CircNet

General Information

circRNA Basic Information

CircID	chr6:17787776\|17796820
Strand	-
CircType	exon
Host Gene	ENSG00000137177.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	GACTATGTGGTGAATGTAACAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAACACTGCATGACAGGTGGAATGAAGTAACGCGAAGAATAGAAATGTGGATCTCCATATTAGAATTGAATGAGTTAGGAGAGTATGCTGCAGTGGAACTTCATCAGGCAAAAGATGTCAACACAGGAGGCATCTTTCAACTTAGACAGGGTCATTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGCAGCATTCAGGGACACTGCCACTTATGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACCAGGAAGAAGACTTAAACTGCGTAAGGGAGAGGTGGTCAGATGCACTCATTAAACGACGAGAATACCTGGATGAACAGATAAAAAAAGTCAGCAATAAAACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:17787776\|17796820
ORF Type	ORF1
Protein Length	175
Nucleotide Length	525
Protein Sequence	VVNVTEEFLEFISDGALAIEVWGHRCAGNGSSIWEVDSLHAKTRTLHDRWNEVTRRIEMWISILELNELGEYAAVELHQAKDVNTGGIFQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSVSIGCVTARSTKLQRGLDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKT
Nucleotide Sequence	GTGGTGAATGTAACAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAACACTGCATGACAGGTGGAATGAAGTAACGCGAAGAATAGAAATGTGGATCTCCATATTAGAATTGAATGAGTTAGGAGAGTATGCTGCAGTGGAACTTCATCAGGCAAAAGATGTCAACACAGGAGGCATCTTTCAACTTAGACAGGGTCATTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGCAGCATTCAGGGACACTGCCACTTATGGTTGAAGCCATCCTGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACCAGGAAGAAGACTTAAACTGCGTAAGGGAGAGGTGGTCAGATGCACTCATTAAACGACGAGAATACCTGGATGAACAGATAAAAAAAGTCAGCAATAAAACA

CircID	chr6:17787776\|17796820
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MLHRFHRDLYSTGMTLSKLKDASCVDIFCLMKFHCSILS*
Nucleotide Sequence	ATGCTGCACAGGTTTCACCGTGACTTGTACTCTACGGGAATGACCCTGTCTAAGTTGAAAGATGCCTCCTGTGTTGACATCTTTTGCCTGATGAAGTTCCACTGCAGCATACTCTCCTAA

CircID	chr6:17787776\|17796820
ORF Type	ORF3
Protein Length	40
Nucleotide Length	120
Protein Sequence	MEHWPLKYGATGVLEMAAPSGRSILFMLRQEHCMTGGMK*
Nucleotide Sequence	ATGGAGCACTGGCCATTGAAGTATGGGGCCACCGGTGTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAACACTGCATGACAGGTGGAATGAAGTAA

CircID	chr6:17787776\|17796820
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MQCSCLSMKRIDLPDGAAISSTPVAPYFNGQCSI*
Nucleotide Sequence	ATGCAGTGTTCTTGTCTTAGCATGAAGAGAATCGACCTCCCAGATGGAGCTGCCATTTCCAGCACACCGGTGGCCCCATACTTCAATGGCCAGTGCTCCATCTGA

CircID	chr6:17787776\|17796820
ORF Type	ORF5
Protein Length	34
Nucleotide Length	102
Protein Sequence	MELPFPAHRWPHTSMASAPSEMNSRNSSVTFTT*
Nucleotide Sequence	ATGGAGCTGCCATTTCCAGCACACCGGTGGCCCCATACTTCAATGGCCAGTGCTCCATCTGAAATGAACTCCAGAAATTCTTCTGTTACATTCACCACATAG

CircID	chr6:17787776\|17796820
ORF Type	ORF6
Protein Length	32
Nucleotide Length	96
Protein Sequence	MLQWNFIRQKMSTQEASFNLDRVIPVEYKSR*
Nucleotide Sequence	ATGCTGCAGTGGAACTTCATCAGGCAAAAGATGTCAACACAGGAGGCATCTTTCAACTTAGACAGGGTCATTCCCGTAGAGTACAAGTCACGGTGA

CircID	chr6:17787776\|17796820
ORF Type	ORF7
Protein Length	30
Nucleotide Length	90
Protein Sequence	MDTDRMASTISGSVPECCTGFTVTCTLRE*
Nucleotide Sequence	ATGGATACTGACAGGATGGCTTCAACCATAAGTGGCAGTGTCCCTGAATGCTGCACAGGTTTCACCGTGACTTGTACTCTACGGGAATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:17787776\|17796820	ELAVL1	1	0	2
chr6:17787776\|17796820	SF3B1	0	1	0
chr6:17787776\|17796820	RPS5	0	0	1
chr6:17787776\|17796820	TAF15	1	2	0
chr6:17787776\|17796820	FMR1	1	1	4
chr6:17787776\|17796820	CPSF2	0	1	0
chr6:17787776\|17796820	FUS	1	1	0
chr6:17787776\|17796820	SRSF1	0	0	1
chr6:17787776\|17796820	NOP58	1	1	4
chr6:17787776\|17796820	U2AF2	10	4	0
chr6:17787776\|17796820	DDX54	0	1	11
chr6:17787776\|17796820	GRWD1	0	0	1
chr6:17787776\|17796820	RBM10	1	0	0
chr6:17787776\|17796820	HNRNPC	6	9	0
chr6:17787776\|17796820	TRA2A	0	0	1
chr6:17787776\|17796820	DDX3X	0	1	0
chr6:17787776\|17796820	FXR1	0	0	1
chr6:17787776\|17796820	FXR2	0	1	2
chr6:17787776\|17796820	IGF2BP1	0	0	3
chr6:17787776\|17796820	IGF2BP2	1	0	7
chr6:17787776\|17796820	CSTF2T	0	0	1
chr6:17787776\|17796820	EIF4A3	2	5	5
chr6:17787776\|17796820	AGO2	0	0	2

CircRNA Information