CircRNA Information

General Information
circRNA Basic Information
CircID chr6:30184886|30185118
Strand -
CircType exon
Host Gene ENSG00000234127.7;
Algorism CIRI2;
Sequence CTGGTGGGCTTGTGGCCTCCTGCTGCCTTCCTTTCCCTGTCTTCCCATCTCCACTCTCTCCTAGGAAAGTGGAACCTGGATGCTGGTAGGGCCAGAGACAGAGGCTTAACACCCTGCTGGGGAACCCGGTCAGAACTCCCGAGGCAGGAGAGGTTCTGCTCCACTGGATGTTTGTCTTGGTGTTTTTGGATGTGCTGATCAAGAGCAAGATGTTCTGGATTCTTAAAACTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:30184886|30185118 hsa-miR-214-5p 0 0 1
chr6:30184886|30185118 hsa-miR-214-3p 0 0 1
chr6:30184886|30185118 hsa-miR-185-5p 0 0 1
chr6:30184886|30185118 hsa-miR-185-3p 0 0 1
chr6:30184886|30185118 hsa-miR-383-5p 0 0 1
chr6:30184886|30185118 hsa-miR-383-3p 0 0 1
chr6:30184886|30185118 hsa-miR-328-5p 0 0 1
chr6:30184886|30185118 hsa-miR-328-3p 0 0 1
chr6:30184886|30185118 hsa-miR-326 0 0 1
chr6:30184886|30185118 hsa-miR-384 0 0 1
chr6:30184886|30185118 hsa-miR-593-5p 0 0 1
chr6:30184886|30185118 hsa-miR-593-3p 0 0 1
chr6:30184886|30185118 hsa-miR-609 0 0 1
chr6:30184886|30185118 hsa-miR-620 0 0 1
chr6:30184886|30185118 hsa-miR-634 0 0 1
chr6:30184886|30185118 hsa-miR-1291 0 0 1
chr6:30184886|30185118 hsa-miR-1270 0 1 1
chr6:30184886|30185118 hsa-miR-1825 0 0 1
chr6:30184886|30185118 hsa-miR-199a-5p 0 0 1
chr6:30184886|30185118 hsa-miR-199b-5p 0 0 1
chr6:30184886|30185118 hsa-miR-338-3p 0 1 1
chr6:30184886|30185118 hsa-miR-330-5p 0 0 1
chr6:30184886|30185118 hsa-miR-7 0 0 1
chr6:30184886|30185118 hsa-miR-1826 0 0 1
chr6:30184886|30185118 hsa-miR-623 1 0 0
chr6:30184886|30185118 hsa-miR-761 0 1 0
chr6:30184886|30185118 hsa-miR-665 1 0 0
chr6:30184886|30185118 hsa-miR-3153 0 1 0
chr6:30184886|30185118 hsa-miR-3714 0 1 0
chr6:30184886|30185118 hsa-miR-4644 0 1 0
chr6:30184886|30185118 hsa-miR-4689 1 0 0
chr6:30184886|30185118 hsa-miR-4739 1 0 0
chr6:30184886|30185118 hsa-miR-6127 1 1 0
chr6:30184886|30185118 hsa-miR-6165 0 1 0
chr6:30184886|30185118 hsa-miR-12115 1 1 0
chr6:30184886|30185118 hsa-miR-511-5p 0 1 0
chr6:30184886|30185118 hsa-miR-6757-5p 1 0 0
chr6:30184886|30185118 hsa-miR-4695-5p 1 1 0
chr6:30184886|30185118 hsa-miR-6744-5p 1 0 0
chr6:30184886|30185118 hsa-miR-4722-5p 1 1 0
chr6:30184886|30185118 hsa-miR-23b-5p 0 1 0
chr6:30184886|30185118 hsa-miR-197-5p 1 0 0
chr6:30184886|30185118 hsa-miR-6845-3p 0 1 0
chr6:30184886|30185118 hsa-miR-6871-5p 1 0 0
chr6:30184886|30185118 hsa-miR-23a-5p 1 1 0
chr6:30184886|30185118 hsa-miR-7109-3p 1 1 0
chr6:30184886|30185118 hsa-miR-6763-3p 1 0 0
chr6:30184886|30185118 hsa-miR-4693-3p 0 1 0
chr6:30184886|30185118 hsa-miR-204-3p 1 0 0
chr6:30184886|30185118 hsa-miR-193b-5p 0 1 0
chr6:30184886|30185118 hsa-miR-6771-5p 1 0 0
chr6:30184886|30185118 hsa-miR-3191-5p 0 1 0
chr6:30184886|30185118 hsa-miR-6861-3p 0 1 0
chr6:30184886|30185118 hsa-miR-6818-3p 0 1 0
chr6:30184886|30185118 hsa-miR-6830-5p 0 1 0
chr6:30184886|30185118 hsa-miR-6824-5p 1 0 0
chr6:30184886|30185118 hsa-miR-5584-5p 0 1 0
chr6:30184886|30185118 hsa-miR-3189-3p 0 1 0
chr6:30184886|30185118 hsa-miR-5571-3p 0 1 0
chr6:30184886|30185118 hsa-miR-483-5p 0 1 0
chr6:30184886|30185118 hsa-miR-3184-3p 0 1 0
chr6:30184886|30185118 hsa-miR-4717-5p 0 1 0
chr6:30184886|30185118 hsa-miR-6800-3p 0 1 0
chr6:30184886|30185118 hsa-miR-1207-5p 1 0 0
chr6:30184886|30185118 hsa-miR-1273h-5p 1 0 0
chr6:30184886|30185118 hsa-miR-4763-3p 1 0 0
chr6:30184886|30185118 hsa-miR-6812-5p 1 0 0
chr6:30184886|30185118 hsa-miR-6870-5p 1 0 0
chr6:30184886|30185118 hsa-miR-6769a-5p 1 0 0
chr6:30184886|30185118 hsa-miR-1249-5p 1 1 0
chr6:30184886|30185118 hsa-miR-6780a-5p 1 0 0
chr6:30184886|30185118 hsa-miR-6788-5p 0 1 0
chr6:30184886|30185118 hsa-miR-6797-5p 1 0 0
chr6:30184886|30185118 hsa-miR-6808-5p 1 0 0
chr6:30184886|30185118 hsa-miR-6879-5p 1 0 0
chr6:30184886|30185118 hsa-miR-4728-5p 1 1 0
chr6:30184886|30185118 hsa-miR-5196-5p 1 0 0
chr6:30184886|30185118 hsa-miR-6780b-5p 1 1 0
chr6:30184886|30185118 hsa-miR-1909-3p 1 0 0
chr6:30184886|30185118 hsa-miR-1238-5p 1 0 0
chr6:30184886|30185118 hsa-miR-10396a-3p 1 0 0
chr6:30184886|30185118 hsa-miR-6877-3p 0 1 0
chr6:30184886|30185118 hsa-miR-4646-5p 1 0 0
chr6:30184886|30185118 hsa-miR-6876-5p 0 1 0
chr6:30184886|30185118 hsa-miR-6819-3p 0 1 0
chr6:30184886|30185118 hsa-miR-6823-3p 0 1 0
chr6:30184886|30185118 hsa-miR-3619-5p 0 1 0
chr6:30184886|30185118 hsa-miR-6824-3p 1 1 0
chr6:30184886|30185118 hsa-miR-122b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:30184886|30185118
ORF Type ORF1
Protein Length 65
Nucleotide Length 198
Protein Sequence LVGLWPPAAFLSLSSHLHSLLGKWNLDAGRARDRGLTPCWGTRSELPRQERFCSTGCLSWCFWMC
Nucleotide Sequence CTGGTGGGCTTGTGGCCTCCTGCTGCCTTCCTTTCCCTGTCTTCCCATCTCCACTCTCTCCTAGGAAAGTGGAACCTGGATGCTGGTAGGGCCAGAGACAGAGGCTTAACACCCTGCTGGGGAACCCGGTCAGAACTCCCGAGGCAGGAGAGGTTCTGCTCCACTGGATGTTTGTCTTGGTGTTTTTGGATGTGCTGA

CircID chr6:30184886|30185118
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MLGNPVRTPEAGEVLLHWMFVLVFLDVLIKSKMFWILKTP
Nucleotide Sequence CTGCTGGGGAACCCGGTCAGAACTCCCGAGGCAGGAGAGGTTCTGCTCCACTGGATGTTTGTCTTGGTGTTTTTGGATGTGCTGATCAAGAGCAAGATGTTCTGGATTCTTAAAACTCCC

CircID chr6:30184886|30185118
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MSLALPASRFHFPRREWRWEDRERKAAGGHKPT
Nucleotide Sequence CTGTCTCTGGCCCTACCAGCATCCAGGTTCCACTTTCCTAGGAGAGAGTGGAGATGGGAAGACAGGGAAAGGAAGGCAGCAGGAGGCCACAAGCCCACC

CircID chr6:30184886|30185118
ORF Type ORF4
Protein Length 69
Nucleotide Length 207
Protein Sequence MLLISTSKNTKTNIQWSRTSPASGVLTGFPSRVLSLCLWPYQHPGSTFLGESGDGKTGKGRQQEATSPP
Nucleotide Sequence TTGCTCTTGATCAGCACATCCAAAAACACCAAGACAAACATCCAGTGGAGCAGAACCTCTCCTGCCTCGGGAGTTCTGACCGGGTTCCCCAGCAGGGTGTTAAGCCTCTGTCTCTGGCCCTACCAGCATCCAGGTTCCACTTTCCTAGGAGAGAGTGGAGATGGGAAGACAGGGAAAGGAAGGCAGCAGGAGGCCACAAGCCCACCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites