CircNet

General Information

circRNA Basic Information

CircID	chr6:29613243\|29621292
Strand	-
CircType	exon
Host Gene	ENSG00000204681.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGTACAAGGAGCGTCTCTTTGGGAAGAAGTACGTCTGGTTCCTCATTGGGTGGTATGCTGACAATTGGTTCAAGATCTACGACCCTTCTATCAACTGCACAGTGGATGAGATGACTGAGGCGGTGGAGGGCCACATCACAACTGAGATTGTCATGCTGAATCCTGCCAATACCCGCAGCATTTCCAACATGACATCCCAGGAATTTGTGGAGAAACTAACCAAGCGACTGAAAAGACACCCTGAGGAGACAGGAGGCTTCCAGGAGGCACCGCTGGCCTATGATGCCATCTGGGCCTTGGCACTGGCCCTGAACAAGACATCTGGAGGAGGCGGCCGTTCTGGTGTGCGCCTGGAGGACTTCAACTACAACAACCAGACCATTACCGACCAAATCTACCGGGCAATGAACTCTTCGTCCTTTGAGGGTGTCTCT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:29613243\|29621292	hsa-miR-29b-1-5p	0	1	1
chr6:29613243\|29621292	hsa-miR-212-5p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:29613243\|29621292
ORF Type	ORF1
Protein Length	108
Nucleotide Length	324
Protein Sequence	MTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPLAYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVS
Nucleotide Sequence	ATGACTGAGGCGGTGGAGGGCCACATCACAACTGAGATTGTCATGCTGAATCCTGCCAATACCCGCAGCATTTCCAACATGACATCCCAGGAATTTGTGGAGAAACTAACCAAGCGACTGAAAAGACACCCTGAGGAGACAGGAGGCTTCCAGGAGGCACCGCTGGCCTATGATGCCATCTGGGCCTTGGCACTGGCCCTGAACAAGACATCTGGAGGAGGCGGCCGTTCTGGTGTGCGCCTGGAGGACTTCAACTACAACAACCAGACCATTACCGACCAAATCTACCGGGCAATGAACTCTTCGTCCTTTGAGGGTGTCTCT

CircID	chr6:29613243\|29621292
ORF Type	ORF2
Protein Length	57
Nucleotide Length	171
Protein Sequence	MSCSGPVPRPRWHHRPAVPPGSLLSPQGVFSVAWLVSPQIPGMSCWKCCGYWQDSA*
Nucleotide Sequence	ATGTCTTGTTCAGGGCCAGTGCCAAGGCCCAGATGGCATCATAGGCCAGCGGTGCCTCCTGGAAGCCTCCTGTCTCCTCAGGGTGTCTTTTCAGTCGCTTGGTTAGTTTCTCCACAAATTCCTGGGATGTCATGTTGGAAATGCTGCGGGTATTGGCAGGATTCAGCATGA

CircID	chr6:29613243\|29621292
ORF Type	ORF3
Protein Length	38
Nucleotide Length	114
Protein Sequence	MLEMLRVLAGFSMTISVVMWPSTASVISSTVQLIEGS*
Nucleotide Sequence	ATGTTGGAAATGCTGCGGGTATTGGCAGGATTCAGCATGACAATCTCAGTTGTGATGTGGCCCTCCACCGCCTCAGTCATCTCATCCACTGTGCAGTTGATAGAAGGGTCGTAG

CircID	chr6:29613243\|29621292
ORF Type	ORF4
Protein Length	59
Nucleotide Length	177
Protein Sequence	LVGNGLVVVVEVLQAHTRTAASSRCLVQGQCQGPDGIIGQRCLLEASCLLRVSFQSLG*
Nucleotide Sequence	TTGGTCGGTAATGGTCTGGTTGTTGTAGTTGAAGTCCTCCAGGCGCACACCAGAACGGCCGCCTCCTCCAGATGTCTTGTTCAGGGCCAGTGCCAAGGCCCAGATGGCATCATAGGCCAGCGGTGCCTCCTGGAAGCCTCCTGTCTCCTCAGGGTGTCTTTTCAGTCGCTTGGTTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:29613243\|29621292	U2AF2	1	3	0
chr6:29613243\|29621292	MOV10	0	0	1
chr6:29613243\|29621292	FUS	5	1	1
chr6:29613243\|29621292	PRPF8	0	4	0
chr6:29613243\|29621292	CPSF6	1	0	0
chr6:29613243\|29621292	ELAVL1	2	2	0
chr6:29613243\|29621292	GNL3	1	0	0
chr6:29613243\|29621292	DGCR8	0	1	1
chr6:29613243\|29621292	SRSF1	3	1	4
chr6:29613243\|29621292	NOP58	2	2	5
chr6:29613243\|29621292	U2AF1	0	1	2
chr6:29613243\|29621292	ADAR	0	1	0
chr6:29613243\|29621292	NOP56	0	0	1
chr6:29613243\|29621292	HNRNPA2B1	0	0	1
chr6:29613243\|29621292	PTBP1	0	2	0
chr6:29613243\|29621292	HNRNPC	10	2	0
chr6:29613243\|29621292	TRA2A	1	2	1
chr6:29613243\|29621292	ZNF184	1	0	1
chr6:29613243\|29621292	LARP7	2	0	0
chr6:29613243\|29621292	ACIN1	2	0	0
chr6:29613243\|29621292	LIN28B	2	0	0
chr6:29613243\|29621292	RANGAP1	0	1	0
chr6:29613243\|29621292	IGF2BP2	5	0	6
chr6:29613243\|29621292	NPM1	0	0	1
chr6:29613243\|29621292	TARDBP	14	1	1
chr6:29613243\|29621292	AIFM1	1	1	0
chr6:29613243\|29621292	EIF4G2	1	1	0
chr6:29613243\|29621292	CSTF2T	1	0	0
chr6:29613243\|29621292	RBM27	1	0	0
chr6:29613243\|29621292	RBM22	1	2	0
chr6:29613243\|29621292	TIAL1	0	1	0
chr6:29613243\|29621292	FBL	1	3	4
chr6:29613243\|29621292	EIF4A3	7	3	6
chr6:29613243\|29621292	AGO2	2	0	3

CircRNA Information