CircRNA Information

General Information
circRNA Basic Information
CircID chr6:169248646|169248765
Strand +
CircType exon
Host Gene ENSG00000186340.13;
Algorism CIRI2;
Sequence GGCCCAGCTCAAGCAGGACGGCAAGTCCAGGGGCACGCTGTTGGCTCTGGAGGGCCCCGGTCTCTCCCAGAGGCAGTTCGAGATCGTCTCCAACGGCCCCGCGGACACGCTGGATCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:169248646|169248765 hsa-miR-185-5p 0 0 1
chr6:169248646|169248765 hsa-miR-185-3p 0 0 1
chr6:169248646|169248765 hsa-miR-370-5p 0 0 1
chr6:169248646|169248765 hsa-miR-370-3p 0 0 1
chr6:169248646|169248765 hsa-miR-326 0 0 1
chr6:169248646|169248765 hsa-miR-422a 0 0 1
chr6:169248646|169248765 hsa-miR-558 0 0 1
chr6:169248646|169248765 hsa-miR-620 0 0 1
chr6:169248646|169248765 hsa-miR-744-5p 0 0 1
chr6:169248646|169248765 hsa-miR-744-3p 0 0 1
chr6:169248646|169248765 hsa-miR-1270 0 0 1
chr6:169248646|169248765 hsa-miR-525-5p 0 0 1
chr6:169248646|169248765 hsa-miR-331-3p 0 1 1
chr6:169248646|169248765 hsa-miR-520a-5p 0 0 1
chr6:169248646|169248765 hsa-miR-330-5p 0 0 1
chr6:169248646|169248765 hsa-miR-378 0 0 1
chr6:169248646|169248765 hsa-miR-378c 0 1 0
chr6:169248646|169248765 hsa-miR-4308 0 1 0
chr6:169248646|169248765 hsa-miR-378e 0 1 0
chr6:169248646|169248765 hsa-miR-378f 0 1 0
chr6:169248646|169248765 hsa-miR-378h 0 1 0
chr6:169248646|169248765 hsa-miR-378i 0 1 0
chr6:169248646|169248765 hsa-miR-8058 0 1 0
chr6:169248646|169248765 hsa-miR-8089 1 0 0
chr6:169248646|169248765 hsa-miR-128-1-5p 0 1 0
chr6:169248646|169248765 hsa-miR-139-3p 1 0 0
chr6:169248646|169248765 hsa-miR-6089 1 1 0
chr6:169248646|169248765 hsa-miR-615-5p 1 0 0
chr6:169248646|169248765 hsa-miR-149-3p 1 1 0
chr6:169248646|169248765 hsa-miR-450a-2-3p 0 1 0
chr6:169248646|169248765 hsa-miR-3074-5p 0 1 0
chr6:169248646|169248765 hsa-miR-6775-5p 1 0 0
chr6:169248646|169248765 hsa-miR-6779-5p 0 1 0
chr6:169248646|169248765 hsa-miR-6788-5p 0 1 0
chr6:169248646|169248765 hsa-miR-3620-5p 1 0 0
chr6:169248646|169248765 hsa-miR-10396a-5p 0 1 0
chr6:169248646|169248765 hsa-miR-378a-3p 0 1 0
chr6:169248646|169248765 hsa-miR-6762-5p 1 0 0
chr6:169248646|169248765 hsa-miR-6837-5p 0 1 0
chr6:169248646|169248765 hsa-miR-4691-5p 0 1 0
chr6:169248646|169248765 hsa-miR-378d 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr6:169248646|169248765
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MLALEGPGLSQRQFEIVSNGPADTLDL
Nucleotide Sequence CTGTTGGCTCTGGAGGGCCCCGGTCTCTCCCAGAGGCAGTTCGAGATCGTCTCCAACGGCCCCGCGGACACGCTGGATCTC

CircID chr6:169248646|169248765
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence METISNCLWERPGPSRANSVPLDLPSCLSWA
Nucleotide Sequence TTGGAGACGATCTCGAACTGCCTCTGGGAGAGACCGGGGCCCTCCAGAGCCAACAGCGTGCCCCTGGACTTGCCGTCCTGCTTGAGCTGGGCC

CircID chr6:169248646|169248765
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MPLGETGALQSQQRAPGLAVLLELG
Nucleotide Sequence CTGCCTCTGGGAGAGACCGGGGCCCTCCAGAGCCAACAGCGTGCCCCTGGACTTGCCGTCCTGCTTGAGCTGGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites