CircRNA Information

General Information
circRNA Basic Information
CircID chr6:159681614|159681849
Strand -
CircType exon
Host Gene ENSG00000112096.15;
Algorism CIRI2;
Sequence CTTTCAGGCCAAACCAATATATAAGCTTCATGTAGTGATTTACAATTTTGGTATACAGCCATACCACCCTGAAGGCACCCGATCTCGACTGATTTACAATTTTGCCTTTAACTTCTGCTTTCCTGAAATTTACCACTGCCTTTAAATACTCTAGCTTGTAGGTCATCATGGAGATTGGGTCTCAAGCATGAGCTGCCCAATTCTCCTTGCTTGGCGCCCTGCAAATAAACATCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:159681614|159681849 hsa-miR-21-5p 0 0 1
chr6:159681614|159681849 hsa-miR-21-3p 0 0 1
chr6:159681614|159681849 hsa-miR-192-5p 0 0 1
chr6:159681614|159681849 hsa-miR-192-3p 0 0 1
chr6:159681614|159681849 hsa-miR-34a-5p 0 0 1
chr6:159681614|159681849 hsa-miR-34a-3p 0 0 1
chr6:159681614|159681849 hsa-miR-215-5p 0 0 1
chr6:159681614|159681849 hsa-miR-215-3p 0 0 1
chr6:159681614|159681849 hsa-miR-136-5p 0 0 1
chr6:159681614|159681849 hsa-miR-136-3p 0 0 1
chr6:159681614|159681849 hsa-miR-34b-5p 0 0 1
chr6:159681614|159681849 hsa-miR-34b-3p 0 0 1
chr6:159681614|159681849 hsa-miR-135b-5p 0 0 1
chr6:159681614|159681849 hsa-miR-135b-3p 0 0 1
chr6:159681614|159681849 hsa-miR-449a 0 0 1
chr6:159681614|159681849 hsa-miR-496 0 0 1
chr6:159681614|159681849 hsa-miR-449b-5p 0 0 1
chr6:159681614|159681849 hsa-miR-449b-3p 0 0 1
chr6:159681614|159681849 hsa-miR-298 1 0 1
chr6:159681614|159681849 hsa-miR-873-5p 0 0 1
chr6:159681614|159681849 hsa-miR-873-3p 0 0 1
chr6:159681614|159681849 hsa-miR-1293 0 1 1
chr6:159681614|159681849 hsa-miR-1265 0 0 1
chr6:159681614|159681849 hsa-miR-1272 0 0 1
chr6:159681614|159681849 hsa-miR-127-5p 0 0 1
chr6:159681614|159681849 hsa-miR-769-5p 0 0 1
chr6:159681614|159681849 hsa-miR-34c-3p 0 0 1
chr6:159681614|159681849 hsa-miR-34c-5p 0 0 1
chr6:159681614|159681849 hsa-miR-513a-3p 0 0 1
chr6:159681614|159681849 hsa-miR-590-5p 0 0 1
chr6:159681614|159681849 hsa-miR-135a 0 0 1
chr6:159681614|159681849 hsa-miR-608 1 0 0
chr6:159681614|159681849 hsa-miR-638 1 0 0
chr6:159681614|159681849 hsa-miR-663a 1 0 0
chr6:159681614|159681849 hsa-miR-4436a 1 0 0
chr6:159681614|159681849 hsa-miR-4450 1 0 0
chr6:159681614|159681849 hsa-miR-3135b 1 0 0
chr6:159681614|159681849 hsa-miR-4467 1 0 0
chr6:159681614|159681849 hsa-miR-4483 0 1 0
chr6:159681614|159681849 hsa-miR-4692 1 1 0
chr6:159681614|159681849 hsa-miR-6125 1 0 0
chr6:159681614|159681849 hsa-miR-6127 1 0 0
chr6:159681614|159681849 hsa-miR-6165 1 0 0
chr6:159681614|159681849 hsa-miR-205-3p 1 1 0
chr6:159681614|159681849 hsa-miR-6854-5p 0 1 0
chr6:159681614|159681849 hsa-miR-6089 1 0 0
chr6:159681614|159681849 hsa-miR-4722-5p 1 0 0
chr6:159681614|159681849 hsa-miR-7160-5p 1 0 0
chr6:159681614|159681849 hsa-miR-4474-3p 1 0 0
chr6:159681614|159681849 hsa-miR-6721-5p 1 0 0
chr6:159681614|159681849 hsa-miR-197-5p 1 0 0
chr6:159681614|159681849 hsa-miR-6732-5p 1 0 0
chr6:159681614|159681849 hsa-miR-2467-3p 1 0 0
chr6:159681614|159681849 hsa-miR-885-3p 1 0 0
chr6:159681614|159681849 hsa-miR-124-3p 1 0 0
chr6:159681614|159681849 hsa-miR-4763-3p 1 0 0
chr6:159681614|159681849 hsa-miR-6787-5p 1 0 0
chr6:159681614|159681849 hsa-miR-6756-5p 1 0 0
chr6:159681614|159681849 hsa-miR-6803-5p 1 0 0
chr6:159681614|159681849 hsa-miR-6722-3p 1 0 0
chr6:159681614|159681849 hsa-miR-6879-5p 1 0 0
chr6:159681614|159681849 hsa-miR-6836-5p 0 1 0
chr6:159681614|159681849 hsa-miR-1909-3p 1 0 0
chr6:159681614|159681849 hsa-miR-449c-5p 1 0 0
chr6:159681614|159681849 hsa-miR-4632-5p 1 0 0
chr6:159681614|159681849 hsa-miR-6735-5p 1 0 0
chr6:159681614|159681849 hsa-miR-6831-5p 1 0 0
chr6:159681614|159681849 hsa-miR-6511a-5p 1 0 0
chr6:159681614|159681849 hsa-miR-4646-5p 1 0 0
chr6:159681614|159681849 hsa-miR-2682-5p 1 1 0
chr6:159681614|159681849 hsa-miR-3913-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:159681614|159681849
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MPLNTLACRSSWRLGLKHELPNSPCLAPCK
Nucleotide Sequence CTGCCTTTAAATACTCTAGCTTGTAGGTCATCATGGAGATTGGGTCTCAAGCATGAGCTGCCCAATTCTCCTTGCTTGGCGCCCTGCAAATAA
CircID chr6:159681614|159681849
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MQGAKQGELGSSCLRPNLHDDLQARVFKGSGKFQESRS
Nucleotide Sequence TTGCAGGGCGCCAAGCAAGGAGAATTGGGCAGCTCATGCTTGAGACCCAATCTCCATGATGACCTACAAGCTAGAGTATTTAAAGGCAGTGGTAAATTTCAGGAAAGCAGAAGTTAA
CircID chr6:159681614|159681849
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MMTYKLEYLKAVVNFRKAEVKGKIVNQSRSGAFRVVWLYTKIVNHYMKLIYWFGLK
Nucleotide Sequence ATGATGACCTACAAGCTAGAGTATTTAAAGGCAGTGGTAAATTTCAGGAAAGCAGAAGTTAAAGGCAAAATTGTAAATCAGTCGAGATCGGGTGCCTTCAGGGTGGTATGGCTGTATACCAAAATTGTAAATCACTACATGAAGCTTATATATTGGTTTGGCCTGAAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab