CircRNA Information

General Information
circRNA Basic Information
CircID chr6:30684553|30684702
Strand +
CircType exon
Host Gene ENSG00000146112.10;
Algorism CIRI2;
Sequence TGCCCCCCAACCTCCTGGGGATCCCCTCATGAGCCGCCTGTTCTATGGGGTGAAGGCAGGGCCAGGGGTGGGGGCCCCCCGCCGCAGTGGACACACCTTCACCGTCAACCCCCGGCGGTCTGTGCCCCCTGCGACCCCAGCCACCCCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:30684553|30684702 hsa-miR-328-5p 0 0 1
chr6:30684553|30684702 hsa-miR-328-3p 0 0 1
chr6:30684553|30684702 hsa-miR-412-5p 0 0 1
chr6:30684553|30684702 hsa-miR-412-3p 0 0 1
chr6:30684553|30684702 hsa-miR-493-5p 0 0 1
chr6:30684553|30684702 hsa-miR-493-3p 0 0 1
chr6:30684553|30684702 hsa-miR-563 0 0 1
chr6:30684553|30684702 hsa-miR-608 1 1 1
chr6:30684553|30684702 hsa-miR-665 0 1 1
chr6:30684553|30684702 hsa-miR-1291 0 1 1
chr6:30684553|30684702 hsa-miR-1275 0 0 1
chr6:30684553|30684702 hsa-miR-296-5p 0 1 1
chr6:30684553|30684702 hsa-miR-615-5p 0 1 1
chr6:30684553|30684702 hsa-miR-423-5p 0 0 1
chr6:30684553|30684702 hsa-miR-331-3p 0 1 1
chr6:30684553|30684702 hsa-miR-342-5p 0 0 1
chr6:30684553|30684702 hsa-miR-663 0 0 1
chr6:30684553|30684702 hsa-miR-638 1 0 0
chr6:30684553|30684702 hsa-miR-663a 0 1 0
chr6:30684553|30684702 hsa-miR-762 1 0 0
chr6:30684553|30684702 hsa-miR-4286 0 1 0
chr6:30684553|30684702 hsa-miR-3650 0 1 0
chr6:30684553|30684702 hsa-miR-3937 0 1 0
chr6:30684553|30684702 hsa-miR-4651 1 1 0
chr6:30684553|30684702 hsa-miR-5572 1 1 0
chr6:30684553|30684702 hsa-miR-5787 1 1 0
chr6:30684553|30684702 hsa-miR-6086 0 1 0
chr6:30684553|30684702 hsa-miR-8072 0 1 0
chr6:30684553|30684702 hsa-miR-150-3p 1 0 0
chr6:30684553|30684702 hsa-miR-6734-5p 0 1 0
chr6:30684553|30684702 hsa-miR-6840-3p 0 1 0
chr6:30684553|30684702 hsa-miR-7155-5p 0 1 0
chr6:30684553|30684702 hsa-miR-6747-3p 0 1 0
chr6:30684553|30684702 hsa-miR-149-5p 1 1 0
chr6:30684553|30684702 hsa-miR-3150a-3p 1 0 0
chr6:30684553|30684702 hsa-miR-8069 1 0 0
chr6:30684553|30684702 hsa-miR-6798-5p 0 1 0
chr6:30684553|30684702 hsa-miR-6782-5p 1 0 0
chr6:30684553|30684702 hsa-miR-887-3p 1 0 0
chr6:30684553|30684702 hsa-miR-4787-5p 1 1 0
chr6:30684553|30684702 hsa-miR-3173-5p 0 1 0
chr6:30684553|30684702 hsa-miR-6779-3p 0 1 0
chr6:30684553|30684702 hsa-miR-6847-3p 0 1 0
chr6:30684553|30684702 hsa-miR-4763-3p 1 0 0
chr6:30684553|30684702 hsa-miR-6812-5p 0 1 0
chr6:30684553|30684702 hsa-miR-6737-5p 0 1 0
chr6:30684553|30684702 hsa-miR-6752-5p 1 0 0
chr6:30684553|30684702 hsa-miR-6756-5p 1 0 0
chr6:30684553|30684702 hsa-miR-6803-5p 1 0 0
chr6:30684553|30684702 hsa-miR-6722-3p 1 0 0
chr6:30684553|30684702 hsa-miR-6885-5p 0 1 0
chr6:30684553|30684702 hsa-miR-6799-3p 0 1 0
chr6:30684553|30684702 hsa-miR-6855-5p 1 1 0
chr6:30684553|30684702 hsa-miR-769-3p 0 1 0
chr6:30684553|30684702 hsa-miR-6775-3p 1 1 0
chr6:30684553|30684702 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:30684553|30684702
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MSRLFYGVKAGPGVGAPRRSGHTFTVNPRRSVPPATPATP
Nucleotide Sequence ATGAGCCGCCTGTTCTATGGGGTGAAGGCAGGGCCAGGGGTGGGGGCCCCCCGCCGCAGTGGACACACCTTCACCGTCAACCCCCGGCGGTCTGTGCCCCCTGCGACCCCAGCCACCCCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites