CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31270015|31270272
Strand -
CircType exon
Host Gene ENSG00000204525.13;
Algorism CIRI2;
Sequence AGCTAGGACAACCAGGACAGCCAGGCCAGCAACGATGCCCATGATGGGGATGGTGGGCTGGGAAGATGGCTCTGGGAAAGGAGGAGAAGGTGAGGGGCCCTGACCCCCAAGCCTCAGCCCTGACCCGGCTGAAGGGCTCCAGAAGGACTTCTGCTTTCTCTGATAAGAGATGTGACCCCCCATTCCCCTCCTTACCCCAGCTCAGGGTGAGGGGCTCTTGCAGCCCCTCGTGCTGCATATGGCACGTGTATCTCTGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31270015|31270272 hsa-miR-107 0 0 1
chr6:31270015|31270272 hsa-miR-335-5p 0 0 1
chr6:31270015|31270272 hsa-miR-335-3p 0 0 1
chr6:31270015|31270272 hsa-miR-555 0 0 1
chr6:31270015|31270272 hsa-miR-558 0 0 1
chr6:31270015|31270272 hsa-miR-298 0 0 1
chr6:31270015|31270272 hsa-miR-1237-5p 0 0 1
chr6:31270015|31270272 hsa-miR-1237-3p 0 0 1
chr6:31270015|31270272 hsa-miR-1299 0 0 1
chr6:31270015|31270272 hsa-miR-1248 0 0 1
chr6:31270015|31270272 hsa-miR-1275 0 0 1
chr6:31270015|31270272 hsa-miR-1225-3p 0 0 1
chr6:31270015|31270272 hsa-miR-296-5p 0 1 1
chr6:31270015|31270272 hsa-miR-485-5p 0 0 1
chr6:31270015|31270272 hsa-miR-361-5p 0 1 1
chr6:31270015|31270272 hsa-miR-423-5p 0 1 1
chr6:31270015|31270272 hsa-miR-125a-5p 0 0 1
chr6:31270015|31270272 hsa-miR-1233 0 0 1
chr6:31270015|31270272 hsa-miR-125b 0 0 1
chr6:31270015|31270272 hsa-miR-103 0 0 1
chr6:31270015|31270272 hsa-miR-1308 0 0 1
chr6:31270015|31270272 hsa-miR-516b 0 0 1
chr6:31270015|31270272 hsa-miR-129-3p 0 0 1
chr6:31270015|31270272 hsa-miR-453 0 0 1
chr6:31270015|31270272 hsa-miR-638 1 0 0
chr6:31270015|31270272 hsa-miR-658 1 0 0
chr6:31270015|31270272 hsa-miR-1264 0 1 0
chr6:31270015|31270272 hsa-miR-762 1 1 0
chr6:31270015|31270272 hsa-miR-3154 1 0 0
chr6:31270015|31270272 hsa-miR-3176 0 1 0
chr6:31270015|31270272 hsa-miR-320e 1 0 0
chr6:31270015|31270272 hsa-miR-4259 1 0 0
chr6:31270015|31270272 hsa-miR-4487 1 1 0
chr6:31270015|31270272 hsa-miR-4505 1 0 0
chr6:31270015|31270272 hsa-miR-1587 1 0 0
chr6:31270015|31270272 hsa-miR-4539 1 0 0
chr6:31270015|31270272 hsa-miR-4651 1 0 0
chr6:31270015|31270272 hsa-miR-4656 1 1 0
chr6:31270015|31270272 hsa-miR-4689 1 0 0
chr6:31270015|31270272 hsa-miR-4739 1 1 0
chr6:31270015|31270272 hsa-miR-4741 1 0 0
chr6:31270015|31270272 hsa-miR-5194 1 0 0
chr6:31270015|31270272 hsa-miR-5572 1 0 0
chr6:31270015|31270272 hsa-miR-5685 0 1 0
chr6:31270015|31270272 hsa-miR-5787 1 1 0
chr6:31270015|31270272 hsa-miR-6085 0 1 0
chr6:31270015|31270272 hsa-miR-6132 0 1 0
chr6:31270015|31270272 hsa-miR-6133 1 0 0
chr6:31270015|31270272 hsa-miR-7977 0 1 0
chr6:31270015|31270272 hsa-miR-8089 1 0 0
chr6:31270015|31270272 hsa-miR-12118 1 1 0
chr6:31270015|31270272 hsa-miR-141-5p 0 1 0
chr6:31270015|31270272 hsa-miR-4433b-3p 1 0 0
chr6:31270015|31270272 hsa-miR-6749-3p 1 0 0
chr6:31270015|31270272 hsa-miR-4665-3p 1 0 0
chr6:31270015|31270272 hsa-miR-6747-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6765-5p 1 0 0
chr6:31270015|31270272 hsa-miR-125b-1-3p 1 0 0
chr6:31270015|31270272 hsa-miR-7106-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6510-5p 1 0 0
chr6:31270015|31270272 hsa-miR-4695-5p 1 0 0
chr6:31270015|31270272 hsa-miR-3064-5p 1 1 0
chr6:31270015|31270272 hsa-miR-7160-5p 0 1 0
chr6:31270015|31270272 hsa-miR-6890-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6727-5p 1 0 0
chr6:31270015|31270272 hsa-miR-197-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6716-5p 1 1 0
chr6:31270015|31270272 hsa-miR-423-3p 1 0 0
chr6:31270015|31270272 hsa-miR-6871-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6868-3p 0 1 0
chr6:31270015|31270272 hsa-miR-6798-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6881-5p 1 1 0
chr6:31270015|31270272 hsa-miR-345-3p 1 0 0
chr6:31270015|31270272 hsa-miR-6852-5p 1 0 0
chr6:31270015|31270272 hsa-miR-7109-5p 1 0 0
chr6:31270015|31270272 hsa-miR-1229-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6784-5p 1 0 0
chr6:31270015|31270272 hsa-miR-4640-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6803-3p 0 1 0
chr6:31270015|31270272 hsa-miR-3127-5p 0 1 0
chr6:31270015|31270272 hsa-miR-6771-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6749-5p 1 0 0
chr6:31270015|31270272 hsa-miR-7111-3p 1 0 0
chr6:31270015|31270272 hsa-miR-4743-5p 1 0 0
chr6:31270015|31270272 hsa-miR-4446-3p 1 0 0
chr6:31270015|31270272 hsa-miR-149-3p 1 0 0
chr6:31270015|31270272 hsa-miR-937-5p 1 0 0
chr6:31270015|31270272 hsa-miR-3162-5p 1 1 0
chr6:31270015|31270272 hsa-miR-6769a-3p 0 1 0
chr6:31270015|31270272 hsa-miR-7160-3p 0 1 0
chr6:31270015|31270272 hsa-miR-664b-5p 1 0 0
chr6:31270015|31270272 hsa-miR-1296-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6792-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6886-3p 0 1 0
chr6:31270015|31270272 hsa-miR-4749-3p 0 1 0
chr6:31270015|31270272 hsa-miR-6795-3p 0 1 0
chr6:31270015|31270272 hsa-miR-6880-3p 1 1 0
chr6:31270015|31270272 hsa-miR-1207-5p 1 0 0
chr6:31270015|31270272 hsa-miR-4763-3p 1 0 0
chr6:31270015|31270272 hsa-miR-6812-5p 1 1 0
chr6:31270015|31270272 hsa-miR-6816-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6870-5p 1 0 0
chr6:31270015|31270272 hsa-miR-5001-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6752-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6754-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6756-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6803-5p 1 1 0
chr6:31270015|31270272 hsa-miR-6813-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6819-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6842-5p 1 0 0
chr6:31270015|31270272 hsa-miR-1249-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6722-3p 1 0 0
chr6:31270015|31270272 hsa-miR-6751-5p 0 1 0
chr6:31270015|31270272 hsa-miR-6763-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6779-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6780a-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6797-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6808-5p 1 0 0
chr6:31270015|31270272 hsa-miR-320a-5p 0 1 0
chr6:31270015|31270272 hsa-miR-3620-5p 1 1 0
chr6:31270015|31270272 hsa-miR-4728-5p 1 0 0
chr6:31270015|31270272 hsa-miR-5196-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6780b-5p 1 0 0
chr6:31270015|31270272 hsa-miR-328-5p 1 1 0
chr6:31270015|31270272 hsa-miR-4649-5p 1 0 0
chr6:31270015|31270272 hsa-miR-4685-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6794-5p 1 1 0
chr6:31270015|31270272 hsa-miR-6846-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6848-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6858-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6887-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6889-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6885-5p 1 0 0
chr6:31270015|31270272 hsa-miR-4769-5p 1 0 0
chr6:31270015|31270272 hsa-miR-1266-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6758-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6736-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6855-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6891-5p 1 1 0
chr6:31270015|31270272 hsa-miR-3184-5p 0 1 0
chr6:31270015|31270272 hsa-miR-6791-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6862-3p 0 1 0
chr6:31270015|31270272 hsa-miR-10401-3p 1 0 0
chr6:31270015|31270272 hsa-miR-6891-3p 0 1 0
chr6:31270015|31270272 hsa-miR-3085-3p 0 1 0
chr6:31270015|31270272 hsa-miR-323b-5p 1 0 0
chr6:31270015|31270272 hsa-miR-6876-3p 0 1 0
chr6:31270015|31270272 hsa-miR-6504-5p 0 1 0
chr6:31270015|31270272 hsa-miR-494-5p 1 1 0
chr6:31270015|31270272 hsa-miR-1250-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:31270015|31270272
ORF Type ORF1
Protein Length 64
Nucleotide Length 192
Protein Sequence MALGKEEKVRGPDPQASALTRLKGSRRTSAFSDKRCDPPFPSLPQLRVRGSCSPSCCIWHVYLC
Nucleotide Sequence ATGGCTCTGGGAAAGGAGGAGAAGGTGAGGGGCCCTGACCCCCAAGCCTCAGCCCTGACCCGGCTGAAGGGCTCCAGAAGGACTTCTGCTTTCTCTGATAAGAGATGTGACCCCCCATTCCCCTCCTTACCCCAGCTCAGGGTGAGGGGCTCTTGCAGCCCCTCGTGCTGCATATGGCACGTGTATCTCTGC
CircID chr6:31270015|31270272
ORF Type ORF2
Protein Length 61
Nucleotide Length 183
Protein Sequence MGGHISYQRKQKSFWSPSAGSGLRLGGQGPSPSPPFPEPSSQPTIPIMGIVAGLAVLVVLA
Nucleotide Sequence ATGGGGGGTCACATCTCTTATCAGAGAAAGCAGAAGTCCTTCTGGAGCCCTTCAGCCGGGTCAGGGCTGAGGCTTGGGGGTCAGGGCCCCTCACCTTCTCCTCCTTTCCCAGAGCCATCTTCCCAGCCCACCATCCCCATCATGGGCATCGTTGCTGGCCTGGCTGTCCTGGTTGTCCTAGCT
CircID chr6:31270015|31270272
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MGVRAPHLLLLSQSHLPSPPSPSWASLLAWLSWLS
Nucleotide Sequence TTGGGGGTCAGGGCCCCTCACCTTCTCCTCCTTTCCCAGAGCCATCTTCCCAGCCCACCATCCCCATCATGGGCATCGTTGCTGGCCTGGCTGTCCTGGTTGTCCTAG
CircID chr6:31270015|31270272
ORF Type ORF4
Protein Length 79
Nucleotide Length 237
Protein Sequence MQHEGLQEPLTLSWGKEGNGGSHLLSEKAEVLLEPFSRVRAEAWGSGPLTFSSFPRAIFPAHHPHHGHRCWPGCPGCPS
Nucleotide Sequence ATGCAGCACGAGGGGCTGCAAGAGCCCCTCACCCTGAGCTGGGGTAAGGAGGGGAATGGGGGGTCACATCTCTTATCAGAGAAAGCAGAAGTCCTTCTGGAGCCCTTCAGCCGGGTCAGGGCTGAGGCTTGGGGGTCAGGGCCCCTCACCTTCTCCTCCTTTCCCAGAGCCATCTTCCCAGCCCACCATCCCCATCATGGGCATCGTTGCTGGCCTGGCTGTCCTGGTTGTCCTAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab