CircRNA Information

General Information
circRNA Basic Information
CircID chr6:150842690|150842835
Strand -
CircType exon
Host Gene ENSG00000120278.13;
Algorism CIRI2;
Sequence AAGAAAGTTTTTTTGTTTGGTTGGTTTTTTTGTTTGTTTGTTTTTTTCTTGAGACTGAGTCTCTCCCTGTTGCCCAAGTTGGAGTGCAATCTTGGCTCACTGCAGCCTCCACCTCCCCGGTTCCAGCGATTCTCCTGCCTCAGCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:150842690|150842835 hsa-miR-25-5p 0 0 1
chr6:150842690|150842835 hsa-miR-25-3p 0 0 1
chr6:150842690|150842835 hsa-miR-32-5p 0 0 1
chr6:150842690|150842835 hsa-miR-32-3p 0 0 1
chr6:150842690|150842835 hsa-miR-185-5p 0 0 1
chr6:150842690|150842835 hsa-miR-185-3p 0 0 1
chr6:150842690|150842835 hsa-miR-363-5p 0 0 1
chr6:150842690|150842835 hsa-miR-363-3p 0 0 1
chr6:150842690|150842835 hsa-miR-367-5p 0 0 1
chr6:150842690|150842835 hsa-miR-367-3p 0 0 1
chr6:150842690|150842835 hsa-miR-495-5p 0 0 1
chr6:150842690|150842835 hsa-miR-495-3p 0 0 1
chr6:150842690|150842835 hsa-miR-92b-5p 0 0 1
chr6:150842690|150842835 hsa-miR-92b-3p 0 0 1
chr6:150842690|150842835 hsa-miR-622 0 0 1
chr6:150842690|150842835 hsa-miR-635 0 0 1
chr6:150842690|150842835 hsa-miR-650 0 0 1
chr6:150842690|150842835 hsa-miR-940 0 0 1
chr6:150842690|150842835 hsa-miR-513c-5p 0 0 1
chr6:150842690|150842835 hsa-miR-513c-3p 0 0 1
chr6:150842690|150842835 hsa-miR-1827 0 1 1
chr6:150842690|150842835 hsa-miR-485-5p 0 1 1
chr6:150842690|150842835 hsa-miR-548d-3p 0 0 1
chr6:150842690|150842835 hsa-miR-92a 0 0 1
chr6:150842690|150842835 hsa-miR-608 1 0 0
chr6:150842690|150842835 hsa-miR-761 0 1 0
chr6:150842690|150842835 hsa-miR-3147 0 1 0
chr6:150842690|150842835 hsa-miR-3196 1 0 0
chr6:150842690|150842835 hsa-miR-4298 1 0 0
chr6:150842690|150842835 hsa-miR-4430 1 0 0
chr6:150842690|150842835 hsa-miR-4441 0 1 0
chr6:150842690|150842835 hsa-miR-3135b 1 0 0
chr6:150842690|150842835 hsa-miR-4656 0 1 0
chr6:150842690|150842835 hsa-miR-4688 1 0 0
chr6:150842690|150842835 hsa-miR-4706 1 1 0
chr6:150842690|150842835 hsa-miR-4739 1 1 0
chr6:150842690|150842835 hsa-miR-5787 1 0 0
chr6:150842690|150842835 hsa-miR-6134 0 1 0
chr6:150842690|150842835 hsa-miR-6860 1 0 0
chr6:150842690|150842835 hsa-miR-8089 1 0 0
chr6:150842690|150842835 hsa-miR-12114 1 1 0
chr6:150842690|150842835 hsa-miR-12126 0 1 0
chr6:150842690|150842835 hsa-miR-17-3p 0 1 0
chr6:150842690|150842835 hsa-miR-4433a-3p 1 0 0
chr6:150842690|150842835 hsa-miR-6765-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6861-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6825-5p 1 1 0
chr6:150842690|150842835 hsa-miR-6894-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6799-5p 1 0 0
chr6:150842690|150842835 hsa-miR-8071 1 0 0
chr6:150842690|150842835 hsa-miR-7851-3p 1 0 0
chr6:150842690|150842835 hsa-miR-6089 1 0 0
chr6:150842690|150842835 hsa-miR-3192-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6880-5p 1 1 0
chr6:150842690|150842835 hsa-miR-6746-5p 1 0 0
chr6:150842690|150842835 hsa-miR-4722-5p 1 1 0
chr6:150842690|150842835 hsa-miR-7160-5p 1 0 0
chr6:150842690|150842835 hsa-miR-24-3p 0 1 0
chr6:150842690|150842835 hsa-miR-4655-5p 1 1 0
chr6:150842690|150842835 hsa-miR-6772-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6732-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6760-5p 1 0 0
chr6:150842690|150842835 hsa-miR-2467-3p 1 0 0
chr6:150842690|150842835 hsa-miR-6782-5p 1 0 0
chr6:150842690|150842835 hsa-miR-4640-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6771-5p 1 0 0
chr6:150842690|150842835 hsa-miR-4787-5p 1 0 0
chr6:150842690|150842835 hsa-miR-149-3p 1 0 0
chr6:150842690|150842835 hsa-miR-6824-5p 1 0 0
chr6:150842690|150842835 hsa-miR-3664-3p 0 1 0
chr6:150842690|150842835 hsa-miR-1207-5p 1 0 0
chr6:150842690|150842835 hsa-miR-1273h-5p 1 1 0
chr6:150842690|150842835 hsa-miR-4763-3p 1 0 0
chr6:150842690|150842835 hsa-miR-6787-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6893-5p 0 1 0
chr6:150842690|150842835 hsa-miR-6726-5p 1 1 0
chr6:150842690|150842835 hsa-miR-6752-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6754-5p 0 1 0
chr6:150842690|150842835 hsa-miR-6756-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6803-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6819-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6842-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6851-5p 1 1 0
chr6:150842690|150842835 hsa-miR-6722-3p 1 0 0
chr6:150842690|150842835 hsa-miR-6763-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6774-5p 1 1 0
chr6:150842690|150842835 hsa-miR-6779-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6780a-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6808-5p 1 1 0
chr6:150842690|150842835 hsa-miR-7111-5p 1 0 0
chr6:150842690|150842835 hsa-miR-4728-5p 1 0 0
chr6:150842690|150842835 hsa-miR-4632-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6777-5p 1 1 0
chr6:150842690|150842835 hsa-miR-6848-5p 1 1 0
chr6:150842690|150842835 hsa-miR-6889-5p 1 1 0
chr6:150842690|150842835 hsa-miR-3187-5p 1 0 0
chr6:150842690|150842835 hsa-miR-939-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6511a-5p 1 0 0
chr6:150842690|150842835 hsa-miR-1285-3p 0 1 0
chr6:150842690|150842835 hsa-miR-4700-5p 1 0 0
chr6:150842690|150842835 hsa-miR-6724-5p 1 0 0
chr6:150842690|150842835 hsa-miR-4756-5p 1 1 0
chr6:150842690|150842835 hsa-miR-6884-5p 0 1 0
chr6:150842690|150842835 hsa-miR-362-5p 1 0 0
chr6:150842690|150842835 hsa-miR-514b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:150842690|150842835
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MFGWFFCLFVFFLRLSLSLLPKLECNLGSLQPPPPRFQRFSCLS
Nucleotide Sequence TTGTTTGGTTGGTTTTTTTGTTTGTTTGTTTTTTTCTTGAGACTGAGTCTCTCCCTGTTGCCCAAGTTGGAGTGCAATCTTGGCTCACTGCAGCCTCCACCTCCCCGGTTCCAGCGATTCTCCTGCCTCAGC
CircID chr6:150842690|150842835
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MVFLFVCFFLETESLPVAQVGVQSWLTAASTSPVPAILLPQP
Nucleotide Sequence TTGGTTTTTTTGTTTGTTTGTTTTTTTCTTGAGACTGAGTCTCTCCCTGTTGCCCAAGTTGGAGTGCAATCTTGGCTCACTGCAGCCTCCACCTCCCCGGTTCCAGCGATTCTCCTGCCTCAGCCT
CircID chr6:150842690|150842835
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MRQENRWNRGGGGCSEPRLHSNLGNRERLSLKKKTNKQKNQPNKKTF
Nucleotide Sequence CTGAGGCAGGAGAATCGCTGGAACCGGGGAGGTGGAGGCTGCAGTGAGCCAAGATTGCACTCCAACTTGGGCAACAGGGAGAGACTCAGTCTCAAGAAAAAAACAAACAAACAAAAAAACCAACCAAACAAAAAAACTTTC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab