CircRNA Information

General Information
circRNA Basic Information
CircID chr6:16436891|16437046
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGCTTCTCCCACTGCCTTCCCATCTCCTTCCAGTTACTCAGGCCACAGTTGTTGACGTTGTCCTTGATGCCTCTTTTTCTCCTACACAATTCTGCTGGTCCACGGTGCCACCATCTCTTGGCTGGAGTTCATCAGTAACCTCCTGAGTAGTCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:16436891|16437046 hsa-miR-34a-5p 0 0 1
chr6:16436891|16437046 hsa-miR-34a-3p 0 0 1
chr6:16436891|16437046 hsa-miR-449a 0 0 1
chr6:16436891|16437046 hsa-miR-505-5p 0 0 1
chr6:16436891|16437046 hsa-miR-505-3p 0 0 1
chr6:16436891|16437046 hsa-miR-510-5p 0 0 1
chr6:16436891|16437046 hsa-miR-510-3p 0 0 1
chr6:16436891|16437046 hsa-miR-583 0 0 1
chr6:16436891|16437046 hsa-miR-634 0 0 1
chr6:16436891|16437046 hsa-miR-449b-5p 0 0 1
chr6:16436891|16437046 hsa-miR-449b-3p 0 0 1
chr6:16436891|16437046 hsa-miR-766-5p 0 0 1
chr6:16436891|16437046 hsa-miR-766-3p 0 0 1
chr6:16436891|16437046 hsa-miR-922 1 0 1
chr6:16436891|16437046 hsa-miR-663b 0 0 1
chr6:16436891|16437046 hsa-miR-512-5p 0 0 1
chr6:16436891|16437046 hsa-miR-508-5p 0 0 1
chr6:16436891|16437046 hsa-miR-34c-5p 0 0 1
chr6:16436891|16437046 hsa-miR-582-3p 0 0 1
chr6:16436891|16437046 hsa-miR-219-2-3p 0 0 1
chr6:16436891|16437046 hsa-miR-184 1 0 0
chr6:16436891|16437046 hsa-miR-564 1 0 0
chr6:16436891|16437046 hsa-miR-661 1 0 0
chr6:16436891|16437046 hsa-miR-762 1 0 0
chr6:16436891|16437046 hsa-miR-765 1 0 0
chr6:16436891|16437046 hsa-miR-920 1 0 0
chr6:16436891|16437046 hsa-miR-936 1 0 0
chr6:16436891|16437046 hsa-miR-1183 1 0 0
chr6:16436891|16437046 hsa-miR-3137 1 0 0
chr6:16436891|16437046 hsa-miR-3138 1 0 0
chr6:16436891|16437046 hsa-miR-3153 1 0 0
chr6:16436891|16437046 hsa-miR-3154 1 0 0
chr6:16436891|16437046 hsa-miR-3196 1 0 0
chr6:16436891|16437046 hsa-miR-4298 1 0 0
chr6:16436891|16437046 hsa-miR-4306 1 0 0
chr6:16436891|16437046 hsa-miR-3612 1 0 0
chr6:16436891|16437046 hsa-miR-4428 1 1 0
chr6:16436891|16437046 hsa-miR-4441 1 0 0
chr6:16436891|16437046 hsa-miR-4476 1 0 0
chr6:16436891|16437046 hsa-miR-2392 1 0 0
chr6:16436891|16437046 hsa-miR-4510 1 0 0
chr6:16436891|16437046 hsa-miR-4516 1 0 0
chr6:16436891|16437046 hsa-miR-4518 1 0 0
chr6:16436891|16437046 hsa-miR-4533 1 1 0
chr6:16436891|16437046 hsa-miR-4656 1 0 0
chr6:16436891|16437046 hsa-miR-4688 1 0 0
chr6:16436891|16437046 hsa-miR-4689 1 0 0
chr6:16436891|16437046 hsa-miR-4692 0 1 0
chr6:16436891|16437046 hsa-miR-4739 1 0 0
chr6:16436891|16437046 hsa-miR-4779 1 0 0
chr6:16436891|16437046 hsa-miR-4784 1 0 0
chr6:16436891|16437046 hsa-miR-5093 1 0 0
chr6:16436891|16437046 hsa-miR-6078 1 0 0
chr6:16436891|16437046 hsa-miR-6085 1 0 0
chr6:16436891|16437046 hsa-miR-6086 1 0 0
chr6:16436891|16437046 hsa-miR-6088 1 0 0
chr6:16436891|16437046 hsa-miR-6125 1 0 0
chr6:16436891|16437046 hsa-miR-6127 1 0 0
chr6:16436891|16437046 hsa-miR-6129 1 0 0
chr6:16436891|16437046 hsa-miR-6133 1 0 0
chr6:16436891|16437046 hsa-miR-6165 1 0 0
chr6:16436891|16437046 hsa-miR-8080 0 1 0
chr6:16436891|16437046 hsa-miR-8089 1 0 0
chr6:16436891|16437046 hsa-miR-12128 1 0 0
chr6:16436891|16437046 hsa-miR-196a-3p 1 0 0
chr6:16436891|16437046 hsa-miR-7106-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6825-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6720-5p 1 1 0
chr6:16436891|16437046 hsa-miR-6799-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6728-5p 1 0 0
chr6:16436891|16437046 hsa-miR-1236-5p 1 1 0
chr6:16436891|16437046 hsa-miR-5187-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6515-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6807-5p 1 0 0
chr6:16436891|16437046 hsa-miR-3192-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6757-5p 1 0 0
chr6:16436891|16437046 hsa-miR-7847-3p 1 0 0
chr6:16436891|16437046 hsa-miR-4695-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6746-5p 1 0 0
chr6:16436891|16437046 hsa-miR-3622b-5p 1 0 0
chr6:16436891|16437046 hsa-miR-7108-5p 1 0 0
chr6:16436891|16437046 hsa-miR-3605-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6716-5p 1 0 0
chr6:16436891|16437046 hsa-miR-3190-3p 1 0 0
chr6:16436891|16437046 hsa-miR-6760-5p 1 0 0
chr6:16436891|16437046 hsa-miR-2467-3p 1 0 0
chr6:16436891|16437046 hsa-miR-3150b-3p 1 0 0
chr6:16436891|16437046 hsa-miR-6888-5p 1 1 0
chr6:16436891|16437046 hsa-miR-6740-5p 1 0 0
chr6:16436891|16437046 hsa-miR-3186-5p 1 0 0
chr6:16436891|16437046 hsa-miR-185-5p 1 0 0
chr6:16436891|16437046 hsa-miR-204-3p 1 1 0
chr6:16436891|16437046 hsa-miR-1229-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4640-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6771-5p 1 0 0
chr6:16436891|16437046 hsa-miR-92b-5p 1 0 0
chr6:16436891|16437046 hsa-miR-3202 1 0 0
chr6:16436891|16437046 hsa-miR-149-3p 1 0 0
chr6:16436891|16437046 hsa-miR-6824-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6802-5p 1 0 0
chr6:16436891|16437046 hsa-miR-5584-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4800-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4776-5p 1 0 0
chr6:16436891|16437046 hsa-miR-654-5p 1 0 0
chr6:16436891|16437046 hsa-miR-605-3p 0 1 0
chr6:16436891|16437046 hsa-miR-483-5p 1 0 0
chr6:16436891|16437046 hsa-miR-1233-5p 1 0 0
chr6:16436891|16437046 hsa-miR-1273h-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4763-3p 1 0 0
chr6:16436891|16437046 hsa-miR-6778-5p 1 1 0
chr6:16436891|16437046 hsa-miR-6870-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6775-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6726-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6743-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6754-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6769a-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6813-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6819-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6851-5p 1 0 0
chr6:16436891|16437046 hsa-miR-10401-5p 1 0 0
chr6:16436891|16437046 hsa-miR-11181-3p 1 0 0
chr6:16436891|16437046 hsa-miR-1249-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6763-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6779-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6780a-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6788-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6797-5p 1 0 0
chr6:16436891|16437046 hsa-miR-7111-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4728-5p 1 1 0
chr6:16436891|16437046 hsa-miR-5196-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6780b-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4725-3p 1 0 0
chr6:16436891|16437046 hsa-miR-4726-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6883-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4758-5p 1 0 0
chr6:16436891|16437046 hsa-miR-34b-5p 0 1 0
chr6:16436891|16437046 hsa-miR-6731-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6856-5p 1 0 0
chr6:16436891|16437046 hsa-miR-1914-3p 1 0 0
chr6:16436891|16437046 hsa-miR-3173-3p 1 0 0
chr6:16436891|16437046 hsa-miR-3679-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4646-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4747-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6876-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6891-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6785-5p 1 0 0
chr6:16436891|16437046 hsa-miR-4667-5p 1 0 0
chr6:16436891|16437046 hsa-miR-6724-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:16436891|16437046
ORF Type ORF1
Protein Length 48
Nucleotide Length 147
Protein Sequence LLLPLPSHLLPVTQATVVDVVLDASFSPTQFCWSTVPPSLGWSSSVTS
Nucleotide Sequence CTGCTTCTCCCACTGCCTTCCCATCTCCTTCCAGTTACTCAGGCCACAGTTGTTGACGTTGTCCTTGATGCCTCTTTTTCTCCTACACAATTCTGCTGGTCCACGGTGCCACCATCTCTTGGCTGGAGTTCATCAGTAACCTCCTGA
CircID chr6:16436891|16437046
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MLTLSLMPLFLLHNSAGPRCHHLLAGVHQ
Nucleotide Sequence TTGTTGACGTTGTCCTTGATGCCTCTTTTTCTCCTACACAATTCTGCTGGTCCACGGTGCCACCATCTCTTGGCTGGAGTTCATCAGTAA
CircID chr6:16436891|16437046
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MCRRKRGIKDNVNNCGLSNWKEMGRQWEKQ
Nucleotide Sequence TTGTGTAGGAGAAAAAGAGGCATCAAGGACAACGTCAACAACTGTGGCCTGAGTAACTGGAAGGAGATGGGAAGGCAGTGGGAGAAGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab