CircNet

General Information

circRNA Basic Information

CircID	chr6:28903979\|28904170
Strand	-
CircType	exon
Host Gene	ENSG00000204713.9;
Algorism	CIRI2;
Sequence	CCAGCTGTGACAGGACGTGGCAAGGCAACAAGATGCCTTGTGCCTGGCGTAGGATTACAGCCAACAGCCCTTTTGGCCTGAATTCACCTCCTCAAGGGGAGGTCTCCATGGAATGACCATGATTCCCAACATGGCCAGAAAACCCATCTATCCCACTCATGGGGCAGATGATCAGAGGAGCTGCACTTTTCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:28903979\|28904170	hsa-miR-17-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-17-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-20a-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-20a-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-93-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-93-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-106a-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-106a-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-106b-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-106b-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-20b-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-20b-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-519d-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-519d-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-629-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-629-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-647	0	0	1
chr6:28903979\|28904170	hsa-miR-1301-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-1301-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-769-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-1224-5p	0	0	1
chr6:28903979\|28904170	hsa-miR-1207-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-324-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-519b-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-519c-3p	0	0	1
chr6:28903979\|28904170	hsa-miR-500	0	0	1
chr6:28903979\|28904170	hsa-miR-519a	0	0	1
chr6:28903979\|28904170	hsa-miR-617	0	1	0
chr6:28903979\|28904170	hsa-miR-762	1	0	0
chr6:28903979\|28904170	hsa-miR-4269	0	1	0
chr6:28903979\|28904170	hsa-miR-4425	0	1	0
chr6:28903979\|28904170	hsa-miR-4452	0	1	0
chr6:28903979\|28904170	hsa-miR-4457	0	1	0
chr6:28903979\|28904170	hsa-miR-4481	0	1	0
chr6:28903979\|28904170	hsa-miR-4656	1	0	0
chr6:28903979\|28904170	hsa-miR-4673	0	1	0
chr6:28903979\|28904170	hsa-miR-7974	0	1	0
chr6:28903979\|28904170	hsa-miR-6765-5p	1	0	0
chr6:28903979\|28904170	hsa-miR-6857-5p	1	1	0
chr6:28903979\|28904170	hsa-miR-1972	1	1	0
chr6:28903979\|28904170	hsa-miR-4687-3p	1	1	0
chr6:28903979\|28904170	hsa-miR-4755-3p	0	1	0
chr6:28903979\|28904170	hsa-miR-3189-5p	0	1	0
chr6:28903979\|28904170	hsa-miR-6780a-3p	0	1	0
chr6:28903979\|28904170	hsa-miR-6736-3p	0	1	0
chr6:28903979\|28904170	hsa-miR-6839-3p	0	1	0
chr6:28903979\|28904170	hsa-miR-1537-5p	0	1	0
chr6:28903979\|28904170	hsa-miR-6752-5p	1	0	0
chr6:28903979\|28904170	hsa-miR-6851-5p	0	1	0
chr6:28903979\|28904170	hsa-miR-6858-5p	0	1	0
chr6:28903979\|28904170	hsa-miR-1238-5p	0	1	0
chr6:28903979\|28904170	hsa-miR-4758-5p	0	1	0
chr6:28903979\|28904170	hsa-miR-4769-5p	0	1	0
chr6:28903979\|28904170	hsa-miR-3059-5p	1	0	0
chr6:28903979\|28904170	hsa-miR-6715b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:28903979\|28904170
ORF Type	ORF1
Protein Length	26
Nucleotide Length	78
Protein Sequence	MTMIPNMARKPIYPTHGADDQRSCTF
Nucleotide Sequence	ATGACCATGATTCCCAACATGGCCAGAAAACCCATCTATCCCACTCATGGGGCAGATGATCAGAGGAGCTGCACTTTT

CircID	chr6:28903979\|28904170
ORF Type	ORF2
Protein Length	27
Nucleotide Length	84
Protein Sequence	MPCAWRRITANSPFGLNSPPQGEVSME
Nucleotide Sequence	ATGCCTTGTGCCTGGCGTAGGATTACAGCCAACAGCCCTTTTGGCCTGAATTCACCTCCTCAAGGGGAGGTCTCCATGGAATGA

CircID	chr6:28903979\|28904170
ORF Type	ORF3
Protein Length	30
Nucleotide Length	93
Protein Sequence	MGFLAMLGIMVIPWRPPLEEVNSGQKGCWL
Nucleotide Sequence	ATGGGTTTTCTGGCCATGTTGGGAATCATGGTCATTCCATGGAGACCTCCCCTTGAGGAGGTGAATTCAGGCCAAAAGGGCTGTTGGCTGTAA

CircID	chr6:28903979\|28904170
ORF Type	ORF4
Protein Length	27
Nucleotide Length	84
Protein Sequence	MPHEWDRWVFWPCWESWSFHGDLPLRR
Nucleotide Sequence	CTGCCCCATGAGTGGGATAGATGGGTTTTCTGGCCATGTTGGGAATCATGGTCATTCCATGGAGACCTCCCCTTGAGGAGGTGA

CircID	chr6:28903979\|28904170
ORF Type	ORF5
Protein Length	27
Nucleotide Length	84
Protein Sequence	MIICPMSGIDGFSGHVGNHGHSMETSP
Nucleotide Sequence	CTGATCATCTGCCCCATGAGTGGGATAGATGGGTTTTCTGGCCATGTTGGGAATCATGGTCATTCCATGGAGACCTCCCCTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information