CircRNA Information

General Information
circRNA Basic Information
CircID chr6:30899760|30899898
Strand +
CircType exon
Host Gene ENSG00000204580.10;
Algorism CIRI2;
Sequence AAGACTGCAAGTGGGAAGTGGGGGTGACTGAGGGCTGGGGCGGGGCTACCCCCAGGTCCAGTGTTTCAGGTGATGGAGGAGGAAGAAGCCCAAGCTGAGGACAAGTACAGGAGCAGGCACAAGGAAACATTTTCCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:30899760|30899898 hsa-miR-141-5p 0 0 1
chr6:30899760|30899898 hsa-miR-141-3p 0 0 1
chr6:30899760|30899898 hsa-miR-200a-5p 0 0 1
chr6:30899760|30899898 hsa-miR-200a-3p 0 0 1
chr6:30899760|30899898 hsa-miR-492 0 1 1
chr6:30899760|30899898 hsa-miR-494-5p 0 0 1
chr6:30899760|30899898 hsa-miR-494-3p 0 0 1
chr6:30899760|30899898 hsa-miR-631 0 0 1
chr6:30899760|30899898 hsa-miR-635 0 0 1
chr6:30899760|30899898 hsa-miR-637 0 0 1
chr6:30899760|30899898 hsa-miR-486-5p 0 0 1
chr6:30899760|30899898 hsa-miR-502-5p 0 0 1
chr6:30899760|30899898 hsa-miR-188-3p 0 0 1
chr6:30899760|30899898 hsa-miR-1260 0 0 1
chr6:30899760|30899898 hsa-miR-550 0 0 1
chr6:30899760|30899898 hsa-miR-617 0 1 0
chr6:30899760|30899898 hsa-miR-632 1 0 0
chr6:30899760|30899898 hsa-miR-636 1 0 0
chr6:30899760|30899898 hsa-miR-2113 0 1 0
chr6:30899760|30899898 hsa-miR-935 1 0 0
chr6:30899760|30899898 hsa-miR-663b 1 0 0
chr6:30899760|30899898 hsa-miR-378b 0 1 0
chr6:30899760|30899898 hsa-miR-4301 1 0 0
chr6:30899760|30899898 hsa-miR-4264 0 1 0
chr6:30899760|30899898 hsa-miR-3661 0 1 0
chr6:30899760|30899898 hsa-miR-3943 1 0 0
chr6:30899760|30899898 hsa-miR-4535 0 1 0
chr6:30899760|30899898 hsa-miR-5193 1 1 0
chr6:30899760|30899898 hsa-miR-12116 1 0 0
chr6:30899760|30899898 hsa-miR-6749-3p 1 0 0
chr6:30899760|30899898 hsa-miR-668-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6879-3p 1 1 0
chr6:30899760|30899898 hsa-miR-1233-3p 1 0 0
chr6:30899760|30899898 hsa-miR-766-3p 0 1 0
chr6:30899760|30899898 hsa-miR-6875-3p 1 1 0
chr6:30899760|30899898 hsa-miR-3189-5p 1 0 0
chr6:30899760|30899898 hsa-miR-6849-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6726-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6787-3p 1 1 0
chr6:30899760|30899898 hsa-miR-6845-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6788-3p 1 0 0
chr6:30899760|30899898 hsa-miR-532-3p 1 0 0
chr6:30899760|30899898 hsa-miR-4436b-5p 1 0 0
chr6:30899760|30899898 hsa-miR-6884-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6772-3p 1 1 0
chr6:30899760|30899898 hsa-miR-4763-5p 1 0 0
chr6:30899760|30899898 hsa-miR-6763-3p 1 0 0
chr6:30899760|30899898 hsa-miR-4707-3p 1 1 0
chr6:30899760|30899898 hsa-miR-6894-3p 1 1 0
chr6:30899760|30899898 hsa-miR-6803-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6514-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6757-3p 0 1 0
chr6:30899760|30899898 hsa-miR-6769a-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6870-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6811-3p 1 0 0
chr6:30899760|30899898 hsa-miR-4687-5p 1 1 0
chr6:30899760|30899898 hsa-miR-4758-3p 1 0 0
chr6:30899760|30899898 hsa-miR-4778-3p 0 1 0
chr6:30899760|30899898 hsa-miR-1238-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6887-3p 1 0 0
chr6:30899760|30899898 hsa-miR-2355-3p 0 1 0
chr6:30899760|30899898 hsa-miR-6865-3p 1 0 0
chr6:30899760|30899898 hsa-miR-4749-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6859-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6802-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6798-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6779-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6729-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6847-3p 1 0 0
chr6:30899760|30899898 hsa-miR-3156-3p 0 1 0
chr6:30899760|30899898 hsa-miR-651-3p 0 1 0
chr6:30899760|30899898 hsa-miR-6842-5p 1 0 0
chr6:30899760|30899898 hsa-miR-3620-5p 1 0 0
chr6:30899760|30899898 hsa-miR-4745-3p 1 0 0
chr6:30899760|30899898 hsa-miR-10396a-3p 1 0 0
chr6:30899760|30899898 hsa-miR-10396b-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6799-3p 1 0 0
chr6:30899760|30899898 hsa-miR-1271-3p 1 1 0
chr6:30899760|30899898 hsa-miR-6784-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6792-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6829-3p 1 0 0
chr6:30899760|30899898 hsa-miR-10392-3p 1 0 0
chr6:30899760|30899898 hsa-miR-6859-5p 0 1 0
chr6:30899760|30899898 hsa-miR-6783-3p 1 0 0
chr6:30899760|30899898 hsa-miR-4691-5p 0 1 0
chr6:30899760|30899898 hsa-miR-3622b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:30899760|30899898
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MRAGAGLPPGPVFQVMEEEEAQAEDKYRSRHKETFSS
Nucleotide Sequence CTGAGGGCTGGGGCGGGGCTACCCCCAGGTCCAGTGTTTCAGGTGATGGAGGAGGAAGAAGCCCAAGCTGAGGACAAGTACAGGAGCAGGCACAAGGAAACATTTTCCTCT
CircID chr6:30899760|30899898
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MFPCACSCTCPQLGLLPPPSPETLDLGVAPPQPSVTPTSHLQS
Nucleotide Sequence ATGTTTCCTTGTGCCTGCTCCTGTACTTGTCCTCAGCTTGGGCTTCTTCCTCCTCCATCACCTGAAACACTGGACCTGGGGGTAGCCCCGCCCCAGCCCTCAGTCACCCCCACTTCCCACTTGCAGTCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab