CircRNA Information

General Information
circRNA Basic Information
CircID chr6:30931873|30932022
Strand -
CircType exon
Host Gene ENSG00000196260.3;
Algorism CIRI2;
Sequence GCTCCCCGGCACAGTTCCTCTTCCCCAGCAATGCCCCTCCAGAGCCTCTTGGAAGCTCAGGACTGGGGTGTCTCTGTCACTCTCAGGGACCATGAAGTCCCACCCCTTTTCTCTGGCCTCTTCTTGCCACAGGGACCCAGGAGTCCTGCC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:30931873|30932022 hsa-miR-31-5p 0 0 1
chr6:30931873|30932022 hsa-miR-31-3p 0 0 1
chr6:30931873|30932022 hsa-miR-608 1 0 1
chr6:30931873|30932022 hsa-miR-760 1 0 1
chr6:30931873|30932022 hsa-miR-939-5p 0 0 1
chr6:30931873|30932022 hsa-miR-939-3p 0 0 1
chr6:30931873|30932022 hsa-miR-1200 0 1 1
chr6:30931873|30932022 hsa-miR-1286 0 0 1
chr6:30931873|30932022 hsa-miR-1256 0 0 1
chr6:30931873|30932022 hsa-miR-339-5p 0 0 1
chr6:30931873|30932022 hsa-miR-423-5p 0 0 1
chr6:30931873|30932022 hsa-miR-125a-5p 0 0 1
chr6:30931873|30932022 hsa-miR-542-3p 0 0 1
chr6:30931873|30932022 hsa-miR-1274a 0 0 1
chr6:30931873|30932022 hsa-miR-125b 0 0 1
chr6:30931873|30932022 hsa-miR-1274b 0 0 1
chr6:30931873|30932022 hsa-miR-516b 0 0 1
chr6:30931873|30932022 hsa-miR-637 1 0 0
chr6:30931873|30932022 hsa-miR-663a 1 0 0
chr6:30931873|30932022 hsa-miR-1268a 1 0 0
chr6:30931873|30932022 hsa-miR-1275 1 0 0
chr6:30931873|30932022 hsa-miR-2110 1 1 0
chr6:30931873|30932022 hsa-miR-3125 0 1 0
chr6:30931873|30932022 hsa-miR-3147 1 0 0
chr6:30931873|30932022 hsa-miR-3154 1 0 0
chr6:30931873|30932022 hsa-miR-3175 1 0 0
chr6:30931873|30932022 hsa-miR-3188 1 0 0
chr6:30931873|30932022 hsa-miR-4271 1 1 0
chr6:30931873|30932022 hsa-miR-1268b 1 0 0
chr6:30931873|30932022 hsa-miR-4533 1 0 0
chr6:30931873|30932022 hsa-miR-4648 0 1 0
chr6:30931873|30932022 hsa-miR-4688 1 1 0
chr6:30931873|30932022 hsa-miR-4739 1 0 0
chr6:30931873|30932022 hsa-miR-5698 1 0 0
chr6:30931873|30932022 hsa-miR-5787 1 0 0
chr6:30931873|30932022 hsa-miR-6085 1 0 0
chr6:30931873|30932022 hsa-miR-6088 1 0 0
chr6:30931873|30932022 hsa-miR-6124 1 0 0
chr6:30931873|30932022 hsa-miR-8085 1 1 0
chr6:30931873|30932022 hsa-miR-8089 1 1 0
chr6:30931873|30932022 hsa-miR-12118 1 0 0
chr6:30931873|30932022 hsa-miR-4433b-3p 1 0 0
chr6:30931873|30932022 hsa-miR-4731-5p 1 0 0
chr6:30931873|30932022 hsa-miR-7106-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6825-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6894-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6857-5p 1 0 0
chr6:30931873|30932022 hsa-miR-766-5p 0 1 0
chr6:30931873|30932022 hsa-miR-1236-5p 0 1 0
chr6:30931873|30932022 hsa-miR-5187-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6089 1 1 0
chr6:30931873|30932022 hsa-miR-6880-5p 1 0 0
chr6:30931873|30932022 hsa-miR-4709-3p 1 0 0
chr6:30931873|30932022 hsa-miR-4722-5p 1 0 0
chr6:30931873|30932022 hsa-miR-3677-5p 1 0 0
chr6:30931873|30932022 hsa-miR-197-5p 1 0 0
chr6:30931873|30932022 hsa-miR-7108-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6742-5p 1 0 0
chr6:30931873|30932022 hsa-miR-1292-5p 1 0 0
chr6:30931873|30932022 hsa-miR-3180-3p 1 0 0
chr6:30931873|30932022 hsa-miR-3190-3p 1 0 0
chr6:30931873|30932022 hsa-miR-2467-5p 0 1 0
chr6:30931873|30932022 hsa-miR-23a-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6798-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6782-5p 1 1 0
chr6:30931873|30932022 hsa-miR-6810-5p 1 0 0
chr6:30931873|30932022 hsa-miR-5008-5p 1 0 0
chr6:30931873|30932022 hsa-miR-5006-5p 1 0 0
chr6:30931873|30932022 hsa-miR-1343-3p 0 1 0
chr6:30931873|30932022 hsa-miR-1229-5p 1 0 0
chr6:30931873|30932022 hsa-miR-4640-5p 1 1 0
chr6:30931873|30932022 hsa-miR-4743-5p 1 0 0
chr6:30931873|30932022 hsa-miR-4787-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6824-5p 1 0 0
chr6:30931873|30932022 hsa-miR-2115-5p 0 1 0
chr6:30931873|30932022 hsa-miR-1910-5p 0 1 0
chr6:30931873|30932022 hsa-miR-518c-5p 1 1 0
chr6:30931873|30932022 hsa-miR-670-5p 0 1 0
chr6:30931873|30932022 hsa-miR-4763-3p 1 0 0
chr6:30931873|30932022 hsa-miR-6816-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6870-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6775-5p 1 1 0
chr6:30931873|30932022 hsa-miR-1343-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6737-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6743-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6756-5p 1 1 0
chr6:30931873|30932022 hsa-miR-6803-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6813-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6819-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6851-5p 1 0 0
chr6:30931873|30932022 hsa-miR-11181-3p 1 0 0
chr6:30931873|30932022 hsa-miR-1249-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6751-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6763-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6779-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6797-5p 1 0 0
chr6:30931873|30932022 hsa-miR-7111-5p 1 0 0
chr6:30931873|30932022 hsa-miR-4728-5p 1 0 0
chr6:30931873|30932022 hsa-miR-5196-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6780b-5p 1 1 0
chr6:30931873|30932022 hsa-miR-6862-5p 1 0 0
chr6:30931873|30932022 hsa-miR-10396b-5p 1 0 0
chr6:30931873|30932022 hsa-miR-328-5p 1 0 0
chr6:30931873|30932022 hsa-miR-4725-3p 1 1 0
chr6:30931873|30932022 hsa-miR-4726-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6729-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6738-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6795-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6858-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6887-5p 1 0 0
chr6:30931873|30932022 hsa-miR-6845-5p 1 1 0
chr6:30931873|30932022 hsa-miR-6885-5p 1 0 0
chr6:30931873|30932022 hsa-miR-365a-5p 0 1 0
chr6:30931873|30932022 hsa-miR-365b-5p 1 1 0
chr6:30931873|30932022 hsa-miR-6856-5p 1 0 0
chr6:30931873|30932022 hsa-miR-1914-3p 1 0 0
chr6:30931873|30932022 hsa-miR-6736-5p 1 0 0
chr6:30931873|30932022 hsa-miR-4700-5p 1 1 0
chr6:30931873|30932022 hsa-miR-4667-5p 0 1 0
chr6:30931873|30932022 hsa-miR-550a-5p 0 1 0
chr6:30931873|30932022 hsa-miR-6859-5p 0 1 0
chr6:30931873|30932022 hsa-miR-6783-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:30931873|30932022
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MPLQSLLEAQDWGVSVTLRDHEVPPLFSGLFLPQGPRSPA
Nucleotide Sequence ATGCCCCTCCAGAGCCTCTTGGAAGCTCAGGACTGGGGTGTCTCTGTCACTCTCAGGGACCATGAAGTCCCACCCCTTTTCTCTGGCCTCTTCTTGCCACAGGGACCCAGGAGTCCTGCC
CircID chr6:30931873|30932022
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MSLSGTMKSHPFSLASSCHRDPGVL
Nucleotide Sequence CTGTCACTCTCAGGGACCATGAAGTCCCACCCCTTTTCTCTGGCCTCTTCTTGCCACAGGGACCCAGGAGTCCTG
CircID chr6:30931873|30932022
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MWQEEAREKGWDFMVPESDRDTPVLSFQEALEGHCWGRGTVPGS
Nucleotide Sequence CTGTGGCAAGAAGAGGCCAGAGAAAAGGGGTGGGACTTCATGGTCCCTGAGAGTGACAGAGACACCCCAGTCCTGAGCTTCCAAGAGGCTCTGGAGGGGCATTGCTGGGGAAGAGGAACTGTGCCGGGGAGC
CircID chr6:30931873|30932022
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MGPCGKKRPEKRGGTSWSLRVTETPQS
Nucleotide Sequence CTGGGTCCCTGTGGCAAGAAGAGGCCAGAGAAAAGGGGTGGGACTTCATGGTCCCTGAGAGTGACAGAGACACCCCAGTCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab