CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31144775|31145044
Strand -
CircType exon
Host Gene ENSG00000204536.12;
Algorism CIRI2;
Sequence CTTTTCTTGCAGGGCTTGCCCGTAGAGTTCCTGCTGCTGGGTCAGCTCCTGCCGCAGACTGGCAGCCTCCTCTGTGCTCTCCTGCTGGCCCTGGCGTGCTACCTCCAGCTGCAGCCCCAAGCTAGCCAGGGACTCCTGGGTCTGCTGCAGCTCCTGCTCCAGCTGCTGGGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31144775|31145044 hsa-let-7b-5p 0 0 1
chr6:31144775|31145044 hsa-let-7b-3p 0 0 1
chr6:31144775|31145044 hsa-let-7c-5p 0 0 1
chr6:31144775|31145044 hsa-let-7c-3p 0 0 1
chr6:31144775|31145044 hsa-let-7d-5p 0 0 1
chr6:31144775|31145044 hsa-let-7d-3p 0 0 1
chr6:31144775|31145044 hsa-let-7e-5p 0 0 1
chr6:31144775|31145044 hsa-let-7e-3p 0 0 1
chr6:31144775|31145044 hsa-miR-15a-5p 0 0 1
chr6:31144775|31145044 hsa-miR-15a-3p 0 0 1
chr6:31144775|31145044 hsa-miR-98-5p 0 0 1
chr6:31144775|31145044 hsa-miR-98-3p 0 0 1
chr6:31144775|31145044 hsa-miR-107 0 0 1
chr6:31144775|31145044 hsa-miR-214-5p 0 0 1
chr6:31144775|31145044 hsa-miR-214-3p 0 0 1
chr6:31144775|31145044 hsa-let-7g-5p 0 0 1
chr6:31144775|31145044 hsa-let-7g-3p 0 0 1
chr6:31144775|31145044 hsa-let-7i-5p 0 0 1
chr6:31144775|31145044 hsa-let-7i-3p 0 0 1
chr6:31144775|31145044 hsa-miR-15b-5p 0 0 1
chr6:31144775|31145044 hsa-miR-15b-3p 0 0 1
chr6:31144775|31145044 hsa-miR-195-5p 0 0 1
chr6:31144775|31145044 hsa-miR-195-3p 0 0 1
chr6:31144775|31145044 hsa-miR-424-5p 0 0 1
chr6:31144775|31145044 hsa-miR-424-3p 0 0 1
chr6:31144775|31145044 hsa-miR-497-5p 0 0 1
chr6:31144775|31145044 hsa-miR-497-3p 0 0 1
chr6:31144775|31145044 hsa-miR-558 0 0 1
chr6:31144775|31145044 hsa-miR-618 0 0 1
chr6:31144775|31145044 hsa-miR-622 0 1 1
chr6:31144775|31145044 hsa-miR-646 0 0 1
chr6:31144775|31145044 hsa-miR-1301-5p 0 0 1
chr6:31144775|31145044 hsa-miR-1301-3p 0 0 1
chr6:31144775|31145044 hsa-miR-708-5p 0 0 1
chr6:31144775|31145044 hsa-miR-708-3p 0 0 1
chr6:31144775|31145044 hsa-miR-665 0 1 1
chr6:31144775|31145044 hsa-miR-873-5p 0 0 1
chr6:31144775|31145044 hsa-miR-873-3p 0 0 1
chr6:31144775|31145044 hsa-miR-922 0 1 1
chr6:31144775|31145044 hsa-miR-663b 0 1 1
chr6:31144775|31145044 hsa-miR-485-5p 0 0 1
chr6:31144775|31145044 hsa-miR-1184 0 1 1
chr6:31144775|31145044 hsa-miR-1289 0 0 1
chr6:31144775|31145044 hsa-miR-28-5p 0 1 1
chr6:31144775|31145044 hsa-miR-1207-3p 0 0 1
chr6:31144775|31145044 hsa-miR-103 0 0 1
chr6:31144775|31145044 hsa-miR-16 0 0 1
chr6:31144775|31145044 hsa-let-7a 0 0 1
chr6:31144775|31145044 hsa-let-7f 0 0 1
chr6:31144775|31145044 hsa-miR-637 1 0 0
chr6:31144775|31145044 hsa-miR-762 1 0 0
chr6:31144775|31145044 hsa-miR-920 0 1 0
chr6:31144775|31145044 hsa-miR-3139 0 1 0
chr6:31144775|31145044 hsa-miR-3141 1 0 0
chr6:31144775|31145044 hsa-miR-3196 1 0 0
chr6:31144775|31145044 hsa-miR-3918 0 1 0
chr6:31144775|31145044 hsa-miR-4453 1 1 0
chr6:31144775|31145044 hsa-miR-3135b 1 1 0
chr6:31144775|31145044 hsa-miR-4507 1 0 0
chr6:31144775|31145044 hsa-miR-4508 1 0 0
chr6:31144775|31145044 hsa-miR-4530 1 1 0
chr6:31144775|31145044 hsa-miR-4538 1 1 0
chr6:31144775|31145044 hsa-miR-3960 1 0 0
chr6:31144775|31145044 hsa-miR-4656 1 0 0
chr6:31144775|31145044 hsa-miR-4675 1 0 0
chr6:31144775|31145044 hsa-miR-4688 1 0 0
chr6:31144775|31145044 hsa-miR-4739 1 0 0
chr6:31144775|31145044 hsa-miR-4741 1 0 0
chr6:31144775|31145044 hsa-miR-5047 0 1 0
chr6:31144775|31145044 hsa-miR-5572 1 0 0
chr6:31144775|31145044 hsa-miR-5787 1 0 0
chr6:31144775|31145044 hsa-miR-6069 1 0 0
chr6:31144775|31145044 hsa-miR-6085 1 0 0
chr6:31144775|31145044 hsa-miR-6165 1 1 0
chr6:31144775|31145044 hsa-miR-12115 1 0 0
chr6:31144775|31145044 hsa-miR-6840-3p 1 1 0
chr6:31144775|31145044 hsa-miR-4726-3p 1 0 0
chr6:31144775|31145044 hsa-miR-6861-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6894-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6510-5p 1 1 0
chr6:31144775|31145044 hsa-miR-4768-3p 0 1 0
chr6:31144775|31145044 hsa-miR-4695-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6746-5p 1 0 0
chr6:31144775|31145044 hsa-miR-4722-5p 1 1 0
chr6:31144775|31145044 hsa-miR-24-3p 0 1 0
chr6:31144775|31145044 hsa-miR-6820-5p 0 1 0
chr6:31144775|31145044 hsa-miR-6721-5p 0 1 0
chr6:31144775|31145044 hsa-miR-1178-5p 1 0 0
chr6:31144775|31145044 hsa-miR-503-5p 1 1 0
chr6:31144775|31145044 hsa-miR-486-3p 1 0 0
chr6:31144775|31145044 hsa-miR-6874-5p 0 1 0
chr6:31144775|31145044 hsa-miR-5006-5p 1 1 0
chr6:31144775|31145044 hsa-miR-4640-5p 1 1 0
chr6:31144775|31145044 hsa-miR-6753-5p 1 0 0
chr6:31144775|31145044 hsa-miR-4690-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6847-5p 0 1 0
chr6:31144775|31145044 hsa-miR-6781-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6895-5p 1 1 0
chr6:31144775|31145044 hsa-let-7a-5p 0 1 0
chr6:31144775|31145044 hsa-miR-1233-5p 1 0 0
chr6:31144775|31145044 hsa-miR-4763-3p 1 1 0
chr6:31144775|31145044 hsa-miR-5001-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6726-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6737-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6743-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6803-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6813-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6819-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6851-5p 1 1 0
chr6:31144775|31145044 hsa-miR-6722-3p 1 0 0
chr6:31144775|31145044 hsa-miR-6751-5p 1 0 0
chr6:31144775|31145044 hsa-miR-1915-3p 1 0 0
chr6:31144775|31145044 hsa-miR-4685-5p 1 1 0
chr6:31144775|31145044 hsa-miR-4726-5p 1 1 0
chr6:31144775|31145044 hsa-miR-6777-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6846-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6848-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6858-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6845-5p 1 0 0
chr6:31144775|31145044 hsa-miR-939-5p 1 0 0
chr6:31144775|31145044 hsa-miR-1914-3p 1 0 0
chr6:31144775|31145044 hsa-miR-6855-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6762-5p 1 0 0
chr6:31144775|31145044 hsa-miR-6837-5p 1 1 0
chr6:31144775|31145044 hsa-miR-3619-5p 0 1 0
chr6:31144775|31145044 hsa-miR-6838-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:31144775|31145044
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence MQGLPVEFLLLGQLLPQTGSLLCALLLALACYLQLQPQASQGLLGLLQLLLQLLGH
Nucleotide Sequence TTGCAGGGCTTGCCCGTAGAGTTCCTGCTGCTGGGTCAGCTCCTGCCGCAGACTGGCAGCCTCCTCTGTGCTCTCCTGCTGGCCCTGGCGTGCTACCTCCAGCTGCAGCCCCAAGCTAGCCAGGGACTCCTGGGTCTGCTGCAGCTCCTGCTCCAGCTGCTGGGCCAC
CircID chr6:31144775|31145044
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MAASSVLSCWPWRATSSCSPKLARDSWVCCSSCSSCWA
Nucleotide Sequence CTGGCAGCCTCCTCTGTGCTCTCCTGCTGGCCCTGGCGTGCTACCTCCAGCTGCAGCCCCAAGCTAGCCAGGGACTCCTGGGTCTGCTGCAGCTCCTGCTCCAGCTGCTGGGCC
CircID chr6:31144775|31145044
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MEQELQQTQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEK
Nucleotide Sequence CTGGAGCAGGAGCTGCAGCAGACCCAGGAGTCCCTGGCTAGCTTGGGGCTGCAGCTGGAGGTAGCACGCCAGGGCCAGCAGGAGAGCACAGAGGAGGCTGCCAGTCTGCGGCAGGAGCTGACCCAGCAGCAGGAACTCTACGGGCAAGCCCTGCAAGAAAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab