CircRNA Information

General Information
circRNA Basic Information
CircID chr6:30586239|30586673
Strand +
CircType exon
Host Gene ENSG00000204574.11;
Algorism CIRI2;
Sequence TCTTCCCCACACCATTAGGGCCCACAATGCAAATCCTTGAATCCATGTCGATGCCAAAATCCAAGTTCTTAAAGAGTGGTTTCTGTCCCTGGTAGCCGAATGTCACACCTGAAAGCCACGAAAAGAAGCAATTTATATTCTTTTCAGTCCCTGCAAAGTCCCTCTCATGTGCTGGCCTTGGAGAACAGGAGCAATCTCAGCCTTGGTGGAGAATTTAGGGTGCACATACATGCTTCCGGTGCTTCCTGTGGAGCAGCAGAGGCCCGCGGCACTCACCATGCAGACCCAGCACTGGAGGGCTGAGTGGTGGGGGGTCTGGAAAAGTGAAGCGCACAGTGTACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:30586239|30586673 hsa-miR-33a-5p 0 0 1
chr6:30586239|30586673 hsa-miR-33a-3p 0 0 1
chr6:30586239|30586673 hsa-miR-96-5p 0 0 1
chr6:30586239|30586673 hsa-miR-96-3p 0 0 1
chr6:30586239|30586673 hsa-miR-182-5p 0 0 1
chr6:30586239|30586673 hsa-miR-182-3p 0 0 1
chr6:30586239|30586673 hsa-miR-186-5p 0 0 1
chr6:30586239|30586673 hsa-miR-186-3p 0 0 1
chr6:30586239|30586673 hsa-miR-567 0 0 1
chr6:30586239|30586673 hsa-miR-33b-5p 0 0 1
chr6:30586239|30586673 hsa-miR-33b-3p 0 0 1
chr6:30586239|30586673 hsa-miR-1271-5p 0 0 1
chr6:30586239|30586673 hsa-miR-1271-3p 0 0 1
chr6:30586239|30586673 hsa-miR-890 0 0 1
chr6:30586239|30586673 hsa-miR-933 0 0 1
chr6:30586239|30586673 hsa-miR-297 0 0 1
chr6:30586239|30586673 hsa-miR-1204 0 0 1
chr6:30586239|30586673 hsa-miR-1290 0 0 1
chr6:30586239|30586673 hsa-miR-1246 0 0 1
chr6:30586239|30586673 hsa-miR-302f 0 0 1
chr6:30586239|30586673 hsa-miR-1825 0 0 1
chr6:30586239|30586673 hsa-miR-512-5p 0 0 1
chr6:30586239|30586673 hsa-miR-125a-3p 0 0 1
chr6:30586239|30586673 hsa-miR-296-5p 0 0 1
chr6:30586239|30586673 hsa-miR-512-3p 0 0 1
chr6:30586239|30586673 hsa-miR-491-5p 0 0 1
chr6:30586239|30586673 hsa-miR-193a-5p 1 0 1
chr6:30586239|30586673 hsa-miR-199a-5p 0 0 1
chr6:30586239|30586673 hsa-miR-525-5p 0 0 1
chr6:30586239|30586673 hsa-miR-490-5p 0 0 1
chr6:30586239|30586673 hsa-miR-455-5p 0 0 1
chr6:30586239|30586673 hsa-miR-199b-5p 0 0 1
chr6:30586239|30586673 hsa-miR-520a-5p 0 0 1
chr6:30586239|30586673 hsa-miR-876-5p 0 0 1
chr6:30586239|30586673 hsa-miR-515-5p 0 0 1
chr6:30586239|30586673 hsa-miR-542-3p 0 0 1
chr6:30586239|30586673 hsa-miR-548b-3p 0 0 1
chr6:30586239|30586673 hsa-miR-371-3p 0 0 1
chr6:30586239|30586673 hsa-miR-557 1 0 0
chr6:30586239|30586673 hsa-miR-3131 1 0 0
chr6:30586239|30586673 hsa-miR-3135a 1 0 0
chr6:30586239|30586673 hsa-miR-4322 1 0 0
chr6:30586239|30586673 hsa-miR-3909 1 0 0
chr6:30586239|30586673 hsa-miR-3918 1 0 0
chr6:30586239|30586673 hsa-miR-3689e 1 0 0
chr6:30586239|30586673 hsa-miR-3689f 1 0 0
chr6:30586239|30586673 hsa-miR-4642 1 0 0
chr6:30586239|30586673 hsa-miR-4688 1 0 0
chr6:30586239|30586673 hsa-miR-6132 1 0 0
chr6:30586239|30586673 hsa-miR-6863 1 0 0
chr6:30586239|30586673 hsa-miR-11399 1 0 0
chr6:30586239|30586673 hsa-miR-211-3p 1 0 0
chr6:30586239|30586673 hsa-miR-6747-5p 1 0 0
chr6:30586239|30586673 hsa-miR-4433a-3p 1 0 0
chr6:30586239|30586673 hsa-miR-6720-5p 1 0 0
chr6:30586239|30586673 hsa-miR-1236-5p 1 0 0
chr6:30586239|30586673 hsa-miR-3934-5p 1 0 0
chr6:30586239|30586673 hsa-miR-4653-3p 1 0 0
chr6:30586239|30586673 hsa-miR-7845-5p 1 0 0
chr6:30586239|30586673 hsa-miR-659-3p 1 0 0
chr6:30586239|30586673 hsa-miR-3194-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6821-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6772-3p 1 0 0
chr6:30586239|30586673 hsa-miR-4640-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6753-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6757-3p 1 0 0
chr6:30586239|30586673 hsa-miR-4787-5p 1 0 0
chr6:30586239|30586673 hsa-miR-149-3p 1 0 0
chr6:30586239|30586673 hsa-miR-6895-5p 1 0 0
chr6:30586239|30586673 hsa-miR-3180-5p 1 0 0
chr6:30586239|30586673 hsa-miR-106b-3p 1 0 0
chr6:30586239|30586673 hsa-miR-1298-5p 1 0 0
chr6:30586239|30586673 hsa-miR-541-5p 1 0 0
chr6:30586239|30586673 hsa-miR-1207-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6743-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6813-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6779-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6797-5p 1 0 0
chr6:30586239|30586673 hsa-miR-1915-3p 1 0 0
chr6:30586239|30586673 hsa-miR-4685-5p 1 0 0
chr6:30586239|30586673 hsa-miR-4726-5p 1 0 0
chr6:30586239|30586673 hsa-miR-4749-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6735-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6794-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6858-5p 1 0 0
chr6:30586239|30586673 hsa-miR-4758-5p 1 0 0
chr6:30586239|30586673 hsa-miR-365a-5p 1 0 0
chr6:30586239|30586673 hsa-miR-365b-5p 1 0 0
chr6:30586239|30586673 hsa-miR-5008-3p 1 0 0
chr6:30586239|30586673 hsa-miR-6724-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6837-5p 1 0 0
chr6:30586239|30586673 hsa-miR-6511b-3p 1 0 0
chr6:30586239|30586673 hsa-miR-4691-5p 1 0 0
chr6:30586239|30586673 hsa-miR-4690-3p 1 0 0
chr6:30586239|30586673 hsa-miR-6737-3p 1 0 0
chr6:30586239|30586673 hsa-miR-3689a-5p 1 0 0
chr6:30586239|30586673 hsa-miR-3689b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:30586239|30586673
ORF Type ORF1
Protein Length 67
Nucleotide Length 204
Protein Sequence MSHLKATKRSNLYSFQSLQSPSHVLALENRSNLSLGGEFRVHIHASGASCGAAEARGTHHADPALEG
Nucleotide Sequence ATGTCACACCTGAAAGCCACGAAAAGAAGCAATTTATATTCTTTTCAGTCCCTGCAAAGTCCCTCTCATGTGCTGGCCTTGGAGAACAGGAGCAATCTCAGCCTTGGTGGAGAATTTAGGGTGCACATACATGCTTCCGGTGCTTCCTGTGGAGCAGCAGAGGCCCGCGGCACTCACCATGCAGACCCAGCACTGGAGGGCTGA
CircID chr6:30586239|30586673
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence MCWPWRTGAISALVENLGCTYMLPVLPVEQQRPAALTMQTQHWRAEWWGVWKSEAHSVL
Nucleotide Sequence ATGTGCTGGCCTTGGAGAACAGGAGCAATCTCAGCCTTGGTGGAGAATTTAGGGTGCACATACATGCTTCCGGTGCTTCCTGTGGAGCAGCAGAGGCCCGCGGCACTCACCATGCAGACCCAGCACTGGAGGGCTGAGTGGTGGGGGGTCTGGAAAAGTGAAGCGCACAGTGTACTC
CircID chr6:30586239|30586673
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MWSSRGPRHSPCRPSTGGLSGGGSGKVKRTVY
Nucleotide Sequence CTGTGGAGCAGCAGAGGCCCGCGGCACTCACCATGCAGACCCAGCACTGGAGGGCTGAGTGGTGGGGGGTCTGGAAAAGTGAAGCGCACAGTGTAC
CircID chr6:30586239|30586673
ORF Type ORF4
Protein Length 67
Nucleotide Length 204
Protein Sequence MCASLFQTPHHSALQCWVCMVSAAGLCCSTGSTGSMYVHPKFSTKAEIAPVLQGQHMRGTLQGLKRI
Nucleotide Sequence CTGTGCGCTTCACTTTTCCAGACCCCCCACCACTCAGCCCTCCAGTGCTGGGTCTGCATGGTGAGTGCCGCGGGCCTCTGCTGCTCCACAGGAAGCACCGGAAGCATGTATGTGCACCCTAAATTCTCCACCAAGGCTGAGATTGCTCCTGTTCTCCAAGGCCAGCACATGAGAGGGACTTTGCAGGGACTGAAAAGAATATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab