CircNet

General Information

circRNA Basic Information

CircID	chr6:18225643\|18263996
Strand	-
CircType	exon
Host Gene	ENSG00000124795.14;
Algorism	CIRI2;DCC;
Sequence	GTTCACAGCATGTCCGCCTCGGCCCCTGCTGCGGAGGGGGAGGGAACCCCCACCCAGCCCGCGTCCGAGAAAGAACCCGAAATGCCCGGTCCCAGAGAGGAGAGCGAGGAGGAAGAGGACGAGGACGACGAGGAGGAGGAGGAGGAGGAAAAAGAAAAGAGTCTCATCGTGGAAGGCAAGAGGGAAAAGAAAAAAGTAGAGAGGTTGACAATGCAAGTCTCTTCCTTACAGAGAGAGCCATTTACAATTGCACAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:18225643\|18263996
ORF Type	ORF1
Protein Length	82
Nucleotide Length	246
Protein Sequence	MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTIAQ
Nucleotide Sequence	ATGTCCGCCTCGGCCCCTGCTGCGGAGGGGGAGGGAACCCCCACCCAGCCCGCGTCCGAGAAAGAACCCGAAATGCCCGGTCCCAGAGAGGAGAGCGAGGAGGAAGAGGACGAGGACGACGAGGAGGAGGAGGAGGAGGAAAAAGAAAAGAGTCTCATCGTGGAAGGCAAGAGGGAAAAGAAAAAAGTAGAGAGGTTGACAATGCAAGTCTCTTCCTTACAGAGAGAGCCATTTACAATTGCACAA

CircID	chr6:18225643\|18263996
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MRLFSFSSSSSSSSSSSSSSSLSSLGPGISGSFSDAGWVGVPSPSAAGAEADML*
Nucleotide Sequence	ATGAGACTCTTTTCTTTTTCCTCCTCCTCCTCCTCCTCGTCGTCCTCGTCCTCTTCCTCCTCGCTCTCCTCTCTGGGACCGGGCATTTCGGGTTCTTTCTCGGACGCGGGCTGGGTGGGGGTTCCCTCCCCCTCCGCAGCAGGGGCCGAGGCGGACATGCTGTGA

CircID	chr6:18225643\|18263996
ORF Type	ORF3
Protein Length	72
Nucleotide Length	216
Protein Sequence	LHCQPLYFFLFPLAFHDETLFFFLLLLLLVVLVLFLLALLSGTGHFGFFLGRGLGGGSLPLRSRGRGGHAVN
Nucleotide Sequence	TTGCATTGTCAACCTCTCTACTTTTTTCTTTTCCCTCTTGCCTTCCACGATGAGACTCTTTTCTTTTTCCTCCTCCTCCTCCTCCTCGTCGTCCTCGTCCTCTTCCTCCTCGCTCTCCTCTCTGGGACCGGGCATTTCGGGTTCTTTCTCGGACGCGGGCTGGGTGGGGGTTCCCTCCCCCTCCGCAGCAGGGGCCGAGGCGGACATGCTGTGAAC

CircID	chr6:18225643\|18263996
ORF Type	ORF4
Protein Length	66
Nucleotide Length	198
Protein Sequence	FTACPPRPLLRRGREPPPSPRPRKNPKCPVPERRARRKRTRTTRRRRRRKKKRVSSWKARGKRKK*
Nucleotide Sequence	TTCACAGCATGTCCGCCTCGGCCCCTGCTGCGGAGGGGGAGGGAACCCCCACCCAGCCCGCGTCCGAGAAAGAACCCGAAATGCCCGGTCCCAGAGAGGAGAGCGAGGAGGAAGAGGACGAGGACGACGAGGAGGAGGAGGAGGAGGAAAAAGAAAAGAGTCTCATCGTGGAAGGCAAGAGGGAAAAGAAAAAAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:18225643\|18263996	KHSRP	0	2	0
chr6:18225643\|18263996	MOV10	2	37	0
chr6:18225643\|18263996	NCBP2	1	0	0
chr6:18225643\|18263996	NCBP3	1	1	1
chr6:18225643\|18263996	PRPF8	8	0	3
chr6:18225643\|18263996	SRSF10	0	3	0
chr6:18225643\|18263996	TNRC6A	1	2	0
chr6:18225643\|18263996	CAPRIN1	1	15	0
chr6:18225643\|18263996	NUDT21	5	14	0
chr6:18225643\|18263996	RBM15B	1	9	0
chr6:18225643\|18263996	TROVE2	0	4	0
chr6:18225643\|18263996	GNL3	0	4	0
chr6:18225643\|18263996	DGCR8	2	8	1
chr6:18225643\|18263996	EIF3A	1	0	0
chr6:18225643\|18263996	EIF3B	2	0	0
chr6:18225643\|18263996	STAU1	0	8	0
chr6:18225643\|18263996	EIF3D	2	0	0
chr6:18225643\|18263996	EIF3G	1	0	0
chr6:18225643\|18263996	GRWD1	1	0	0
chr6:18225643\|18263996	MBNL1	0	1	0
chr6:18225643\|18263996	PTBP1	5	18	3
chr6:18225643\|18263996	DDX3X	22	60	4
chr6:18225643\|18263996	LARP7	1	1	3
chr6:18225643\|18263996	ACIN1	0	1	2
chr6:18225643\|18263996	RANGAP1	2	0	5
chr6:18225643\|18263996	FXR1	2	9	2
chr6:18225643\|18263996	FXR2	3	17	4
chr6:18225643\|18263996	TIA1	0	44	0
chr6:18225643\|18263996	BUD13	6	0	5
chr6:18225643\|18263996	GTF2F1	5	5	0
chr6:18225643\|18263996	RBM47	0	12	1
chr6:18225643\|18263996	SLTM	5	0	2
chr6:18225643\|18263996	EIF4G2	2	2	4
chr6:18225643\|18263996	EIF4G1	0	5	0
chr6:18225643\|18263996	DDX42	2	2	0
chr6:18225643\|18263996	CSTF2T	6	15	3
chr6:18225643\|18263996	VIM	1	0	3
chr6:18225643\|18263996	DDX6	0	5	0
chr6:18225643\|18263996	RNF219	1	1	0
chr6:18225643\|18263996	TIAL1	1	44	0
chr6:18225643\|18263996	UPF1	1	88	0
chr6:18225643\|18263996	YWHAG	1	2	1
chr6:18225643\|18263996	YBX3	0	2	0
chr6:18225643\|18263996	SLBP	0	1	0
chr6:18225643\|18263996	ELAVL1	7	101	4
chr6:18225643\|18263996	ELAVL3	0	3	0
chr6:18225643\|18263996	FUBP3	0	7	0
chr6:18225643\|18263996	KHDRBS1	0	7	0
chr6:18225643\|18263996	CELF2	0	6	0
chr6:18225643\|18263996	PUM2	0	20	0
chr6:18225643\|18263996	YTHDF2	1	14	0
chr6:18225643\|18263996	YTHDF1	0	17	0
chr6:18225643\|18263996	SRSF7	2	2	1
chr6:18225643\|18263996	SRSF1	8	22	19
chr6:18225643\|18263996	SRSF3	0	1	0
chr6:18225643\|18263996	SUB1	0	5	0
chr6:18225643\|18263996	U2AF1	6	4	3
chr6:18225643\|18263996	ADAR	0	2	0
chr6:18225643\|18263996	U2AF2	7	50	10
chr6:18225643\|18263996	SRSF9	3	0	2
chr6:18225643\|18263996	DDX54	6	8	7
chr6:18225643\|18263996	DDX55	0	1	0
chr6:18225643\|18263996	EFTUD2	2	0	0
chr6:18225643\|18263996	PCBP2	4	0	0
chr6:18225643\|18263996	SF3A3	3	3	0
chr6:18225643\|18263996	ZNF184	2	3	4
chr6:18225643\|18263996	XRN2	4	0	1
chr6:18225643\|18263996	LIN28B	4	29	0
chr6:18225643\|18263996	LIN28A	1	13	0
chr6:18225643\|18263996	BCCIP	6	0	2
chr6:18225643\|18263996	FTO	1	0	0
chr6:18225643\|18263996	RBFOX2	3	15	3
chr6:18225643\|18263996	RBPMS	0	2	0
chr6:18225643\|18263996	SAFB2	0	3	1
chr6:18225643\|18263996	RBM27	0	4	0
chr6:18225643\|18263996	WDR33	0	9	0
chr6:18225643\|18263996	HNRNPK	0	2	0
chr6:18225643\|18263996	YTHDF3	0	2	0
chr6:18225643\|18263996	AIFM1	4	0	2
chr6:18225643\|18263996	ATXN2	1	35	1
chr6:18225643\|18263996	EIF4A3	4	6	4
chr6:18225643\|18263996	AGO2	0	62	3
chr6:18225643\|18263996	FAM120A	5	13	2
chr6:18225643\|18263996	CNBP	1	8	0
chr6:18225643\|18263996	RPS3	2	0	0
chr6:18225643\|18263996	TAF15	2	16	0
chr6:18225643\|18263996	FUS	0	21	0
chr6:18225643\|18263996	HNRNPU	0	9	0
chr6:18225643\|18263996	ZNF622	2	0	0
chr6:18225643\|18263996	IGF2BP1	1	55	2
chr6:18225643\|18263996	AKAP8L	2	0	0
chr6:18225643\|18263996	RBM10	5	3	0
chr6:18225643\|18263996	HNRNPM	0	1	0
chr6:18225643\|18263996	RBM15	1	2	0
chr6:18225643\|18263996	HNRNPC	6	86	2
chr6:18225643\|18263996	HNRNPD	0	8	0
chr6:18225643\|18263996	HNRNPF	0	2	0
chr6:18225643\|18263996	PUS1	0	1	0
chr6:18225643\|18263996	LARP4B	0	3	0
chr6:18225643\|18263996	SMNDC1	5	5	2
chr6:18225643\|18263996	AUH	5	0	4
chr6:18225643\|18263996	HNRNPA1	0	22	0
chr6:18225643\|18263996	SND1	1	8	2
chr6:18225643\|18263996	UCHL5	1	0	0
chr6:18225643\|18263996	IGF2BP3	2	38	3
chr6:18225643\|18263996	IGF2BP2	3	55	4
chr6:18225643\|18263996	MBNL2	0	4	0
chr6:18225643\|18263996	HNRNPUL1	0	6	0
chr6:18225643\|18263996	TARDBP	2	28	2
chr6:18225643\|18263996	YTHDC1	3	23	0
chr6:18225643\|18263996	YTHDC2	0	1	0
chr6:18225643\|18263996	DICER1	5		0
chr6:18225643\|18263996	RTCB	0		0
chr6:18225643\|18263996	ZFP36	0		0
chr6:18225643\|18263996	FBL	7		5
chr6:18225643\|18263996	RBM6	0		0
chr6:18225643\|18263996	RBM5	0		0
chr6:18225643\|18263996	NUMA1	3		2
chr6:18225643\|18263996	SF3B4	6		0
chr6:18225643\|18263996	FMR1	5		7
chr6:18225643\|18263996	CPSF7	2		0
chr6:18225643\|18263996	CPSF6	1		3
chr6:18225643\|18263996	CPSF4	2		0
chr6:18225643\|18263996	CPSF3	1		0
chr6:18225643\|18263996	CPSF1	0		0
chr6:18225643\|18263996	NOP58	2		4
chr6:18225643\|18263996	RC3H1	0
chr6:18225643\|18263996	NOP56
chr6:18225643\|18263996	LSM11
chr6:18225643\|18263996	HNRNPA2B1
chr6:18225643\|18263996	FIP1L1
chr6:18225643\|18263996	TRA2A
chr6:18225643\|18263996	ZC3H7B
chr6:18225643\|18263996	SBDS
chr6:18225643\|18263996	MSI2
chr6:18225643\|18263996	MSI1
chr6:18225643\|18263996	NPM1
chr6:18225643\|18263996	ALKBH5
chr6:18225643\|18263996	AGO1
chr6:18225643\|18263996	AARS
chr6:18225643\|18263996	SRRM4
chr6:18225643\|18263996	CSTF2
chr6:18225643\|18263996	NONO
chr6:18225643\|18263996	AGO3
chr6:18225643\|18263996	DKC1
chr6:18225643\|18263996	EWSR1
chr6:18225643\|18263996	ILF3

CircRNA Information