CircNet

General Information

circRNA Basic Information

CircID	chr6:30555074\|30555674
Strand	-
CircType	Non-Repeat
Host Gene	ENSG00000204590.12;
Algorism	CIRI2;DCC;
Sequence	CCGGGAGCGGCGAGAGGAACAGACCGACACCTCGGACGGGGAGTCTGTGACCCATCATATCCGCAGGCTTAACCAGCAGCCTTCTCAGGGGCTGGGTCCACGAGGCTACGACCCAAATCGATACCGACTGCATTTTGAGAGAGACAGCAGGGAGGAGGTAGAGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGGAGCTGGACATCCGGGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:30555074\|30555674
ORF Type	ORF1
Protein Length	44
Nucleotide Length	132
Protein Sequence	MQSVSIWVVASWTQPLRRLLVKPADMMGHRLPVRGVGLFLSPLP
Nucleotide Sequence	ATGCAGTCGGTATCGATTTGGGTCGTAGCCTCGTGGACCCAGCCCCTGAGAAGGCTGCTGGTTAAGCCTGCGGATATGATGGGTCACAGACTCCCCGTCCGAGGTGTCGGTCTGTTCCTCTCGCCGCTCCCG

CircID	chr6:30555074\|30555674
ORF Type	ORF2
Protein Length	42
Nucleotide Length	126
Protein Sequence	MSSSNNSALTGCRTCSRAALFLLSTSSLLSLSKCSRYRFGS*
Nucleotide Sequence	ATGTCCAGCTCCAACAACTCAGCACTGACCGGCTGTAGAACTTGCTCCCGGGCTGCTCTCTTTCTCCTCTCTACCTCCTCCCTGCTGTCTCTCTCAAAATGCAGTCGGTATCGATTTGGGTCGTAG

CircID	chr6:30555074\|30555674
ORF Type	ORF3
Protein Length	64
Nucleotide Length	192
Protein Sequence	VTHHIRRLNQQPSQGLGPRGYDPNRYRLHFERDSREEVERRKRAAREQVLQPVSAELLELDIRE
Nucleotide Sequence	GTGACCCATCATATCCGCAGGCTTAACCAGCAGCCTTCTCAGGGGCTGGGTCCACGAGGCTACGACCCAAATCGATACCGACTGCATTTTGAGAGAGACAGCAGGGAGGAGGTAGAGAGGAGAAAGAGAGCAGCCCGGGAGCAAGTTCTACAGCCGGTCAGTGCTGAGTTGTTGGAGCTGGACATCCGGGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:30555074\|30555674	MSI2	4	0	0
chr6:30555074\|30555674	NOP56	1	1	0
chr6:30555074\|30555674	ELAVL1	4	3	3
chr6:30555074\|30555674	NUMA1	3	0	0
chr6:30555074\|30555674	SF3B4	6	2	0
chr6:30555074\|30555674	FAM120A	6	3	1
chr6:30555074\|30555674	PRPF8	11	9	1
chr6:30555074\|30555674	UPF1	1	0	0
chr6:30555074\|30555674	TNRC6A	1	2	1
chr6:30555074\|30555674	FMR1	14	15	6
chr6:30555074\|30555674	CPSF6	3	4	1
chr6:30555074\|30555674	TIA1	2	0	0
chr6:30555074\|30555674	TROVE2	1	0	1
chr6:30555074\|30555674	FUS	2	1	0
chr6:30555074\|30555674	DGCR8	3	1	1
chr6:30555074\|30555674	SRSF7	4	0	1
chr6:30555074\|30555674	SRSF1	11	9	6
chr6:30555074\|30555674	NOP58	3	2	2
chr6:30555074\|30555674	SRSF3	0	1	0
chr6:30555074\|30555674	NONO	0	0	1
chr6:30555074\|30555674	ADAR	1	0	0
chr6:30555074\|30555674	U2AF2	1	7	2
chr6:30555074\|30555674	SRSF9	4	3	3
chr6:30555074\|30555674	HNRNPU	0	0	1
chr6:30555074\|30555674	LSM11	1	1	0
chr6:30555074\|30555674	HNRNPK	5	0	0
chr6:30555074\|30555674	PCBP2	3	0	0
chr6:30555074\|30555674	HNRNPM	0	1	1
chr6:30555074\|30555674	SF3A3	2	1	0
chr6:30555074\|30555674	PTBP1	3	4	1
chr6:30555074\|30555674	HNRNPC	1	2	0
chr6:30555074\|30555674	TRA2A	10	1	1
chr6:30555074\|30555674	HNRNPA2B1	4	4	1
chr6:30555074\|30555674	ZNF184	4	2	0
chr6:30555074\|30555674	ACIN1	0	1	0
chr6:30555074\|30555674	DDX3X	3	3	0
chr6:30555074\|30555674	LARP7	0	0	1
chr6:30555074\|30555674	SMNDC1	3	2	2
chr6:30555074\|30555674	AUH	0	2	1
chr6:30555074\|30555674	HNRNPA1	4	0	3
chr6:30555074\|30555674	RANGAP1	7	3	2
chr6:30555074\|30555674	LIN28A	0	2	0
chr6:30555074\|30555674	LIN28B	3	5	4
chr6:30555074\|30555674	FXR1	2	7	2
chr6:30555074\|30555674	FXR2	5	4	2
chr6:30555074\|30555674	SND1	7	5	3
chr6:30555074\|30555674	IGF2BP1	6	1	1
chr6:30555074\|30555674	GTF2F1	12	1	0
chr6:30555074\|30555674	IGF2BP3	5	2	2
chr6:30555074\|30555674	IGF2BP2	6	7	2
chr6:30555074\|30555674	NPM1	0	0	2
chr6:30555074\|30555674	HNRNPUL1	1	0	0
chr6:30555074\|30555674	TARDBP	1	0	0
chr6:30555074\|30555674	TAF15	4	2	0
chr6:30555074\|30555674	AIFM1	3	0	0
chr6:30555074\|30555674	BUD13	4	5	0
chr6:30555074\|30555674	RBFOX2	12	4	1
chr6:30555074\|30555674	SLTM	5	1	3
chr6:30555074\|30555674	EIF4G2	4	0	0
chr6:30555074\|30555674	DDX42	1	0	1
chr6:30555074\|30555674	CSTF2T	11	1	0
chr6:30555074\|30555674	BCCIP	9	1	0
chr6:30555074\|30555674	YWHAG	1	0	0
chr6:30555074\|30555674	U2AF1	4	4	1
chr6:30555074\|30555674	RNF219	1	0	1
chr6:30555074\|30555674	ILF3	2	0	0
chr6:30555074\|30555674	DKC1	2	0	0
chr6:30555074\|30555674	FBL	7	3	3
chr6:30555074\|30555674	AGO1	1	2	0
chr6:30555074\|30555674	EWSR1	0	0	2
chr6:30555074\|30555674	EIF4A3	6	7	5
chr6:30555074\|30555674	AGO2	1	3	1

CircRNA Information