CircNet

General Information

circRNA Basic Information

CircID	chr6:139373084\|139373221
Strand	-
CircType	exon
Host Gene	ENSG00000164442.9;
Algorism	CIRI2;
Sequence	GCCGAAGAAGTTGGGGGTTTGATTTCTTTCGCCGGGGTTTCGATCGAGTCAACAGCTCACTCTGCTGGGCTGCTGTTTGCACACGAAGTCCGTCATAAAATCAAACTCGTTTTGCCCCAGCCAGAGTTCGGGCAGCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:139373084\|139373221	hsa-miR-19a-5p	0	0	1
chr6:139373084\|139373221	hsa-miR-19a-3p	0	0	1
chr6:139373084\|139373221	hsa-miR-22-5p	0	0	1
chr6:139373084\|139373221	hsa-miR-22-3p	0	0	1
chr6:139373084\|139373221	hsa-miR-149-5p	0	0	1
chr6:139373084\|139373221	hsa-miR-149-3p	0	0	1
chr6:139373084\|139373221	hsa-miR-558	0	0	1
chr6:139373084\|139373221	hsa-miR-922	0	0	1
chr6:139373084\|139373221	hsa-miR-1267	0	1	1
chr6:139373084\|139373221	hsa-miR-486-3p	0	0	1
chr6:139373084\|139373221	hsa-miR-19b	0	0	1
chr6:139373084\|139373221	hsa-miR-762	1	0	0
chr6:139373084\|139373221	hsa-miR-4505	0	1	0
chr6:139373084\|139373221	hsa-miR-5685	0	1	0
chr6:139373084\|139373221	hsa-miR-5787	1	1	0
chr6:139373084\|139373221	hsa-miR-4731-5p	0	1	0
chr6:139373084\|139373221	hsa-miR-6716-3p	0	1	0
chr6:139373084\|139373221	hsa-miR-3160-3p	1	0	0
chr6:139373084\|139373221	hsa-miR-4763-3p	1	0	0
chr6:139373084\|139373221	hsa-miR-6787-5p	1	0	0
chr6:139373084\|139373221	hsa-miR-5586-3p	0	1	0
chr6:139373084\|139373221	hsa-miR-4700-5p	1	0	0
chr6:139373084\|139373221	hsa-miR-4690-3p	0	1	0
chr6:139373084\|139373221	hsa-miR-6504-5p	0	1	0
chr6:139373084\|139373221	hsa-miR-6771-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:139373084\|139373221
ORF Type	ORF1
Protein Length	40
Nucleotide Length	120
Protein Sequence	MISFAGVSIESTAHSAGLLFAHEVRHKIKLVLPQPEFGQL
Nucleotide Sequence	TTGATTTCTTTCGCCGGGGTTTCGATCGAGTCAACAGCTCACTCTGCTGGGCTGCTGTTTGCACACGAAGTCCGTCATAAAATCAAACTCGTTTTGCCCCAGCCAGAGTTCGGGCAGCTC

CircID	chr6:139373084\|139373221
ORF Type	ORF2
Protein Length	25
Nucleotide Length	75
Protein Sequence	MLGCCLHTKSVIKSNSFCPSQSSGS
Nucleotide Sequence	CTGCTGGGCTGCTGTTTGCACACGAAGTCCGTCATAAAATCAAACTCGTTTTGCCCCAGCCAGAGTTCGGGCAGC

CircID	chr6:139373084\|139373221
ORF Type	ORF3
Protein Length	28
Nucleotide Length	87
Protein Sequence	MPELWLGQNEFDFMTDFVCKQQPSRVSC
Nucleotide Sequence	CTGCCCGAACTCTGGCTGGGGCAAAACGAGTTTGATTTTATGACGGACTTCGTGTGCAAACAGCAGCCCAGCAGAGTGAGCTGTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information