CircRNA Information

General Information
circRNA Basic Information
CircID chr6:18140776|18140877
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTTCCTACACTGCCCTTCACCCCAGCTCCCAGGATCCTAAAGTCTATGTTATATTGCCCCCTCTTGGAGTGTGCCCCCAGTCCACACCCTAGAGTGTCACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:18140776|18140877 hsa-miR-34a-5p 0 0 1
chr6:18140776|18140877 hsa-miR-34a-3p 0 0 1
chr6:18140776|18140877 hsa-miR-376c-5p 0 0 1
chr6:18140776|18140877 hsa-miR-376c-3p 0 0 1
chr6:18140776|18140877 hsa-miR-449a 0 0 1
chr6:18140776|18140877 hsa-miR-410-5p 0 0 1
chr6:18140776|18140877 hsa-miR-410-3p 0 0 1
chr6:18140776|18140877 hsa-miR-608 1 0 1
chr6:18140776|18140877 hsa-miR-637 1 0 1
chr6:18140776|18140877 hsa-miR-651-5p 0 0 1
chr6:18140776|18140877 hsa-miR-651-3p 0 0 1
chr6:18140776|18140877 hsa-miR-449b-5p 0 0 1
chr6:18140776|18140877 hsa-miR-449b-3p 0 0 1
chr6:18140776|18140877 hsa-miR-920 1 0 1
chr6:18140776|18140877 hsa-miR-1288-5p 0 0 1
chr6:18140776|18140877 hsa-miR-1288-3p 0 0 1
chr6:18140776|18140877 hsa-miR-342-5p 0 0 1
chr6:18140776|18140877 hsa-miR-34c-5p 0 0 1
chr6:18140776|18140877 hsa-miR-1269 0 0 1
chr6:18140776|18140877 hsa-miR-422a 1 0 0
chr6:18140776|18140877 hsa-miR-762 1 0 0
chr6:18140776|18140877 hsa-miR-1183 1 0 0
chr6:18140776|18140877 hsa-miR-1262 1 0 0
chr6:18140776|18140877 hsa-miR-2861 1 0 0
chr6:18140776|18140877 hsa-miR-3154 1 0 0
chr6:18140776|18140877 hsa-miR-320e 1 0 0
chr6:18140776|18140877 hsa-miR-4300 1 0 0
chr6:18140776|18140877 hsa-miR-4314 1 0 0
chr6:18140776|18140877 hsa-miR-4259 1 0 0
chr6:18140776|18140877 hsa-miR-4281 1 0 0
chr6:18140776|18140877 hsa-miR-3652 1 0 0
chr6:18140776|18140877 hsa-miR-3908 1 0 0
chr6:18140776|18140877 hsa-miR-3911 1 0 0
chr6:18140776|18140877 hsa-miR-1268b 1 0 0
chr6:18140776|18140877 hsa-miR-4430 1 0 0
chr6:18140776|18140877 hsa-miR-4449 1 0 0
chr6:18140776|18140877 hsa-miR-4487 1 0 0
chr6:18140776|18140877 hsa-miR-4488 1 0 0
chr6:18140776|18140877 hsa-miR-4492 1 0 0
chr6:18140776|18140877 hsa-miR-4498 1 0 0
chr6:18140776|18140877 hsa-miR-4505 1 0 0
chr6:18140776|18140877 hsa-miR-4508 1 0 0
chr6:18140776|18140877 hsa-miR-1587 1 0 0
chr6:18140776|18140877 hsa-miR-4651 1 0 0
chr6:18140776|18140877 hsa-miR-4654 1 0 0
chr6:18140776|18140877 hsa-miR-4656 1 0 0
chr6:18140776|18140877 hsa-miR-4710 1 0 0
chr6:18140776|18140877 hsa-miR-4734 1 0 0
chr6:18140776|18140877 hsa-miR-5194 1 0 0
chr6:18140776|18140877 hsa-miR-5572 1 0 0
chr6:18140776|18140877 hsa-miR-5787 1 0 0
chr6:18140776|18140877 hsa-miR-6085 1 0 0
chr6:18140776|18140877 hsa-miR-6090 1 0 0
chr6:18140776|18140877 hsa-miR-8073 1 0 0
chr6:18140776|18140877 hsa-miR-8089 1 0 0
chr6:18140776|18140877 hsa-miR-12114 1 0 0
chr6:18140776|18140877 hsa-miR-4731-5p 1 0 0
chr6:18140776|18140877 hsa-miR-7155-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6747-5p 1 0 0
chr6:18140776|18140877 hsa-miR-7106-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6799-5p 1 0 0
chr6:18140776|18140877 hsa-miR-7851-3p 1 0 0
chr6:18140776|18140877 hsa-miR-3192-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6880-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4695-5p 1 0 0
chr6:18140776|18140877 hsa-miR-7160-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6741-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6721-5p 1 0 0
chr6:18140776|18140877 hsa-miR-23b-5p 1 0 0
chr6:18140776|18140877 hsa-miR-197-5p 1 0 0
chr6:18140776|18140877 hsa-miR-5589-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6776-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6742-5p 1 0 0
chr6:18140776|18140877 hsa-miR-3151-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6772-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6732-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6805-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6827-5p 1 0 0
chr6:18140776|18140877 hsa-miR-23a-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6881-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6782-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6874-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6852-5p 1 0 0
chr6:18140776|18140877 hsa-miR-1226-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4713-3p 1 0 0
chr6:18140776|18140877 hsa-miR-4787-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4446-3p 1 0 0
chr6:18140776|18140877 hsa-miR-423-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4661-3p 1 0 0
chr6:18140776|18140877 hsa-miR-4763-3p 1 0 0
chr6:18140776|18140877 hsa-miR-6787-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6812-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6870-5p 1 0 0
chr6:18140776|18140877 hsa-miR-5001-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6726-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6737-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6752-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6756-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6803-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6813-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6819-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6851-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6722-3p 1 0 0
chr6:18140776|18140877 hsa-miR-6751-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6763-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6779-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6788-5p 1 0 0
chr6:18140776|18140877 hsa-miR-3620-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6780b-5p 1 0 0
chr6:18140776|18140877 hsa-miR-10396b-5p 1 0 0
chr6:18140776|18140877 hsa-miR-10526-3p 1 0 0
chr6:18140776|18140877 hsa-miR-1237-5p 1 0 0
chr6:18140776|18140877 hsa-miR-328-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4649-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4725-3p 1 0 0
chr6:18140776|18140877 hsa-miR-4745-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6729-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6738-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6794-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6795-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6846-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6848-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6887-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4697-5p 1 0 0
chr6:18140776|18140877 hsa-miR-939-5p 1 0 0
chr6:18140776|18140877 hsa-miR-365a-5p 1 0 0
chr6:18140776|18140877 hsa-miR-1914-3p 1 0 0
chr6:18140776|18140877 hsa-miR-6855-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4700-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4646-5p 1 0 0
chr6:18140776|18140877 hsa-miR-4716-3p 1 0 0
chr6:18140776|18140877 hsa-miR-4667-5p 1 0 0
chr6:18140776|18140877 hsa-miR-5591-5p 1 0 0
chr6:18140776|18140877 hsa-miR-6762-5p 1 0 0
chr6:18140776|18140877 hsa-miR-769-3p 1 0 0
chr6:18140776|18140877 hsa-miR-5009-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:18140776|18140877
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MPFTPAPRILKSMLYCPLLECAPSPHPRVS
Nucleotide Sequence CTGCCCTTCACCCCAGCTCCCAGGATCCTAAAGTCTATGTTATATTGCCCCCTCTTGGAGTGTGCCCCCAGTCCACACCCTAGAGTGTCA
CircID chr6:18140776|18140877
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MGAHSKRGQYNIDFRILGAGVKGSVGK
Nucleotide Sequence CTGGGGGCACACTCCAAGAGGGGGCAATATAACATAGACTTTAGGATCCTGGGAGCTGGGGTGAAGGGCAGTGTAGGAAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab