CircNet

General Information

circRNA Basic Information

CircID	chr6:25500166\|25540078
Strand	+
CircType	exon
Host Gene	ENSG00000079691.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGCACTGTTATTGGGCCTGGCTTGTAATCATAACTTGAAAGGGGTTTCTCTGGATCTCAGCAACTGTGAGCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTGCATTGCTGAAATACACAACATCACCAGCTTAGACATCTCTGACAATGTTGTTACCAAATTTATACCATGTTGGTGGTGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAGAAGTTACAAGAGTAGTAGATGAACAACTAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:25500166\|25540078	hsa-miR-138-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:25500166\|25540078
ORF Type	ORF1
Protein Length	45
Nucleotide Length	135
Protein Sequence	MLLPNLYHVGGASWAGASGLLSSPIQETLESMAGEVTRVVDEQLK
Nucleotide Sequence	ATGTTGTTACCAAATTTATACCATGTTGGTGGTGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAGAAGTTACAAGAGTAGTAGATGAACAACTAAAG

CircID	chr6:25500166\|25540078
ORF Type	ORF2
Protein Length	88
Nucleotide Length	264
Protein Sequence	LGLACNHNLKGVSLDLSNCELRSGGAQVLEGCIAEIHNITSLDISDNVVTKFIPCWWCILGGSQWLTIQSNSGDPGINGWRSYKSSR*
Nucleotide Sequence	TTGGGCCTGGCTTGTAATCATAACTTGAAAGGGGTTTCTCTGGATCTCAGCAACTGTGAGCTGAGATCAGGAGGTGCTCAAGTATTAGAAGGTTGCATTGCTGAAATACACAACATCACCAGCTTAGACATCTCTGACAATGTTGTTACCAAATTTATACCATGTTGGTGGTGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAGAAGTTACAAGAGTAGTAGATGA

CircID	chr6:25500166\|25540078
ORF Type	ORF3
Protein Length	33
Nucleotide Length	99
Protein Sequence	MHHQHGINLVTTLSEMSKLVMLCISAMQPSNT*
Nucleotide Sequence	ATGCACCACCAACATGGTATAAATTTGGTAACAACATTGTCAGAGATGTCTAAGCTGGTGATGTTGTGTATTTCAGCAATGCAACCTTCTAATACTTGA

CircID	chr6:25500166\|25540078
ORF Type	ORF4
Protein Length	32
Nucleotide Length	96
Protein Sequence	MLVVHLGREPVAYYPVQFRRPWNQWLEKLQE*
Nucleotide Sequence	ATGTTGGTGGTGCATCTTGGGCGGGAGCCAGTGGCTTACTATCCAGTCCAATTCAGGAGACCCTGGAATCAATGGCTGGAGAAGTTACAAGAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:25500166\|25540078	FMR1	1	0	0
chr6:25500166\|25540078	FUS	0	1	0
chr6:25500166\|25540078	PRPF8	0	0	1
chr6:25500166\|25540078	TAF15	1	0	0
chr6:25500166\|25540078	CAPRIN1	0	1	0
chr6:25500166\|25540078	CPSF7	2	1	0
chr6:25500166\|25540078	ELAVL1	0	3	0
chr6:25500166\|25540078	NOP58	0	0	2
chr6:25500166\|25540078	U2AF2	12	5	1
chr6:25500166\|25540078	DDX54	0	0	5
chr6:25500166\|25540078	SF3A3	1	0	0
chr6:25500166\|25540078	FIP1L1	2	1	0
chr6:25500166\|25540078	PTBP1	1	0	0
chr6:25500166\|25540078	HNRNPC	1	1	0
chr6:25500166\|25540078	DDX3X	2	0	0
chr6:25500166\|25540078	TARDBP	4	0	0
chr6:25500166\|25540078	CNBP	0	0	1
chr6:25500166\|25540078	CSTF2T	1	0	1
chr6:25500166\|25540078	CSTF2	1	0	0
chr6:25500166\|25540078	DKC1	0	1	0
chr6:25500166\|25540078	AGO2	0	0	1
chr6:25500166\|25540078	EIF4A3	0	4	6
chr6:25500166\|25540078	FBL	1	0	0

CircRNA Information