CircRNA Information

General Information
circRNA Basic Information
CircID chr6:30899377|30899572
Strand -
CircType exon
Host Gene ENSG00000204580.10;
Algorism CIRI2;
Sequence CTCTGCCCTTCCCCTCCCGACAGCCCATCACCTCTAATAGAGGCAGTGAGACTGCAGGTGGGCTGGGCCCACCCAGGGAGCTGATGCCCCTTCTCCCCTTCCTGGACACACTCTCATGTCCCCTTCCTGTTCTTCCTTCCTAGAAGCCCCTGTCGCCCACCCAGCTGGTCCTGTGGATGGGATCCTCTCCACCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:30899377|30899572 hsa-miR-198 1 0 1
chr6:30899377|30899572 hsa-miR-185-5p 0 0 1
chr6:30899377|30899572 hsa-miR-185-3p 0 0 1
chr6:30899377|30899572 hsa-miR-541-5p 0 0 1
chr6:30899377|30899572 hsa-miR-541-3p 0 0 1
chr6:30899377|30899572 hsa-miR-877-5p 0 0 1
chr6:30899377|30899572 hsa-miR-877-3p 0 0 1
chr6:30899377|30899572 hsa-miR-665 1 0 1
chr6:30899377|30899572 hsa-miR-1293 0 0 1
chr6:30899377|30899572 hsa-miR-1252-5p 0 0 1
chr6:30899377|30899572 hsa-miR-1252-3p 0 0 1
chr6:30899377|30899572 hsa-miR-296-5p 0 0 1
chr6:30899377|30899572 hsa-miR-574-5p 0 0 1
chr6:30899377|30899572 hsa-miR-654-5p 1 0 1
chr6:30899377|30899572 hsa-miR-1224-3p 0 0 1
chr6:30899377|30899572 hsa-miR-1207-3p 0 0 1
chr6:30899377|30899572 hsa-miR-1273 0 0 1
chr6:30899377|30899572 hsa-miR-601 1 0 0
chr6:30899377|30899572 hsa-miR-638 1 0 0
chr6:30899377|30899572 hsa-miR-762 1 0 0
chr6:30899377|30899572 hsa-miR-1182 1 0 0
chr6:30899377|30899572 hsa-miR-1202 1 0 0
chr6:30899377|30899572 hsa-miR-3141 1 0 0
chr6:30899377|30899572 hsa-miR-3154 1 0 0
chr6:30899377|30899572 hsa-miR-3196 1 0 0
chr6:30899377|30899572 hsa-miR-4314 1 0 0
chr6:30899377|30899572 hsa-miR-4259 1 0 0
chr6:30899377|30899572 hsa-miR-4253 1 0 0
chr6:30899377|30899572 hsa-miR-4267 1 0 0
chr6:30899377|30899572 hsa-miR-4270 1 0 0
chr6:30899377|30899572 hsa-miR-3659 1 0 0
chr6:30899377|30899572 hsa-miR-3918 1 0 0
chr6:30899377|30899572 hsa-miR-4450 1 0 0
chr6:30899377|30899572 hsa-miR-4476 1 0 0
chr6:30899377|30899572 hsa-miR-4486 1 0 0
chr6:30899377|30899572 hsa-miR-4489 1 0 0
chr6:30899377|30899572 hsa-miR-4505 1 0 0
chr6:30899377|30899572 hsa-miR-2392 1 0 0
chr6:30899377|30899572 hsa-miR-4507 1 0 0
chr6:30899377|30899572 hsa-miR-4533 1 0 0
chr6:30899377|30899572 hsa-miR-1587 1 0 0
chr6:30899377|30899572 hsa-miR-4651 1 0 0
chr6:30899377|30899572 hsa-miR-4656 1 0 0
chr6:30899377|30899572 hsa-miR-4658 1 0 0
chr6:30899377|30899572 hsa-miR-4669 1 0 0
chr6:30899377|30899572 hsa-miR-4688 1 0 0
chr6:30899377|30899572 hsa-miR-4706 1 0 0
chr6:30899377|30899572 hsa-miR-4739 1 0 0
chr6:30899377|30899572 hsa-miR-4741 1 0 0
chr6:30899377|30899572 hsa-miR-5093 1 0 0
chr6:30899377|30899572 hsa-miR-5192 1 0 0
chr6:30899377|30899572 hsa-miR-5194 1 0 0
chr6:30899377|30899572 hsa-miR-5787 1 0 0
chr6:30899377|30899572 hsa-miR-6085 1 0 0
chr6:30899377|30899572 hsa-miR-6124 1 0 0
chr6:30899377|30899572 hsa-miR-6133 1 0 0
chr6:30899377|30899572 hsa-miR-6165 1 0 0
chr6:30899377|30899572 hsa-miR-6745 1 0 0
chr6:30899377|30899572 hsa-miR-8052 1 0 0
chr6:30899377|30899572 hsa-miR-12118 1 0 0
chr6:30899377|30899572 hsa-miR-211-3p 1 0 0
chr6:30899377|30899572 hsa-miR-4433b-3p 1 0 0
chr6:30899377|30899572 hsa-miR-6734-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4433a-3p 1 0 0
chr6:30899377|30899572 hsa-miR-6861-5p 1 0 0
chr6:30899377|30899572 hsa-miR-7106-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6825-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6894-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4687-3p 1 0 0
chr6:30899377|30899572 hsa-miR-6799-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6510-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6728-5p 1 0 0
chr6:30899377|30899572 hsa-miR-8071 1 0 0
chr6:30899377|30899572 hsa-miR-1236-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6757-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6867-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6746-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6820-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6721-5p 1 0 0
chr6:30899377|30899572 hsa-miR-197-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6776-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6742-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6716-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6768-5p 1 0 0
chr6:30899377|30899572 hsa-miR-3180-3p 1 0 0
chr6:30899377|30899572 hsa-miR-6748-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6793-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6829-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6805-5p 1 0 0
chr6:30899377|30899572 hsa-miR-23a-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6798-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6760-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6782-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6810-5p 1 0 0
chr6:30899377|30899572 hsa-miR-5006-5p 1 0 0
chr6:30899377|30899572 hsa-miR-204-3p 1 0 0
chr6:30899377|30899572 hsa-miR-1229-5p 1 0 0
chr6:30899377|30899572 hsa-miR-193b-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6784-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4640-5p 1 0 0
chr6:30899377|30899572 hsa-miR-1228-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6771-5p 1 0 0
chr6:30899377|30899572 hsa-miR-92b-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4732-5p 1 0 0
chr6:30899377|30899572 hsa-miR-3202 1 0 0
chr6:30899377|30899572 hsa-miR-149-3p 1 0 0
chr6:30899377|30899572 hsa-miR-6830-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6507-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6824-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6789-5p 1 0 0
chr6:30899377|30899572 hsa-miR-3162-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6800-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6802-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6886-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4776-5p 1 0 0
chr6:30899377|30899572 hsa-miR-3191-3p 1 0 0
chr6:30899377|30899572 hsa-miR-1207-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4763-3p 1 0 0
chr6:30899377|30899572 hsa-miR-6769b-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6787-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6812-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6870-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6775-5p 1 0 0
chr6:30899377|30899572 hsa-miR-1343-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6737-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6743-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6752-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6754-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6756-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6769a-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6813-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6819-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6851-5p 1 0 0
chr6:30899377|30899572 hsa-miR-11181-3p 1 0 0
chr6:30899377|30899572 hsa-miR-1249-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6722-3p 1 0 0
chr6:30899377|30899572 hsa-miR-6779-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6780a-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6797-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6808-5p 1 0 0
chr6:30899377|30899572 hsa-miR-7111-5p 1 0 0
chr6:30899377|30899572 hsa-miR-3620-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4728-5p 1 0 0
chr6:30899377|30899572 hsa-miR-5196-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6780b-5p 1 0 0
chr6:30899377|30899572 hsa-miR-1909-3p 1 0 0
chr6:30899377|30899572 hsa-miR-328-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4649-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4701-3p 1 0 0
chr6:30899377|30899572 hsa-miR-4725-3p 1 0 0
chr6:30899377|30899572 hsa-miR-4726-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4745-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4749-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6729-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6735-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6738-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6794-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6846-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6848-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6858-5p 1 0 0
chr6:30899377|30899572 hsa-miR-939-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4758-5p 1 0 0
chr6:30899377|30899572 hsa-miR-3940-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6758-5p 1 0 0
chr6:30899377|30899572 hsa-miR-7843-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6736-5p 1 0 0
chr6:30899377|30899572 hsa-miR-3679-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4646-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4747-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6876-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6891-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6766-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6785-5p 1 0 0
chr6:30899377|30899572 hsa-miR-3184-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6790-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6849-5p 1 0 0
chr6:30899377|30899572 hsa-miR-6837-5p 1 0 0
chr6:30899377|30899572 hsa-miR-4756-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:30899377|30899572
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MSPSCSSFLEAPVAHPAGPVDGILSTL
Nucleotide Sequence ATGTCCCCTTCCTGTTCTTCCTTCCTAGAAGCCCCTGTCGCCCACCCAGCTGGTCCTGTGGATGGGATCCTCTCCACCCTC
CircID chr6:30899377|30899572
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence LPFPSRQPITSNRGSETAGGLGPPRELMPLLPFLDTLSCPLPVLPS
Nucleotide Sequence CTGCCCTTCCCCTCCCGACAGCCCATCACCTCTAATAGAGGCAGTGAGACTGCAGGTGGGCTGGGCCCACCCAGGGAGCTGATGCCCCTTCTCCCCTTCCTGGACACACTCTCATGTCCCCTTCCTGTTCTTCCTTCCTAG
CircID chr6:30899377|30899572
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MGGPSPPAVSLPLLEVMGCREGKGR
Nucleotide Sequence CTGGGTGGGCCCAGCCCACCTGCAGTCTCACTGCCTCTATTAGAGGTGATGGGCTGTCGGGAGGGGAAGGGCAGA
CircID chr6:30899377|30899572
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MRVCPGRGEGASAPWVGPAHLQSHCLY
Nucleotide Sequence ATGAGAGTGTGTCCAGGAAGGGGAGAAGGGGCATCAGCTCCCTGGGTGGGCCCAGCCCACCTGCAGTCTCACTGCCTCTATTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab