049 hsa-miR-6778-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6787-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6893-5p 0 1 0
chr6:136360697|136361049 hsa-miR-1343-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6754-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6851-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6797-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6808-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6875-5p 1 0 0
chr6:136360697|136361049 hsa-miR-320a-5p 0 1 0
chr6:136360697|136361049 hsa-miR-4728-5p 1 0 0
chr6:136360697|136361049 hsa-miR-5189-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6836-5p 1 0 0
chr6:136360697|136361049 hsa-miR-4649-5p 1 0 0
chr6:136360697|136361049 hsa-miR-4726-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6794-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6846-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6848-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6883-5p 1 1 0
chr6:136360697|136361049 hsa-miR-3187-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6831-5p 1 1 0
chr6:136360697|136361049 hsa-miR-10394-3p 1 0 0
chr6:136360697|136361049 hsa-miR-1910-3p 0 1 0
chr6:136360697|136361049 hsa-miR-6511a-5p 1 1 0
chr6:136360697|136361049 hsa-miR-10396a-3p 0 1 0
chr6:136360697|136361049 hsa-miR-10396b-3p 0 1 0
chr6:136360697|136361049 hsa-miR-6758-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6856-5p 1 1 0
chr6:136360697|136361049 hsa-miR-1285-3p 0 1 0
chr6:136360697|136361049 hsa-miR-4665-5p 0 1 0
chr6:136360697|136361049 hsa-miR-3116 0 1 0
chr6:136360697|136361049 hsa-miR-6876-5p 1 0 0
chr6:136360697|136361049 hsa-miR-6791-5p 1 1 0
chr6:136360697|136361049 hsa-miR-550a-5p 0 1 0
chr6:136360697|136361049 hsa-miR-518e-5p 0 1 0
chr6:136360697|136361049 hsa-miR-519a-5p 0 1 0
chr6:136360697|136361049 hsa-miR-519b-5p 0 1 0
chr6:136360697|136361049 hsa-miR-519c-5p 0 1 0
chr6:136360697|136361049 hsa-miR-522-5p 0 1 0
chr6:136360697|136361049 hsa-miR-523-5p 0 1 0
chr6:136360697|136361049 hsa-miR-6862-3p 0 1 0
chr6:136360697|136361049 hsa-miR-10401-3p 1 1 0
chr6:136360697|136361049 hsa-miR-6775-3p 1 1 0
chr6:136360697|136361049 hsa-miR-10392-3p 1 1 0
chr6:136360697|136361049 hsa-miR-4690-3p 0 1 0
chr6:136360697|136361049 hsa-miR-99b-3p 1 1 0
chr6:136360697|136361049 hsa-miR-4724-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:136360697|136361049
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MLFSLEMLLSFLPDPLCFFTNASFFFFLPLGALCLLPLAQRP
Nucleotide Sequence TTGCTCTTCTCTCTGGAAATGCTTCTCTCGTTCCTGCCGGACCCTCTCTGCTTCTTCACGAACGCGAGCTTCTTCTTCTTTCTGCCTCTGGGCGCGCTCTGCCTCCTCCCGCTCGCGCAGCGCCCG
CircID chr6:136360697|136361049
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MLLHERELLLLSASGRALPPPARAAP
Nucleotide Sequence CTGCTTCTTCACGAACGCGAGCTTCTTCTTCTTTCTGCCTCTGGGCGCGCTCTGCCTCCTCCCGCTCGCGCAGCGCCC
CircID chr6:136360697|136361049
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MREREEAERAQRQKEEEARVREEAERVRQEREKHFQREEQERLERKK
Nucleotide Sequence CTGCGCGAGCGGGAGGAGGCAGAGCGCGCCCAGAGGCAGAAAGAAGAAGAAGCTCGCGTTCGTGAAGAAGCAGAGAGGGTCCGGCAGGAACGAGAGAAGCATTTCCAGAGAGAAGAGCAAGAGCGCCTGGAGAGAAAGAAG
CircID chr6:136360697|136361049
ORF Type ORF1
Protein Length 110
Nucleotide Length 330
Protein Sequence MLFSLEMLLSFLPDPLCFFTNASFFFFLKTEGRRLPLTNRRAARVSQGVPRGGGEVADGEGVESGSTSSPVRTLLCWAGASPCGTGAGARVGCGRTCLWARSASSRSRSA
Nucleotide Sequence TTGCTCTTCTCTCTGGAAATGCTTCTCTCGTTCCTGCCGGACCCTCTCTGCTTCTTCACGAACGCGAGCTTCTTCTTCTTTCTGAAAACAGAAGGTCGGCGTCTGCCTCTGACAAACAGGCGGGCTGCCCGGGTCTCCCAGGGGGTGCCCAGAGGTGGGGGCGAGGTGGCGGATGGAGAAGGTGTGGAAAGCGGGAGCACCAGCAGTCCAGTCCGCACCCTCCTCTGCTGGGCTGGGGCGTCTCCCTGCGGGACTGGGGCCGGGGCCAGGGTGGGGTGCGGCCGCACCTGCCTCTGGGCGCGCTCTGCCTCCTCCCGCTCGCGCAGCGCC
CircID chr6:136360697|136361049
ORF Type ORF2
Protein Length 69
Nucleotide Length 207
Protein Sequence MPGSPRGCPEVGARWRMEKVWKAGAPAVQSAPSSAGLGRLPAGLGPGPGWGAAAPASGRALPPPARAAP
Nucleotide Sequence CTGCCCGGGTCTCCCAGGGGGTGCCCAGAGGTGGGGGCGAGGTGGCGGATGGAGAAGGTGTGGAAAGCGGGAGCACCAGCAGTCCAGTCCGCACCCTCCTCTGCTGGGCTGGGGCGTCTCCCTGCGGGACTGGGGCCGGGGCCAGGGTGGGGTGCGGCCGCACCTGCCTCTGGGCGCGCTCTGCCTCCTCCCGCTCGCGCAGCGCCC
CircID chr6:136360697|136361049
ORF Type ORF3
Protein Length 95
Nucleotide Length 285
Protein Sequence MLLHERELLLLSENRRSASASDKQAGCPGLPGGAQRWGRGGGWRRCGKREHQQSSPHPPLLGWGVSLRDWGRGQGGVRPHLPLGALCLLPLAQRP
Nucleotide Sequence CTGCTTCTTCACGAACGCGAGCTTCTTCTTCTTTCTGAAAACAGAAGGTCGGCGTCTGCCTCTGACAAACAGGCGGGCTGCCCGGGTCTCCCAGGGGGTGCCCAGAGGTGGGGGCGAGGTGGCGGATGGAGAAGGTGTGGAAAGCGGGAGCACCAGCAGTCCAGTCCGCACCCTCCTCTGCTGGGCTGGGGCGTCTCCCTGCGGGACTGGGGCCGGGGCCAGGGTGGGGTGCGGCCGCACCTGCCTCTGGGCGCGCTCTGCCTCCTCCCGCTCGCGCAGCGCCCG
CircID chr6:136360697|136361049
ORF Type ORF4
Protein Length 115
Nucleotide Length 345
Protein Sequence MREREEAERAQRQVRPHPTLAPAPVPQGDAPAQQRRVRTGLLVLPLSTPSPSATSPPPLGTPWETRAARLFVRGRRRPSVFRKKKKLAFVKKQRGSGRNERSISREKSKSAWRER
Nucleotide Sequence CTGCGCGAGCGGGAGGAGGCAGAGCGCGCCCAGAGGCAGGTGCGGCCGCACCCCACCCTGGCCCCGGCCCCAGTCCCGCAGGGAGACGCCCCAGCCCAGCAGAGGAGGGTGCGGACTGGACTGCTGGTGCTCCCGCTTTCCACACCTTCTCCATCCGCCACCTCGCCCCCACCTCTGGGCACCCCCTGGGAGACCCGGGCAGCCCGCCTGTTTGTCAGAGGCAGACGCCGACCTTCTGTTTTCAGAAAGAAGAAGAAGCTCGCGTTCGTGAAGAAGCAGAGAGGGTCCGGCAGGAACGAGAGAAGCATTTCCAGAGAGAAGAGCAAGAGCGCCTGGAGAGAAAGA
CircID chr6:136360697|136361049
ORF Type ORF5
Protein Length 51
Nucleotide Length 156
Protein Sequence MDCWCSRFPHLLHPPPRPHLWAPPGRPGQPACLSEADADLLFSERRRSSRS
Nucleotide Sequence CTGGACTGCTGGTGCTCCCGCTTTCCACACCTTCTCCATCCGCCACCTCGCCCCCACCTCTGGGCACCCCCTGGGAGACCCGGGCAGCCCGCCTGTTTGTCAGAGGCAGACGCCGACCTTCTGTTTTCAGAAAGAAGAAGAAGCTCGCGTTCGTGA
CircID chr6:136360697|136361049
ORF Type ORF6
Protein Length 54
Nucleotide Length 162
Protein Sequence MGDPGSPPVCQRQTPTFCFQKEEEARVREEAERVRQEREKHFQREEQERLERKK
Nucleotide Sequence CTGGGAGACCCGGGCAGCCCGCCTGTTTGTCAGAGGCAGACGCCGACCTTCTGTTTTCAGAAAGAAGAAGAAGCTCGCGTTCGTGAAGAAGCAGAGAGGGTCCGGCAGGAACGAGAGAAGCATTTCCAGAGAGAAGAGCAAGAGCGCCTGGAGAGAAAGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab