CircRNA Information

General Information
circRNA Basic Information
CircID chr6:30899676|30899987
Strand +
CircType exon
Host Gene ENSG00000204580.10;
Algorism CIRI2;
Sequence CCCAAGGCTATGGGCCGTTGCTCCCTCTTTCCCCCCAATCCCAATATTTACTCCACAGAAACGTATAGGCTTAGAGAAGTTCTAGCTACAAGACTGCAAGTGGGAAGTGGGGGTGACTGAGGGCTGGGGCGGGGCTACCCCCAGGTCCAGTGTTTCAGGTGATGGAGGAGGAAGAAGCCCAAGCTGAGGACAAGTACAGGAGCAGGCACAAGGAAACATTTTCCTCTCCTTCTTGTCCTCCTCACCCCCAGATTCTCAGCCAGTGGGGTCCAGTGTGTGACAGGGAGAGAGAAGCTGGGGGCGCAGCCACCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:30899676|30899987 hsa-miR-141-5p 0 0 1
chr6:30899676|30899987 hsa-miR-141-3p 0 0 1
chr6:30899676|30899987 hsa-miR-200a-5p 0 0 1
chr6:30899676|30899987 hsa-miR-200a-3p 0 0 1
chr6:30899676|30899987 hsa-miR-377-5p 0 0 1
chr6:30899676|30899987 hsa-miR-377-3p 0 0 1
chr6:30899676|30899987 hsa-miR-492 0 1 1
chr6:30899676|30899987 hsa-miR-494-5p 0 0 1
chr6:30899676|30899987 hsa-miR-494-3p 0 0 1
chr6:30899676|30899987 hsa-miR-580-5p 0 0 1
chr6:30899676|30899987 hsa-miR-580-3p 0 0 1
chr6:30899676|30899987 hsa-miR-583 0 1 1
chr6:30899676|30899987 hsa-miR-603 0 1 1
chr6:30899676|30899987 hsa-miR-604 0 0 1
chr6:30899676|30899987 hsa-miR-625-5p 0 0 1
chr6:30899676|30899987 hsa-miR-625-3p 0 0 1
chr6:30899676|30899987 hsa-miR-631 0 0 1
chr6:30899676|30899987 hsa-miR-635 1 0 1
chr6:30899676|30899987 hsa-miR-637 0 1 1
chr6:30899676|30899987 hsa-miR-643 0 0 1
chr6:30899676|30899987 hsa-miR-647 0 1 1
chr6:30899676|30899987 hsa-miR-892b 0 0 1
chr6:30899676|30899987 hsa-miR-942-5p 0 0 1
chr6:30899676|30899987 hsa-miR-942-3p 0 0 1
chr6:30899676|30899987 hsa-miR-1275 0 0 1
chr6:30899676|30899987 hsa-miR-486-5p 0 0 1
chr6:30899676|30899987 hsa-miR-339-5p 1 1 1
chr6:30899676|30899987 hsa-miR-361-3p 0 0 1
chr6:30899676|30899987 hsa-miR-502-5p 0 0 1
chr6:30899676|30899987 hsa-miR-188-3p 0 0 1
chr6:30899676|30899987 hsa-miR-769-3p 0 0 1
chr6:30899676|30899987 hsa-miR-450b-3p 0 0 1
chr6:30899676|30899987 hsa-miR-1260 0 0 1
chr6:30899676|30899987 hsa-miR-1274a 0 0 1
chr6:30899676|30899987 hsa-miR-550 0 0 1
chr6:30899676|30899987 hsa-miR-1274b 0 0 1
chr6:30899676|30899987 hsa-miR-608 0 1 0
chr6:30899676|30899987 hsa-miR-617 0 1 0
chr6:30899676|30899987 hsa-miR-762 1 0 0
chr6:30899676|30899987 hsa-miR-2113 0 1 0
chr6:30899676|30899987 hsa-miR-765 0 1 0
chr6:30899676|30899987 hsa-miR-663b 1 0 0
chr6:30899676|30899987 hsa-miR-378b 0 1 0
chr6:30899676|30899987 hsa-miR-3153 0 1 0
chr6:30899676|30899987 hsa-miR-3175 1 0 0
chr6:30899676|30899987 hsa-miR-4264 0 1 0
chr6:30899676|30899987 hsa-miR-4286 0 1 0
chr6:30899676|30899987 hsa-miR-3661 0 1 0
chr6:30899676|30899987 hsa-miR-4428 0 1 0
chr6:30899676|30899987 hsa-miR-4510 1 1 0
chr6:30899676|30899987 hsa-miR-4533 1 0 0
chr6:30899676|30899987 hsa-miR-4535 0 1 0
chr6:30899676|30899987 hsa-miR-4634 1 0 0
chr6:30899676|30899987 hsa-miR-4689 0 1 0
chr6:30899676|30899987 hsa-miR-5193 1 1 0
chr6:30899676|30899987 hsa-miR-5787 1 0 0
chr6:30899676|30899987 hsa-miR-6075 0 1 0
chr6:30899676|30899987 hsa-miR-6081 1 0 0
chr6:30899676|30899987 hsa-miR-6090 1 0 0
chr6:30899676|30899987 hsa-miR-8085 1 0 0
chr6:30899676|30899987 hsa-miR-12116 1 0 0
chr6:30899676|30899987 hsa-miR-12118 0 1 0
chr6:30899676|30899987 hsa-miR-135a-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6749-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6879-3p 0 1 0
chr6:30899676|30899987 hsa-miR-6857-5p 1 0 0
chr6:30899676|30899987 hsa-miR-1233-3p 1 0 0
chr6:30899676|30899987 hsa-miR-766-3p 0 1 0
chr6:30899676|30899987 hsa-miR-6881-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6728-5p 1 0 0
chr6:30899676|30899987 hsa-miR-7114-5p 1 1 0
chr6:30899676|30899987 hsa-miR-7847-3p 0 1 0
chr6:30899676|30899987 hsa-miR-7154-3p 0 1 0
chr6:30899676|30899987 hsa-miR-6875-3p 1 1 0
chr6:30899676|30899987 hsa-miR-6762-3p 1 0 0
chr6:30899676|30899987 hsa-miR-197-5p 1 0 0
chr6:30899676|30899987 hsa-miR-3189-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6873-3p 0 1 0
chr6:30899676|30899987 hsa-miR-7110-3p 0 1 0
chr6:30899676|30899987 hsa-miR-6787-3p 0 1 0
chr6:30899676|30899987 hsa-miR-6845-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6716-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6796-5p 1 0 0
chr6:30899676|30899987 hsa-miR-877-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6805-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6798-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6765-3p 1 0 0
chr6:30899676|30899987 hsa-miR-4436b-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6884-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6852-5p 0 1 0
chr6:30899676|30899987 hsa-miR-6772-3p 0 1 0
chr6:30899676|30899987 hsa-miR-7109-5p 1 1 0
chr6:30899676|30899987 hsa-miR-6763-3p 1 0 0
chr6:30899676|30899987 hsa-miR-7108-3p 1 0 0
chr6:30899676|30899987 hsa-miR-4707-3p 1 1 0
chr6:30899676|30899987 hsa-miR-6894-3p 1 1 0
chr6:30899676|30899987 hsa-miR-6803-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6757-3p 0 1 0
chr6:30899676|30899987 hsa-miR-296-3p 1 0 0
chr6:30899676|30899987 hsa-miR-3667-3p 1 0 0
chr6:30899676|30899987 hsa-miR-149-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6742-3p 1 0 0
chr6:30899676|30899987 hsa-miR-146b-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6769a-3p 1 0 0
chr6:30899676|30899987 hsa-miR-5010-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6889-3p 0 1 0
chr6:30899676|30899987 hsa-miR-4687-5p 0 1 0
chr6:30899676|30899987 hsa-miR-4778-3p 0 1 0
chr6:30899676|30899987 hsa-miR-1238-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6867-3p 0 1 0
chr6:30899676|30899987 hsa-miR-2355-3p 0 1 0
chr6:30899676|30899987 hsa-miR-3605-3p 1 0 0
chr6:30899676|30899987 hsa-miR-4749-3p 1 0 0
chr6:30899676|30899987 hsa-miR-130b-5p 1 1 0
chr6:30899676|30899987 hsa-miR-6779-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6847-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6839-3p 1 0 0
chr6:30899676|30899987 hsa-miR-3156-3p 0 1 0
chr6:30899676|30899987 hsa-miR-651-3p 0 1 0
chr6:30899676|30899987 hsa-miR-6812-5p 1 1 0
chr6:30899676|30899987 hsa-miR-6870-5p 1 0 0
chr6:30899676|30899987 hsa-miR-1343-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6726-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6743-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6752-5p 0 1 0
chr6:30899676|30899987 hsa-miR-6756-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6803-5p 1 1 0
chr6:30899676|30899987 hsa-miR-6842-5p 0 1 0
chr6:30899676|30899987 hsa-miR-7110-5p 0 1 0
chr6:30899676|30899987 hsa-miR-1249-5p 1 1 0
chr6:30899676|30899987 hsa-miR-6751-5p 1 1 0
chr6:30899676|30899987 hsa-miR-6797-5p 1 0 0
chr6:30899676|30899987 hsa-miR-7111-5p 1 1 0
chr6:30899676|30899987 hsa-miR-3620-5p 1 0 0
chr6:30899676|30899987 hsa-miR-5196-5p 1 0 0
chr6:30899676|30899987 hsa-miR-328-5p 1 0 0
chr6:30899676|30899987 hsa-miR-4725-3p 1 0 0
chr6:30899676|30899987 hsa-miR-4745-3p 1 0 0
chr6:30899676|30899987 hsa-miR-4745-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6795-5p 1 1 0
chr6:30899676|30899987 hsa-miR-6858-5p 0 1 0
chr6:30899676|30899987 hsa-miR-6887-5p 1 1 0
chr6:30899676|30899987 hsa-miR-6885-5p 1 0 0
chr6:30899676|30899987 hsa-miR-939-5p 1 0 0
chr6:30899676|30899987 hsa-miR-10396a-3p 1 0 0
chr6:30899676|30899987 hsa-miR-10396b-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6739-5p 0 1 0
chr6:30899676|30899987 hsa-miR-6856-5p 1 1 0
chr6:30899676|30899987 hsa-miR-1271-3p 1 1 0
chr6:30899676|30899987 hsa-miR-4665-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6855-5p 0 1 0
chr6:30899676|30899987 hsa-miR-4747-5p 1 0 0
chr6:30899676|30899987 hsa-miR-4716-3p 1 0 0
chr6:30899676|30899987 hsa-miR-5591-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6724-5p 1 0 0
chr6:30899676|30899987 hsa-miR-6756-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6792-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6829-3p 1 0 0
chr6:30899676|30899987 hsa-miR-10392-3p 1 0 0
chr6:30899676|30899987 hsa-miR-6529-3p 0 1 0
chr6:30899676|30899987 hsa-miR-6859-5p 0 1 0
chr6:30899676|30899987 hsa-miR-4691-5p 0 1 0
chr6:30899676|30899987 hsa-miR-4485-3p 0 1 0
chr6:30899676|30899987 hsa-miR-6833-3p 0 1 0
chr6:30899676|30899987 hsa-miR-3622b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:30899676|30899987
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MGRCSLFPPNPNIYSTETYRLREVLATRLQVGSGGD
Nucleotide Sequence ATGGGCCGTTGCTCCCTCTTTCCCCCCAATCCCAATATTTACTCCACAGAAACGTATAGGCTTAGAGAAGTTCTAGCTACAAGACTGCAAGTGGGAAGTGGGGGTGACTGA
CircID chr6:30899676|30899987
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MRTSTGAGTRKHFPLLLVLLTPRFSASGVQCVTGREKLGAQPP
Nucleotide Sequence CTGAGGACAAGTACAGGAGCAGGCACAAGGAAACATTTTCCTCTCCTTCTTGTCCTCCTCACCCCCAGATTCTCAGCCAGTGGGGTCCAGTGTGTGACAGGGAGAGAGAAGCTGGGGGCGCAGCCACCT
CircID chr6:30899676|30899987
ORF Type ORF3
Protein Length 65
Nucleotide Length 195
Protein Sequence MRAGAGLPPGPVFQVMEEEEAQAEDKYRSRHKETFSSPSCPPHPQILSQWGPVCDREREAGGAAT
Nucleotide Sequence CTGAGGGCTGGGGCGGGGCTACCCCCAGGTCCAGTGTTTCAGGTGATGGAGGAGGAAGAAGCCCAAGCTGAGGACAAGTACAGGAGCAGGCACAAGGAAACATTTTCCTCTCCTTCTTGTCCTCCTCACCCCCAGATTCTCAGCCAGTGGGGTCCAGTGTGTGACAGGGAGAGAGAAGCTGGGGGCGCAGCCACC
CircID chr6:30899676|30899987
ORF Type ORF4
Protein Length 45
Nucleotide Length 138
Protein Sequence MFPCACSCTCPQLGLLPPPSPETLDLGVAPPQPSVTPTSHLQSCS
Nucleotide Sequence ATGTTTCCTTGTGCCTGCTCCTGTACTTGTCCTCAGCTTGGGCTTCTTCCTCCTCCATCACCTGAAACACTGGACCTGGGGGTAGCCCCGCCCCAGCCCTCAGTCACCCCCACTTCCCACTTGCAGTCTTGTAGCTAG
CircID chr6:30899676|30899987
ORF Type ORF5
Protein Length 42
Nucleotide Length 129
Protein Sequence MAENLGVRRTRRRGKCFLVPAPVLVLSLGFFLLHHLKHWTWG
Nucleotide Sequence CTGGCTGAGAATCTGGGGGTGAGGAGGACAAGAAGGAGAGGAAAATGTTTCCTTGTGCCTGCTCCTGTACTTGTCCTCAGCTTGGGCTTCTTCCTCCTCCATCACCTGAAACACTGGACCTGGGGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab