CircNet

General Information

circRNA Basic Information

CircID	chr6:25515675\|25528893
Strand	+
CircType	exon
Host Gene	ENSG00000079691.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	CCTCTGCAGTCCTTGTCCCTGGCTGACTCGAAACTCAAGACTGAGGTCACCATCATCATCAATGCCCTGGGAAGCAACACCTCCCTGACCAAAGTGGACATTAGCGGCAACGGAATGGGGGACATGGGAGCGAAGATGCTGGCCAAAGCACTGCAGATCAACACTAAGCTCAGGACTGTAATATGGGACAAGAACAACATCACTGCACAAGGCTTTCAGGATATAGCTGTTGCTATGGAAAAGAACTACACATTAAGATTTATGCCAATTCCTATGTATGATGCTTCTCAAGCCCTAAAAACAAACCCTGAAAAAACAGAAGACGCTCTGCAAAAGATAGAAAACTACCTGCTACGAAATCACGAGACTAGAAAATACCTTCAAGAGCAGGCCTACCGCCTGCAGCAGGGTATTGTCACCAGCACCACCCAGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:25515675\|25528893	hsa-miR-143-5p	0	1	1
chr6:25515675\|25528893	hsa-miR-17-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:25515675\|25528893
ORF Type	ORF1
Protein Length	107
Nucleotide Length	321
Protein Sequence	MGDMGAKMLAKALQINTKLRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTNPEKTEDALQKIENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQ
Nucleotide Sequence	ATGGGGGACATGGGAGCGAAGATGCTGGCCAAAGCACTGCAGATCAACACTAAGCTCAGGACTGTAATATGGGACAAGAACAACATCACTGCACAAGGCTTTCAGGATATAGCTGTTGCTATGGAAAAGAACTACACATTAAGATTTATGCCAATTCCTATGTATGATGCTTCTCAAGCCCTAAAAACAAACCCTGAAAAAACAGAAGACGCTCTGCAAAAGATAGAAAACTACCTGCTACGAAATCACGAGACTAGAAAATACCTTCAAGAGCAGGCCTACCGCCTGCAGCAGGGTATTGTCACCAGCACCACCCAGCAG

CircID	chr6:25515675\|25528893
ORF Type	ORF2
Protein Length	66
Nucleotide Length	198
Protein Sequence	MLFLSHITVLSLVLICSALASIFAPMSPIPLPLMSTLVREVLLPRALMMMVTSVLSFESARDKDCR
Nucleotide Sequence	ATGTTGTTCTTGTCCCATATTACAGTCCTGAGCTTAGTGTTGATCTGCAGTGCTTTGGCCAGCATCTTCGCTCCCATGTCCCCCATTCCGTTGCCGCTAATGTCCACTTTGGTCAGGGAGGTGTTGCTTCCCAGGGCATTGATGATGATGGTGACCTCAGTCTTGAGTTTCGAGTCAGCCAGGGACAAGGACTGCAGA

CircID	chr6:25515675\|25528893
ORF Type	ORF3
Protein Length	33
Nucleotide Length	99
Protein Sequence	MGQEQHHCTRLSGYSCCYGKELHIKIYANSYV*
Nucleotide Sequence	ATGGGACAAGAACAACATCACTGCACAAGGCTTTCAGGATATAGCTGTTGCTATGGAAAAGAACTACACATTAAGATTTATGCCAATTCCTATGTATGA

CircID	chr6:25515675\|25528893
ORF Type	ORF4
Protein Length	70
Nucleotide Length	210
Protein Sequence	LCSDVVLVPYYSPELSVDLQCFGQHLRSHVPHSVAANVHFGQGGVASQGIDDDGDLSLEFRVSQGQGLQR
Nucleotide Sequence	TTGTGCAGTGATGTTGTTCTTGTCCCATATTACAGTCCTGAGCTTAGTGTTGATCTGCAGTGCTTTGGCCAGCATCTTCGCTCCCATGTCCCCCATTCCGTTGCCGCTAATGTCCACTTTGGTCAGGGAGGTGTTGCTTCCCAGGGCATTGATGATGATGGTGACCTCAGTCTTGAGTTTCGAGTCAGCCAGGGACAAGGACTGCAGAGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:25515675\|25528893	FBL	1	0	2
chr6:25515675\|25528893	SRSF1	0	0	2
chr6:25515675\|25528893	ELAVL1	3	0	1
chr6:25515675\|25528893	SF3B4	2	0	0
chr6:25515675\|25528893	HNRNPA1	0	3	0
chr6:25515675\|25528893	NOP56	1	0	0
chr6:25515675\|25528893	CSTF2T	1	1	0
chr6:25515675\|25528893	DDX54	0	0	2
chr6:25515675\|25528893	FUS	0	1	0
chr6:25515675\|25528893	RBM10	1	1	0
chr6:25515675\|25528893	CPSF1	1	0	0
chr6:25515675\|25528893	HNRNPC	0	2	0
chr6:25515675\|25528893	NOP58	0	1	3
chr6:25515675\|25528893	U2AF2	10	1	0
chr6:25515675\|25528893	IGF2BP2	0	0	3
chr6:25515675\|25528893	NUDT21	1	0	0
chr6:25515675\|25528893	EIF4A3	2	3	8
chr6:25515675\|25528893	AGO2	1	0	1

CircRNA Information