CircRNA Information

General Information
circRNA Basic Information
CircID chr6:30546072|30546188
Strand -
CircType exon
Host Gene ENSG00000204590.11;
Algorism CIRI2;
Sequence TCAGCACTCATCCTCACCCAGCAGGGCATAAGGGTTTCGGCCAGCCAGGCTGGACCCTGGAGCCGAGGTTGGGGTCTCCTCATCCCCTTCTCCCTCCTCATCCGCATCCCGGTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:30546072|30546188 hsa-miR-370-5p 0 0 1
chr6:30546072|30546188 hsa-miR-370-3p 0 0 1
chr6:30546072|30546188 hsa-miR-874-5p 0 0 1
chr6:30546072|30546188 hsa-miR-874-3p 0 0 1
chr6:30546072|30546188 hsa-miR-1255a 0 0 1
chr6:30546072|30546188 hsa-miR-1262 0 0 1
chr6:30546072|30546188 hsa-miR-512-3p 0 0 1
chr6:30546072|30546188 hsa-miR-146b-3p 0 0 1
chr6:30546072|30546188 hsa-miR-1255b 0 0 1
chr6:30546072|30546188 hsa-miR-1185 0 0 1
chr6:30546072|30546188 hsa-miR-623 1 0 0
chr6:30546072|30546188 hsa-miR-658 1 0 0
chr6:30546072|30546188 hsa-miR-3141 1 0 0
chr6:30546072|30546188 hsa-miR-3154 0 1 0
chr6:30546072|30546188 hsa-miR-4259 1 0 0
chr6:30546072|30546188 hsa-miR-2392 1 0 0
chr6:30546072|30546188 hsa-miR-4510 0 1 0
chr6:30546072|30546188 hsa-miR-4516 0 1 0
chr6:30546072|30546188 hsa-miR-4651 1 0 0
chr6:30546072|30546188 hsa-miR-4686 1 0 0
chr6:30546072|30546188 hsa-miR-4689 1 0 0
chr6:30546072|30546188 hsa-miR-4710 0 1 0
chr6:30546072|30546188 hsa-miR-4739 1 0 0
chr6:30546072|30546188 hsa-miR-4751 0 1 0
chr6:30546072|30546188 hsa-miR-5787 1 0 0
chr6:30546072|30546188 hsa-miR-6090 1 0 0
chr6:30546072|30546188 hsa-miR-6127 1 0 0
chr6:30546072|30546188 hsa-miR-6129 0 1 0
chr6:30546072|30546188 hsa-miR-6133 1 0 0
chr6:30546072|30546188 hsa-miR-8077 1 0 0
chr6:30546072|30546188 hsa-miR-8085 1 0 0
chr6:30546072|30546188 hsa-miR-4433b-3p 1 0 0
chr6:30546072|30546188 hsa-miR-6734-5p 1 0 0
chr6:30546072|30546188 hsa-miR-4731-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6765-5p 1 0 0
chr6:30546072|30546188 hsa-miR-7106-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6825-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6720-5p 0 1 0
chr6:30546072|30546188 hsa-miR-6728-5p 1 0 0
chr6:30546072|30546188 hsa-miR-3692-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6833-5p 1 0 0
chr6:30546072|30546188 hsa-miR-5187-5p 1 0 0
chr6:30546072|30546188 hsa-miR-7847-3p 1 0 0
chr6:30546072|30546188 hsa-miR-4695-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6744-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6746-5p 1 0 0
chr6:30546072|30546188 hsa-miR-5589-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6849-3p 0 1 0
chr6:30546072|30546188 hsa-miR-6742-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6796-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6798-5p 1 0 0
chr6:30546072|30546188 hsa-miR-1224-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6760-5p 1 0 0
chr6:30546072|30546188 hsa-miR-7855-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6850-5p 1 0 0
chr6:30546072|30546188 hsa-miR-7109-5p 1 0 0
chr6:30546072|30546188 hsa-miR-1229-5p 1 0 0
chr6:30546072|30546188 hsa-miR-3691-5p 1 0 0
chr6:30546072|30546188 hsa-miR-4764-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6771-5p 1 0 0
chr6:30546072|30546188 hsa-miR-92b-5p 1 0 0
chr6:30546072|30546188 hsa-miR-149-3p 1 0 0
chr6:30546072|30546188 hsa-miR-4638-5p 0 1 0
chr6:30546072|30546188 hsa-miR-6793-3p 0 1 0
chr6:30546072|30546188 hsa-miR-500a-5p 1 0 0
chr6:30546072|30546188 hsa-miR-532-5p 1 0 0
chr6:30546072|30546188 hsa-miR-502-5p 1 0 0
chr6:30546072|30546188 hsa-miR-188-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6503-3p 1 0 0
chr6:30546072|30546188 hsa-miR-1207-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6769b-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6816-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6870-5p 1 0 0
chr6:30546072|30546188 hsa-miR-1343-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6737-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6752-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6756-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6803-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6819-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6851-5p 1 0 0
chr6:30546072|30546188 hsa-miR-11181-3p 1 0 0
chr6:30546072|30546188 hsa-miR-1249-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6751-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6763-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6779-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6780a-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6797-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6879-5p 1 0 0
chr6:30546072|30546188 hsa-miR-7111-5p 1 0 0
chr6:30546072|30546188 hsa-miR-4728-5p 1 0 0
chr6:30546072|30546188 hsa-miR-5196-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6780b-5p 1 0 0
chr6:30546072|30546188 hsa-miR-4649-5p 1 0 0
chr6:30546072|30546188 hsa-miR-4701-3p 0 1 0
chr6:30546072|30546188 hsa-miR-4745-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6729-5p 1 0 0
chr6:30546072|30546188 hsa-miR-675-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6794-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6795-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6858-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6883-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6887-5p 1 0 0
chr6:30546072|30546188 hsa-miR-4769-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6799-3p 1 0 0
chr6:30546072|30546188 hsa-miR-6736-5p 0 1 0
chr6:30546072|30546188 hsa-miR-4646-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6891-5p 1 0 0
chr6:30546072|30546188 hsa-miR-4716-3p 1 0 0
chr6:30546072|30546188 hsa-miR-6785-5p 1 0 0
chr6:30546072|30546188 hsa-miR-4667-5p 1 0 0
chr6:30546072|30546188 hsa-miR-6504-5p 0 1 0
chr6:30546072|30546188 hsa-miR-1255b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:30546072|30546188
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MRMRREKGMRRPQPRLQGPAWLAETLMPCWVRMSA
Nucleotide Sequence ATGCGGATGAGGAGGGAGAAGGGGATGAGGAGACCCCAACCTCGGCTCCAGGGTCCAGCCTGGCTGGCCGAAACCCTTATGCCCTGCTGGGTGAGGATGAGTGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab