CircRNA Information

General Information
circRNA Basic Information
CircID chr6:154156465|154156586
Strand +
CircType exon
Host Gene ENSG00000074706.12;
Algorism CIRI2;
Sequence AGCACTTTGTAGTTTGCAAATTGGTGTGTTTTCAGCCCCCTCCCGCTGCCCCATGCTCTGAGATGATTGTGGATTATTACAGTGAAGTGCCTGGCCCGGAGCCCCCAGTGATGAAGCAGGAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:154156465|154156586 hsa-miR-17-5p 0 0 1
chr6:154156465|154156586 hsa-miR-17-3p 0 0 1
chr6:154156465|154156586 hsa-miR-20a-5p 0 0 1
chr6:154156465|154156586 hsa-miR-20a-3p 0 0 1
chr6:154156465|154156586 hsa-miR-93-5p 0 0 1
chr6:154156465|154156586 hsa-miR-93-3p 0 0 1
chr6:154156465|154156586 hsa-miR-106a-5p 0 0 1
chr6:154156465|154156586 hsa-miR-106a-3p 0 0 1
chr6:154156465|154156586 hsa-miR-106b-5p 0 0 1
chr6:154156465|154156586 hsa-miR-106b-3p 0 0 1
chr6:154156465|154156586 hsa-miR-302a-5p 0 0 1
chr6:154156465|154156586 hsa-miR-302a-3p 0 0 1
chr6:154156465|154156586 hsa-miR-302b-5p 0 0 1
chr6:154156465|154156586 hsa-miR-302b-3p 0 0 1
chr6:154156465|154156586 hsa-miR-302c-5p 0 0 1
chr6:154156465|154156586 hsa-miR-302c-3p 0 0 1
chr6:154156465|154156586 hsa-miR-302d-5p 0 0 1
chr6:154156465|154156586 hsa-miR-302d-3p 0 0 1
chr6:154156465|154156586 hsa-miR-370-5p 0 0 1
chr6:154156465|154156586 hsa-miR-370-3p 0 0 1
chr6:154156465|154156586 hsa-miR-372-5p 0 0 1
chr6:154156465|154156586 hsa-miR-372-3p 0 0 1
chr6:154156465|154156586 hsa-miR-373-5p 0 0 1
chr6:154156465|154156586 hsa-miR-373-3p 0 0 1
chr6:154156465|154156586 hsa-miR-20b-5p 0 0 1
chr6:154156465|154156586 hsa-miR-20b-3p 0 0 1
chr6:154156465|154156586 hsa-miR-520e-5p 0 0 1
chr6:154156465|154156586 hsa-miR-520e-3p 0 0 1
chr6:154156465|154156586 hsa-miR-520b-5p 0 0 1
chr6:154156465|154156586 hsa-miR-520b-3p 0 0 1
chr6:154156465|154156586 hsa-miR-519d-5p 0 0 1
chr6:154156465|154156586 hsa-miR-519d-3p 0 0 1
chr6:154156465|154156586 hsa-miR-520g-5p 0 0 1
chr6:154156465|154156586 hsa-miR-520g-3p 0 0 1
chr6:154156465|154156586 hsa-miR-520h 0 0 1
chr6:154156465|154156586 hsa-miR-527 0 0 1
chr6:154156465|154156586 hsa-miR-570-5p 0 0 1
chr6:154156465|154156586 hsa-miR-570-3p 0 0 1
chr6:154156465|154156586 hsa-miR-637 1 0 1
chr6:154156465|154156586 hsa-miR-1208 0 0 1
chr6:154156465|154156586 hsa-miR-302e 0 0 1
chr6:154156465|154156586 hsa-miR-486-3p 0 0 1
chr6:154156465|154156586 hsa-miR-1283 0 0 1
chr6:154156465|154156586 hsa-miR-885-3p 1 0 1
chr6:154156465|154156586 hsa-miR-524-5p 0 0 1
chr6:154156465|154156586 hsa-miR-520d-3p 0 0 1
chr6:154156465|154156586 hsa-miR-518a-5p 0 0 1
chr6:154156465|154156586 hsa-miR-520a-3p 0 0 1
chr6:154156465|154156586 hsa-miR-520c-3p 0 0 1
chr6:154156465|154156586 hsa-miR-362-3p 0 0 1
chr6:154156465|154156586 hsa-miR-450b-5p 0 0 1
chr6:154156465|154156586 hsa-miR-520d-5p 0 0 1
chr6:154156465|154156586 hsa-miR-329 0 0 1
chr6:154156465|154156586 hsa-miR-760 1 0 0
chr6:154156465|154156586 hsa-miR-1183 1 0 0
chr6:154156465|154156586 hsa-miR-1538 1 0 0
chr6:154156465|154156586 hsa-miR-2861 1 0 0
chr6:154156465|154156586 hsa-miR-3147 1 0 0
chr6:154156465|154156586 hsa-miR-3195 1 0 0
chr6:154156465|154156586 hsa-miR-3196 1 0 0
chr6:154156465|154156586 hsa-miR-4298 1 0 0
chr6:154156465|154156586 hsa-miR-3907 1 0 0
chr6:154156465|154156586 hsa-miR-4437 1 0 0
chr6:154156465|154156586 hsa-miR-4467 1 0 0
chr6:154156465|154156586 hsa-miR-4488 1 0 0
chr6:154156465|154156586 hsa-miR-4492 1 0 0
chr6:154156465|154156586 hsa-miR-4508 1 0 0
chr6:154156465|154156586 hsa-miR-3960 1 0 0
chr6:154156465|154156586 hsa-miR-4688 1 0 0
chr6:154156465|154156586 hsa-miR-4721 1 0 0
chr6:154156465|154156586 hsa-miR-4734 1 0 0
chr6:154156465|154156586 hsa-miR-5090 1 0 0
chr6:154156465|154156586 hsa-miR-5787 1 0 0
chr6:154156465|154156586 hsa-miR-6075 1 0 0
chr6:154156465|154156586 hsa-miR-6085 1 0 0
chr6:154156465|154156586 hsa-miR-8072 1 0 0
chr6:154156465|154156586 hsa-miR-8089 1 0 0
chr6:154156465|154156586 hsa-miR-7155-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6765-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6857-5p 1 0 0
chr6:154156465|154156586 hsa-miR-1972 1 0 0
chr6:154156465|154156586 hsa-miR-1227-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6727-5p 1 0 0
chr6:154156465|154156586 hsa-miR-3151-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6793-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6805-5p 1 0 0
chr6:154156465|154156586 hsa-miR-23a-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6786-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6835-5p 1 0 0
chr6:154156465|154156586 hsa-miR-1226-5p 1 0 0
chr6:154156465|154156586 hsa-miR-4640-5p 1 0 0
chr6:154156465|154156586 hsa-miR-1228-5p 1 0 0
chr6:154156465|154156586 hsa-miR-149-3p 1 0 0
chr6:154156465|154156586 hsa-miR-6781-5p 1 0 0
chr6:154156465|154156586 hsa-miR-7112-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6895-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6508-3p 1 0 0
chr6:154156465|154156586 hsa-miR-10400-5p 1 0 0
chr6:154156465|154156586 hsa-miR-1233-5p 1 0 0
chr6:154156465|154156586 hsa-miR-4763-3p 1 0 0
chr6:154156465|154156586 hsa-miR-6787-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6816-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6743-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6756-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6803-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6751-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6779-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6797-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6879-5p 1 0 0
chr6:154156465|154156586 hsa-miR-7111-5p 1 0 0
chr6:154156465|154156586 hsa-miR-1915-3p 1 0 0
chr6:154156465|154156586 hsa-miR-4728-5p 1 0 0
chr6:154156465|154156586 hsa-miR-10396b-5p 1 0 0
chr6:154156465|154156586 hsa-miR-1237-5p 1 0 0
chr6:154156465|154156586 hsa-miR-328-5p 1 0 0
chr6:154156465|154156586 hsa-miR-4632-5p 1 0 0
chr6:154156465|154156586 hsa-miR-4649-5p 1 0 0
chr6:154156465|154156586 hsa-miR-4745-3p 1 0 0
chr6:154156465|154156586 hsa-miR-4745-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6846-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6848-5p 1 0 0
chr6:154156465|154156586 hsa-miR-4697-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6885-5p 1 0 0
chr6:154156465|154156586 hsa-miR-30c-1-3p 1 0 0
chr6:154156465|154156586 hsa-miR-4665-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6724-5p 1 0 0
chr6:154156465|154156586 hsa-miR-6791-5p 1 0 0
chr6:154156465|154156586 hsa-miR-10400-3p 1 0 0
chr6:154156465|154156586 hsa-miR-330-5p 1 0 0
chr6:154156465|154156586 hsa-miR-4676-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:154156465|154156586
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MVCFQPPPAAPCSEMIVDYYSEVPGPEPPVMKQE
Nucleotide Sequence TTGGTGTGTTTTCAGCCCCCTCCCGCTGCCCCATGCTCTGAGATGATTGTGGATTATTACAGTGAAGTGCCTGGCCCGGAGCCCCCAGTGATGAAGCAGGAA
CircID chr6:154156465|154156586
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MLHHWGLRARHFTVIIHNHLRAWGSGRGLKTHQFANYKV
Nucleotide Sequence CTGCTTCATCACTGGGGGCTCCGGGCCAGGCACTTCACTGTAATAATCCACAATCATCTCAGAGCATGGGGCAGCGGGAGGGGGCTGAAAACACACCAATTTGCAAACTACAAAGTG
CircID chr6:154156465|154156586
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MGAPGQALHCNNPQSSQSMGQREGAENTPICKLQSA
Nucleotide Sequence CTGGGGGCTCCGGGCCAGGCACTTCACTGTAATAATCCACAATCATCTCAGAGCATGGGGCAGCGGGAGGGGGCTGAAAACACACCAATTTGCAAACTACAAAGTGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab