CircRNA Information

General Information
circRNA Basic Information
CircID chr6:145955177|145955341
Strand +
CircType exon
Host Gene ENSG00000146414.14;
Algorism CIRI2;
Sequence CAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:145955177|145955341 hsa-miR-26b-5p 0 0 1
chr6:145955177|145955341 hsa-miR-26b-3p 0 0 1
chr6:145955177|145955341 hsa-miR-448 0 0 1
chr6:145955177|145955341 hsa-miR-498-5p 0 0 1
chr6:145955177|145955341 hsa-miR-498-3p 0 0 1
chr6:145955177|145955341 hsa-miR-578 0 0 1
chr6:145955177|145955341 hsa-miR-612 1 1 1
chr6:145955177|145955341 hsa-miR-647 0 0 1
chr6:145955177|145955341 hsa-miR-1298-5p 0 0 1
chr6:145955177|145955341 hsa-miR-1298-3p 0 0 1
chr6:145955177|145955341 hsa-miR-765 0 0 1
chr6:145955177|145955341 hsa-miR-1237-5p 0 0 1
chr6:145955177|145955341 hsa-miR-1237-3p 0 0 1
chr6:145955177|145955341 hsa-miR-1238-5p 0 0 1
chr6:145955177|145955341 hsa-miR-1238-3p 0 0 1
chr6:145955177|145955341 hsa-miR-1297 0 0 1
chr6:145955177|145955341 hsa-miR-1305 0 0 1
chr6:145955177|145955341 hsa-miR-1248 0 0 1
chr6:145955177|145955341 hsa-miR-1272 0 1 1
chr6:145955177|145955341 hsa-miR-1322 0 0 1
chr6:145955177|145955341 hsa-miR-127-5p 0 0 1
chr6:145955177|145955341 hsa-miR-490-3p 0 1 1
chr6:145955177|145955341 hsa-miR-767-3p 0 0 1
chr6:145955177|145955341 hsa-miR-1207-5p 0 1 1
chr6:145955177|145955341 hsa-miR-26a 0 0 1
chr6:145955177|145955341 hsa-miR-1285 0 0 1
chr6:145955177|145955341 hsa-miR-646 1 0 0
chr6:145955177|145955341 hsa-miR-4539 0 1 0
chr6:145955177|145955341 hsa-miR-6072 0 1 0
chr6:145955177|145955341 hsa-miR-6132 0 1 0
chr6:145955177|145955341 hsa-miR-6860 1 1 0
chr6:145955177|145955341 hsa-miR-6762-3p 1 0 0
chr6:145955177|145955341 hsa-miR-6721-5p 0 1 0
chr6:145955177|145955341 hsa-miR-6868-3p 1 1 0
chr6:145955177|145955341 hsa-miR-6882-3p 1 1 0
chr6:145955177|145955341 hsa-miR-939-3p 0 1 0
chr6:145955177|145955341 hsa-miR-6818-3p 0 1 0
chr6:145955177|145955341 hsa-miR-670-3p 0 1 0
chr6:145955177|145955341 hsa-miR-653-3p 0 1 0
chr6:145955177|145955341 hsa-miR-6515-3p 1 0 0
chr6:145955177|145955341 hsa-miR-4423-5p 0 1 0
chr6:145955177|145955341 hsa-miR-744-3p 1 0 0
chr6:145955177|145955341 hsa-miR-5189-5p 0 1 0
chr6:145955177|145955341 hsa-miR-3187-5p 0 1 0
chr6:145955177|145955341 hsa-miR-1199-5p 0 1 0
chr6:145955177|145955341 hsa-miR-6893-3p 1 0 0
chr6:145955177|145955341 hsa-miR-3059-5p 1 0 0
chr6:145955177|145955341 hsa-miR-6891-3p 1 1 0
chr6:145955177|145955341 hsa-miR-6876-3p 1 1 0
chr6:145955177|145955341 hsa-miR-6781-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:145955177|145955341
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MKMSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSD
Nucleotide Sequence TTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGAT

CircID chr6:145955177|145955341
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MLVIITYDDRFIPSVLMHIPMKLLPLFLIYPHWRSTFPSAAHFQVFLA
Nucleotide Sequence CTGCTCGTCATCATCACTTATGATGATAGGTTCATTCCTTCTGTCCTCATGCATATTCCAATGAAGCTGCTGCCTCTTTTCCTCATCTACCCTCACTGGAGGAGCACGTTTCCGTCGGCTGCTCATTTTCAAGTTTTCTTGGCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites