CircNet

General Information

circRNA Basic Information

CircID	chr6:144403123\|144577288
Strand	+
CircType	exon
Host Gene	ENSG00000152818.18;
Algorism	CIRI2;find_circ;DCC;
Sequence	ATGAACACAATGACGTACAGAAGAAAACCTTTACCAAATGGATAAATGCTCGATTTTCAAAGAGTGGGAAACCACCCATCAATGATATGTTCACAGACCTCAAAGATGGAAGGAAGCTATTGGATCTTCTAGAAGGCCTCACAGGAACATCACTGCCAAAGGAACGTGGTTCCACAAGGGTACATGCCTTAAATAACGTCAACAGAGTGCTGCAGGTTTTACATCAGAACAATGTGGAATTAGTGAATATAGGGGGAACTGACATTGTGGATGGAAATCACAAACTGACTTTGGGGTTACTTTGGAGCATCATTTTGCACTGGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:144403123\|144577288	hsa-miR-223-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:144403123\|144577288
ORF Type	ORF1
Protein Length	80
Nucleotide Length	240
Protein Sequence	MFTDLKDGRKLLDLLEGLTGTSLPKERGSTRVHALNNVNRVLQVLHQNNVELVNIGGTDIVDGNHKLTLGLLWSIILHWQ
Nucleotide Sequence	ATGTTCACAGACCTCAAAGATGGAAGGAAGCTATTGGATCTTCTAGAAGGCCTCACAGGAACATCACTGCCAAAGGAACGTGGTTCCACAAGGGTACATGCCTTAAATAACGTCAACAGAGTGCTGCAGGTTTTACATCAGAACAATGTGGAATTAGTGAATATAGGGGGAACTGACATTGTGGATGGAAATCACAAACTGACTTTGGGGTTACTTTGGAGCATCATTTTGCACTGGCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:144403123\|144577288	U2AF2	2	9	0
chr6:144403123\|144577288	FUS	0	2	0
chr6:144403123\|144577288	PRPF8	0	2	0
chr6:144403123\|144577288	DGCR8	1	1	0
chr6:144403123\|144577288	SRSF1	0	2	2
chr6:144403123\|144577288	NOP58	1	2	3
chr6:144403123\|144577288	NOP56	1	2	0
chr6:144403123\|144577288	DDX54	1	0	5
chr6:144403123\|144577288	RBM10	0	1	0
chr6:144403123\|144577288	DHX9	0	2	0
chr6:144403123\|144577288	HNRNPA1	0	1	0
chr6:144403123\|144577288	LIN28B	1	0	1
chr6:144403123\|144577288	LIN28A	0	0	1
chr6:144403123\|144577288	IGF2BP1	0	0	1
chr6:144403123\|144577288	IGF2BP2	0	1	3
chr6:144403123\|144577288	TARDBP	0	1	0
chr6:144403123\|144577288	BUD13	0	0	2
chr6:144403123\|144577288	CSTF2T	1	0	2
chr6:144403123\|144577288	CSTF2	0	2	0
chr6:144403123\|144577288	AGO2	0	1	1
chr6:144403123\|144577288	EIF4A3	3	2	8
chr6:144403123\|144577288	FBL	0	1	1

CircRNA Information