CircNet

General Information

circRNA Basic Information

CircID	chr6:16753233\|16754091
Strand	-
CircType	exon
Host Gene	ENSG00000124788.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTTTACCTCACAAAAACTACTACAAGCACCAAGCTCCCTGATGGAAAGGAGCATCGTGCATCAAGTCACCAGGGTGGTCCATTCAAGCTGCAGATTTGTTTGTCATCCTTGTACAGCAATCTCCTCCTCCACTGCCACTACAGGGAAGTGCATCACATGTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:16753233\|16754091	hsa-miR-224-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:16753233\|16754091
ORF Type	ORF1
Protein Length	41
Nucleotide Length	123
Protein Sequence	MERSIVHQVTRVVHSSCRFVCHPCTAISSSTATTGKCITCQ
Nucleotide Sequence	ATGGAAAGGAGCATCGTGCATCAAGTCACCAGGGTGGTCCATTCAAGCTGCAGATTTGTTTGTCATCCTTGTACAGCAATCTCCTCCTCCACTGCCACTACAGGGAAGTGCATCACATGTCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:16753233\|16754091	U2AF2	22	26	1
chr6:16753233\|16754091	ELAVL1	14	23	1
chr6:16753233\|16754091	SF3B4	2	0	0
chr6:16753233\|16754091	PRPF8	0	2	1
chr6:16753233\|16754091	YTHDF1	0	2	0
chr6:16753233\|16754091	TAF15	1	1	0
chr6:16753233\|16754091	CPSF7	9	9	0
chr6:16753233\|16754091	CPSF6	3	7	1
chr6:16753233\|16754091	NUDT21	5	2	0
chr6:16753233\|16754091	CPSF3	0	1	0
chr6:16753233\|16754091	RBM15B	0	3	0
chr6:16753233\|16754091	CPSF1	3	0	0
chr6:16753233\|16754091	FUS	4	3	0
chr6:16753233\|16754091	SRSF7	0	0	2
chr6:16753233\|16754091	SRSF1	4	2	0
chr6:16753233\|16754091	NOP58	4	0	2
chr6:16753233\|16754091	SRSF3	1	0	0
chr6:16753233\|16754091	U2AF1	0	0	2
chr6:16753233\|16754091	EIF3B	0	1	0
chr6:16753233\|16754091	NOP56	3	1	1
chr6:16753233\|16754091	SRSF9	0	1	0
chr6:16753233\|16754091	HNRNPU	1	0	0
chr6:16753233\|16754091	DDX54	0	0	1
chr6:16753233\|16754091	RBM10	1	0	0
chr6:16753233\|16754091	HNRNPL	3	0	0
chr6:16753233\|16754091	HNRNPM	0	1	0
chr6:16753233\|16754091	FIP1L1	1	2	0
chr6:16753233\|16754091	PTBP1	13	10	0
chr6:16753233\|16754091	HNRNPC	43	32	7
chr6:16753233\|16754091	DDX3X	0	4	0
chr6:16753233\|16754091	ZC3H7B	1	1	0
chr6:16753233\|16754091	MSI1	1	0	0
chr6:16753233\|16754091	HNRNPA1	6	16	0
chr6:16753233\|16754091	LIN28B	1	0	0
chr6:16753233\|16754091	SFPQ	0	1	0
chr6:16753233\|16754091	IGF2BP3	0	0	1
chr6:16753233\|16754091	IGF2BP2	0	0	1
chr6:16753233\|16754091	TARDBP	3	4	0
chr6:16753233\|16754091	YTHDC1	0	10	0
chr6:16753233\|16754091	BUD13	0	0	2
chr6:16753233\|16754091	KHSRP	0	1	0
chr6:16753233\|16754091	RBM47	1	0	0
chr6:16753233\|16754091	CSTF2T	4	4	0
chr6:16753233\|16754091	SRRM4	1	2	0
chr6:16753233\|16754091	CSTF2	3	4	0
chr6:16753233\|16754091	WDR33	1	1	0
chr6:16753233\|16754091	AGO2	2	0	0
chr6:16753233\|16754091	EIF4A3	3	6	2
chr6:16753233\|16754091	FBL	2	3	1

CircRNA Information