CircRNA Information

General Information
circRNA Basic Information
CircID chr6:30493735|30493914
Strand -
CircType exon
Host Gene ENSG00000204592.8;
Algorism CIRI2;
Sequence TAGAGTGATGCTAAGTGGAAATGTGAGGTGCAGCTGCCACAGAGGGCCCCCACCAGGGAAATGTCTAGTGTCTAGTGGATCCAGGCCACAGGAGAGAGTGCCTTGTGGAGCGCTGGGAGCAGGACCTGACCACCACCAGGACCCCAGAACTGTGGAGTCAGTGGCAGCATGCAGCGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:30493735|30493914 hsa-miR-23a-5p 0 0 1
chr6:30493735|30493914 hsa-miR-23a-3p 0 0 1
chr6:30493735|30493914 hsa-miR-23b-5p 0 0 1
chr6:30493735|30493914 hsa-miR-23b-3p 0 0 1
chr6:30493735|30493914 hsa-miR-370-5p 0 0 1
chr6:30493735|30493914 hsa-miR-370-3p 0 0 1
chr6:30493735|30493914 hsa-miR-345-5p 0 0 1
chr6:30493735|30493914 hsa-miR-345-3p 0 0 1
chr6:30493735|30493914 hsa-miR-506-5p 0 0 1
chr6:30493735|30493914 hsa-miR-506-3p 0 0 1
chr6:30493735|30493914 hsa-miR-637 1 0 1
chr6:30493735|30493914 hsa-miR-541-5p 0 0 1
chr6:30493735|30493914 hsa-miR-541-3p 0 0 1
chr6:30493735|30493914 hsa-miR-663b 0 0 1
chr6:30493735|30493914 hsa-miR-615-5p 1 1 1
chr6:30493735|30493914 hsa-miR-885-3p 0 0 1
chr6:30493735|30493914 hsa-miR-654-5p 0 0 1
chr6:30493735|30493914 hsa-miR-876-3p 0 0 1
chr6:30493735|30493914 hsa-miR-1274a 0 0 1
chr6:30493735|30493914 hsa-miR-323-5p 0 0 1
chr6:30493735|30493914 hsa-miR-124 0 0 1
chr6:30493735|30493914 hsa-miR-1254 0 0 1
chr6:30493735|30493914 hsa-miR-661 1 0 0
chr6:30493735|30493914 hsa-miR-1204 1 0 0
chr6:30493735|30493914 hsa-miR-3137 1 0 0
chr6:30493735|30493914 hsa-miR-4252 0 1 0
chr6:30493735|30493914 hsa-miR-4447 0 1 0
chr6:30493735|30493914 hsa-miR-4456 0 1 0
chr6:30493735|30493914 hsa-miR-4457 0 1 0
chr6:30493735|30493914 hsa-miR-9899 1 0 0
chr6:30493735|30493914 hsa-miR-92a-2-5p 0 1 0
chr6:30493735|30493914 hsa-miR-7155-5p 0 1 0
chr6:30493735|30493914 hsa-miR-323a-5p 0 1 0
chr6:30493735|30493914 hsa-miR-181a-2-3p 0 1 0
chr6:30493735|30493914 hsa-miR-6776-5p 1 0 0
chr6:30493735|30493914 hsa-miR-7156-3p 1 0 0
chr6:30493735|30493914 hsa-miR-660-3p 1 1 0
chr6:30493735|30493914 hsa-miR-4661-3p 1 1 0
chr6:30493735|30493914 hsa-miR-6804-3p 1 0 0
chr6:30493735|30493914 hsa-miR-2276-5p 0 1 0
chr6:30493735|30493914 hsa-miR-6770-3p 1 1 0
chr6:30493735|30493914 hsa-miR-4639-3p 0 1 0
chr6:30493735|30493914 hsa-miR-4704-5p 0 1 0
chr6:30493735|30493914 hsa-miR-4727-5p 0 1 0
chr6:30493735|30493914 hsa-miR-758-3p 1 0 0
chr6:30493735|30493914 hsa-miR-744-3p 0 1 0
chr6:30493735|30493914 hsa-miR-10400-5p 1 0 0
chr6:30493735|30493914 hsa-miR-6756-5p 1 0 0
chr6:30493735|30493914 hsa-miR-3116 0 1 0
chr6:30493735|30493914 hsa-miR-6814-3p 1 0 0
chr6:30493735|30493914 hsa-miR-6874-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr6:30493735|30493914
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence MLSGNVRCSCHRGPPPGKCLVSSGSRPQERVPCGALGAGPDHHQDPRTVESVAACSA
Nucleotide Sequence ATGCTAAGTGGAAATGTGAGGTGCAGCTGCCACAGAGGGCCCCCACCAGGGAAATGTCTAGTGTCTAGTGGATCCAGGCCACAGGAGAGAGTGCCTTGTGGAGCGCTGGGAGCAGGACCTGACCACCACCAGGACCCCAGAACTGTGGAGTCAGTGGCAGCATGCAGCGCC

CircID chr6:30493735|30493914
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MHAATDSTVLGSWWWSGPAPSAPQGTLSCGLDPLDTRHFPGGGPLWQLHLTFPLSITL
Nucleotide Sequence CTGCATGCTGCCACTGACTCCACAGTTCTGGGGTCCTGGTGGTGGTCAGGTCCTGCTCCCAGCGCTCCACAAGGCACTCTCTCCTGTGGCCTGGATCCACTAGACACTAGACATTTCCCTGGTGGGGGCCCTCTGTGGCAGCTGCACCTCACATTTCCACTTAGCATCACTCTA

CircID chr6:30493735|30493914
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MLPLTPQFWGPGGGQVLLPALHKALSPVAWIH
Nucleotide Sequence ATGCTGCCACTGACTCCACAGTTCTGGGGTCCTGGTGGTGGTCAGGTCCTGCTCCCAGCGCTCCACAAGGCACTCTCTCCTGTGGCCTGGATCCACTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites