CircRNA Information

General Information
circRNA Basic Information
CircID chr6:150214744|150216856
Strand +
CircType exon
Host Gene ENSG00000198729.4;
Algorism CIRI2;
Sequence CTCTGTTGGTTTGTAGCAGTCTACAAGAGCTTCCTGTAATTTTGAAGCTCTCTCTTCATCACTGTCTGCATCAAGAAGATCATCAATGTCAATTTCTACCTCTGGCATTTCTTCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:150214744|150216856 hsa-let-7b-5p 0 0 1
chr6:150214744|150216856 hsa-let-7b-3p 0 0 1
chr6:150214744|150216856 hsa-let-7c-5p 0 0 1
chr6:150214744|150216856 hsa-let-7c-3p 0 0 1
chr6:150214744|150216856 hsa-let-7d-5p 0 0 1
chr6:150214744|150216856 hsa-let-7d-3p 0 0 1
chr6:150214744|150216856 hsa-let-7e-5p 0 0 1
chr6:150214744|150216856 hsa-let-7e-3p 0 0 1
chr6:150214744|150216856 hsa-miR-98-5p 0 0 1
chr6:150214744|150216856 hsa-miR-98-3p 0 0 1
chr6:150214744|150216856 hsa-miR-221-5p 0 0 1
chr6:150214744|150216856 hsa-miR-221-3p 0 0 1
chr6:150214744|150216856 hsa-miR-222-5p 0 0 1
chr6:150214744|150216856 hsa-miR-222-3p 0 0 1
chr6:150214744|150216856 hsa-let-7g-5p 0 0 1
chr6:150214744|150216856 hsa-let-7g-3p 0 0 1
chr6:150214744|150216856 hsa-let-7i-5p 0 0 1
chr6:150214744|150216856 hsa-let-7i-3p 0 0 1
chr6:150214744|150216856 hsa-miR-489-5p 0 0 1
chr6:150214744|150216856 hsa-miR-489-3p 0 0 1
chr6:150214744|150216856 hsa-miR-526b-5p 0 0 1
chr6:150214744|150216856 hsa-miR-526b-3p 0 0 1
chr6:150214744|150216856 hsa-miR-643 0 0 1
chr6:150214744|150216856 hsa-miR-1324 0 0 1
chr6:150214744|150216856 hsa-miR-1283 0 0 1
chr6:150214744|150216856 hsa-let-7a 0 0 1
chr6:150214744|150216856 hsa-let-7f 0 0 1
chr6:150214744|150216856 hsa-miR-151-3p 0 0 1
chr6:150214744|150216856 hsa-miR-3138 0 1 0
chr6:150214744|150216856 hsa-miR-4257 1 1 0
chr6:150214744|150216856 hsa-miR-4458 0 1 0
chr6:150214744|150216856 hsa-let-7f-5p 0 1 0
chr6:150214744|150216856 hsa-let-7a-5p 0 1 0
chr6:150214744|150216856 hsa-miR-4763-3p 1 0 0
chr6:150214744|150216856 hsa-miR-6831-5p 0 1 0
chr6:150214744|150216856 hsa-miR-6806-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:150214744|150216856
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence LLVCSSLQELPVILKLSLHHCLHQEDHQCQFLPLAFLL
Nucleotide Sequence CTGTTGGTTTGTAGCAGTCTACAAGAGCTTCCTGTAATTTTGAAGCTCTCTCTTCATCACTGTCTGCATCAAGAAGATCATCAATGTCAATTTCTACCTCTGGCATTTCTTCTT

CircID chr6:150214744|150216856
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MPEVEIDIDDLLDADSDEERASKLQEALVDCYKPTE
Nucleotide Sequence ATGCCAGAGGTAGAAATTGACATTGATGATCTTCTTGATGCAGACAGTGATGAAGAGAGAGCTTCAAAATTACAGGAAGCTCTTGTAGACTGCTACAAACCAACAGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites