CircNet

General Information

circRNA Basic Information

CircID	chr6:144700087\|144803147
Strand	+
CircType	exon
Host Gene	ENSG00000152818.18;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGCCCATTTGGAGGCCAGCGCTGAGAAGTGGAACAGGTTGCTGATGTCCTTAGAAGAACTGATCAAATGGCTGAATATGAAAGATGAAGAGCTTAAGAAACAAATGCCTATTGGAGGAGATGTTCCAGCCTTACAGCTCCAGTATGACCATTGTAAGGCCCTGAGACGGGAGTTAAAGGAGAAAGAATATTCTGTCCTGAATGCTGTCGACCAGGCCCGAGTTTTCTTGGCTGATCAGCCAATTGAGGCCCCTGAAGAGCCAAGAAGAAACCTACAATCAAAAACAGAATAACAATAAACCAGAAATAAGTGTGAAAGAGTTTATAGATTGGATGCATTTGGAACCACAGTCCATGGTTTGGCTCCCAGTTTTACATCGAGTGGCAGCAGCGGAGACTGCAAAACATCAGGCCAAATGCAACATCTGTAAAGAATGTCCAATTGTCGGGTTCAGGTATAGAAGCCTTAAGCATTTTAACTATGATGTCTGCCAGAGTTGTTTCTTTTCGGGTCGAACAGCAAAAGGTCACAAATTACATTACCCAATGGTGGAATATTGTATACCT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:144700087\|144803147	hsa-miR-218-1-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:144700087\|144803147
ORF Type	ORF1
Protein Length	122
Nucleotide Length	366
Protein Sequence	MLSTRPEFSWLISQLRPLKSQEETYNQKQNNNKPEISVKEFIDWMHLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIVGFRYRSLKHFNYDVCQSCFFSGRTAKGHKLHYPMVEYCIP
Nucleotide Sequence	ATGCTGTCGACCAGGCCCGAGTTTTCTTGGCTGATCAGCCAATTGAGGCCCCTGAAGAGCCAAGAAGAAACCTACAATCAAAAACAGAATAACAATAAACCAGAAATAAGTGTGAAAGAGTTTATAGATTGGATGCATTTGGAACCACAGTCCATGGTTTGGCTCCCAGTTTTACATCGAGTGGCAGCAGCGGAGACTGCAAAACATCAGGCCAAATGCAACATCTGTAAAGAATGTCCAATTGTCGGGTTCAGGTATAGAAGCCTTAAGCATTTTAACTATGATGTCTGCCAGAGTTGTTTCTTTTCGGGTCGAACAGCAAAAGGTCACAAATTACATTACCCAATGGTGGAATATTGTATACCT

CircID	chr6:144700087\|144803147
ORF Type	ORF2
Protein Length	83
Nucleotide Length	249
Protein Sequence	MSLEELIKWLNMKDEELKKQMPIGGDVPALQLQYDHCKALRRELKEKEYSVLNAVDQARVFLADQPIEAPEEPRRNLQSKTE*
Nucleotide Sequence	ATGTCCTTAGAAGAACTGATCAAATGGCTGAATATGAAAGATGAAGAGCTTAAGAAACAAATGCCTATTGGAGGAGATGTTCCAGCCTTACAGCTCCAGTATGACCATTGTAAGGCCCTGAGACGGGAGTTAAAGGAGAAAGAATATTCTGTCCTGAATGCTGTCGACCAGGCCCGAGTTTTCTTGGCTGATCAGCCAATTGAGGCCCCTGAAGAGCCAAGAAGAAACCTACAATCAAAAACAGAATAA

CircID	chr6:144700087\|144803147
ORF Type	ORF3
Protein Length	77
Nucleotide Length	231
Protein Sequence	MHPIYKLFHTYFWFIVILFLIVGFFLALQGPQLADQPRKLGPGRQHSGQNILSPLTPVSGPYNGHTGAVRLEHLLQ*
Nucleotide Sequence	ATGCATCCAATCTATAAACTCTTTCACACTTATTTCTGGTTTATTGTTATTCTGTTTTTGATTGTAGGTTTCTTCTTGGCTCTTCAGGGGCCTCAATTGGCTGATCAGCCAAGAAAACTCGGGCCTGGTCGACAGCATTCAGGACAGAATATTCTTTCTCCTTTAACTCCCGTCTCAGGGCCTTACAATGGTCATACTGGAGCTGTAAGGCTGGAACATCTCCTCCAATAG

CircID	chr6:144700087\|144803147
ORF Type	ORF4
Protein Length	34
Nucleotide Length	102
Protein Sequence	MLKASIPEPDNWTFFTDVAFGLMFCSLRCCHSM*
Nucleotide Sequence	ATGCTTAAGGCTTCTATACCTGAACCCGACAATTGGACATTCTTTACAGATGTTGCATTTGGCCTGATGTTTTGCAGTCTCCGCTGCTGCCACTCGATGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:144700087\|144803147	NOP56	1	0	0
chr6:144700087\|144803147	ELAVL1	2	4	0
chr6:144700087\|144803147	KHDRBS1	2	0	0
chr6:144700087\|144803147	PRPF8	0	1	0
chr6:144700087\|144803147	UPF1	1	0	0
chr6:144700087\|144803147	TAF15	1	1	0
chr6:144700087\|144803147	FMR1	0	0	3
chr6:144700087\|144803147	TROVE2	1	0	0
chr6:144700087\|144803147	FUS	0	0	1
chr6:144700087\|144803147	NOP58	0	1	2
chr6:144700087\|144803147	U2AF2	1	12	1
chr6:144700087\|144803147	DDX54	0	0	8
chr6:144700087\|144803147	MBNL2	2	0	0
chr6:144700087\|144803147	HNRNPA1	0	1	0
chr6:144700087\|144803147	LIN28A	0	0	1
chr6:144700087\|144803147	FXR1	0	0	1
chr6:144700087\|144803147	IGF2BP3	0	0	1
chr6:144700087\|144803147	IGF2BP2	1	1	8
chr6:144700087\|144803147	BUD13	0	0	1
chr6:144700087\|144803147	CSTF2T	0	0	2
chr6:144700087\|144803147	RBM27	1	0	1
chr6:144700087\|144803147	AGO2	0	1	0
chr6:144700087\|144803147	EWSR1	0	0	1
chr6:144700087\|144803147	EIF4A3	2	0	6
chr6:144700087\|144803147	FBL	0	0	2

CircRNA Information