CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31270039|31270334
Strand +
CircType exon
Host Gene ENSG00000204525.13;
Algorism CIRI2;
Sequence CAGGCCAGCAGGAGATGGAACCTTCCAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGACAAGAGCAGAGATACACGTGCCATATGCAGCACGAGGGGCTGCAAGAGCCCCTCACCCTGAGCTGGGGTAAGGAGGGGAATGGGGGGTCACATCTCTTATCAGAGAAAGCAGAAGTCCTTCTGGAGCCCTTCAGCCGGGTCAGGGCTGAGGCTTGGGGGTCAGGGCCCCTCACCTTCTCCTCCTTTCCCAGAGCCATCTTCCCAGCCCACCATCCCCATCATGGGCATCGTTGCTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31270039|31270334 hsa-miR-22-5p 0 0 1
chr6:31270039|31270334 hsa-miR-22-3p 0 0 1
chr6:31270039|31270334 hsa-miR-198 0 1 1
chr6:31270039|31270334 hsa-miR-183-5p 0 0 1
chr6:31270039|31270334 hsa-miR-183-3p 0 0 1
chr6:31270039|31270334 hsa-miR-370-5p 0 0 1
chr6:31270039|31270334 hsa-miR-370-3p 0 0 1
chr6:31270039|31270334 hsa-miR-326 1 0 1
chr6:31270039|31270334 hsa-miR-448 0 0 1
chr6:31270039|31270334 hsa-miR-506-5p 0 0 1
chr6:31270039|31270334 hsa-miR-506-3p 0 0 1
chr6:31270039|31270334 hsa-miR-564 1 0 1
chr6:31270039|31270334 hsa-miR-1301-5p 0 0 1
chr6:31270039|31270334 hsa-miR-1301-3p 0 0 1
chr6:31270039|31270334 hsa-miR-765 1 1 1
chr6:31270039|31270334 hsa-miR-891a-5p 0 0 1
chr6:31270039|31270334 hsa-miR-891a-3p 0 0 1
chr6:31270039|31270334 hsa-miR-541-5p 0 0 1
chr6:31270039|31270334 hsa-miR-541-3p 0 0 1
chr6:31270039|31270334 hsa-miR-760 1 1 1
chr6:31270039|31270334 hsa-miR-1291 0 1 1
chr6:31270039|31270334 hsa-miR-1299 0 0 1
chr6:31270039|31270334 hsa-miR-1266-5p 0 0 1
chr6:31270039|31270334 hsa-miR-1266-3p 0 0 1
chr6:31270039|31270334 hsa-miR-941 0 1 1
chr6:31270039|31270334 hsa-miR-423-5p 0 1 1
chr6:31270039|31270334 hsa-miR-654-5p 0 1 1
chr6:31270039|31270334 hsa-miR-767-3p 0 0 1
chr6:31270039|31270334 hsa-miR-576-3p 0 0 1
chr6:31270039|31270334 hsa-miR-875-3p 0 0 1
chr6:31270039|31270334 hsa-miR-140-3p 0 0 1
chr6:31270039|31270334 hsa-miR-330-5p 1 0 1
chr6:31270039|31270334 hsa-miR-220b 0 0 1
chr6:31270039|31270334 hsa-miR-124 0 0 1
chr6:31270039|31270334 hsa-miR-516b 0 0 1
chr6:31270039|31270334 hsa-miR-608 1 1 0
chr6:31270039|31270334 hsa-miR-762 1 1 0
chr6:31270039|31270334 hsa-miR-1268a 1 0 0
chr6:31270039|31270334 hsa-miR-3153 0 1 0
chr6:31270039|31270334 hsa-miR-3161 0 1 0
chr6:31270039|31270334 hsa-miR-1193 0 1 0
chr6:31270039|31270334 hsa-miR-4298 1 1 0
chr6:31270039|31270334 hsa-miR-4314 0 1 0
chr6:31270039|31270334 hsa-miR-4253 1 0 0
chr6:31270039|31270334 hsa-miR-3943 1 0 0
chr6:31270039|31270334 hsa-miR-1268b 1 0 0
chr6:31270039|31270334 hsa-miR-4450 1 0 0
chr6:31270039|31270334 hsa-miR-4487 1 0 0
chr6:31270039|31270334 hsa-miR-4490 0 1 0
chr6:31270039|31270334 hsa-miR-4501 0 1 0
chr6:31270039|31270334 hsa-miR-2392 1 0 0
chr6:31270039|31270334 hsa-miR-4507 1 0 0
chr6:31270039|31270334 hsa-miR-4516 0 1 0
chr6:31270039|31270334 hsa-miR-1587 1 1 0
chr6:31270039|31270334 hsa-miR-4647 0 1 0
chr6:31270039|31270334 hsa-miR-4651 1 0 0
chr6:31270039|31270334 hsa-miR-4689 1 0 0
chr6:31270039|31270334 hsa-miR-4710 0 1 0
chr6:31270039|31270334 hsa-miR-4739 1 1 0
chr6:31270039|31270334 hsa-miR-4784 0 1 0
chr6:31270039|31270334 hsa-miR-6165 1 0 0
chr6:31270039|31270334 hsa-miR-8057 0 1 0
chr6:31270039|31270334 hsa-miR-8085 1 0 0
chr6:31270039|31270334 hsa-miR-8089 1 0 0
chr6:31270039|31270334 hsa-miR-12118 0 1 0
chr6:31270039|31270334 hsa-miR-4433b-3p 1 0 0
chr6:31270039|31270334 hsa-miR-6734-5p 1 0 0
chr6:31270039|31270334 hsa-miR-7106-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6894-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6857-5p 0 1 0
chr6:31270039|31270334 hsa-miR-6822-3p 1 0 0
chr6:31270039|31270334 hsa-miR-6854-5p 0 1 0
chr6:31270039|31270334 hsa-miR-6728-5p 1 0 0
chr6:31270039|31270334 hsa-miR-766-5p 1 0 0
chr6:31270039|31270334 hsa-miR-3192-5p 0 1 0
chr6:31270039|31270334 hsa-miR-6757-5p 1 0 0
chr6:31270039|31270334 hsa-miR-7847-3p 1 0 0
chr6:31270039|31270334 hsa-miR-6746-5p 1 0 0
chr6:31270039|31270334 hsa-miR-593-5p 1 1 0
chr6:31270039|31270334 hsa-miR-8069 1 0 0
chr6:31270039|31270334 hsa-miR-6845-3p 1 0 0
chr6:31270039|31270334 hsa-miR-6783-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6716-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6829-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6732-5p 1 0 0
chr6:31270039|31270334 hsa-miR-2467-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6782-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6728-3p 0 1 0
chr6:31270039|31270334 hsa-miR-3150b-3p 0 1 0
chr6:31270039|31270334 hsa-miR-7855-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6882-3p 1 0 0
chr6:31270039|31270334 hsa-miR-3934-3p 0 1 0
chr6:31270039|31270334 hsa-miR-7109-3p 0 1 0
chr6:31270039|31270334 hsa-miR-6786-5p 1 0 0
chr6:31270039|31270334 hsa-miR-5088-5p 0 1 0
chr6:31270039|31270334 hsa-miR-6740-5p 1 0 0
chr6:31270039|31270334 hsa-miR-204-3p 0 1 0
chr6:31270039|31270334 hsa-miR-296-3p 1 0 0
chr6:31270039|31270334 hsa-miR-4787-5p 1 0 0
chr6:31270039|31270334 hsa-miR-4667-3p 0 1 0
chr6:31270039|31270334 hsa-miR-4640-3p 1 0 0
chr6:31270039|31270334 hsa-miR-7156-3p 0 1 0
chr6:31270039|31270334 hsa-miR-6769a-3p 1 1 0
chr6:31270039|31270334 hsa-miR-2115-5p 1 0 0
chr6:31270039|31270334 hsa-miR-345-5p 1 0 0
chr6:31270039|31270334 hsa-miR-525-5p 0 1 0
chr6:31270039|31270334 hsa-miR-4732-3p 0 1 0
chr6:31270039|31270334 hsa-miR-6828-3p 0 1 0
chr6:31270039|31270334 hsa-miR-6887-3p 1 1 0
chr6:31270039|31270334 hsa-miR-4762-3p 0 1 0
chr6:31270039|31270334 hsa-miR-6758-3p 0 1 0
chr6:31270039|31270334 hsa-miR-605-3p 0 1 0
chr6:31270039|31270334 hsa-miR-6826-3p 0 1 0
chr6:31270039|31270334 hsa-miR-4749-3p 1 1 0
chr6:31270039|31270334 hsa-miR-6859-3p 1 1 0
chr6:31270039|31270334 hsa-miR-4750-3p 0 1 0
chr6:31270039|31270334 hsa-miR-6798-3p 1 1 0
chr6:31270039|31270334 hsa-miR-6731-3p 1 1 0
chr6:31270039|31270334 hsa-miR-431-5p 0 1 0
chr6:31270039|31270334 hsa-miR-4652-3p 1 0 0
chr6:31270039|31270334 hsa-miR-652-3p 1 0 0
chr6:31270039|31270334 hsa-miR-6808-3p 1 1 0
chr6:31270039|31270334 hsa-miR-124-3p 0 1 0
chr6:31270039|31270334 hsa-miR-1207-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6769b-5p 1 1 0
chr6:31270039|31270334 hsa-miR-6865-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6870-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6737-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6743-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6752-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6756-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6769a-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6803-5p 1 1 0
chr6:31270039|31270334 hsa-miR-6819-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6851-5p 1 0 0
chr6:31270039|31270334 hsa-miR-7110-5p 1 0 0
chr6:31270039|31270334 hsa-miR-11181-3p 1 1 0
chr6:31270039|31270334 hsa-miR-6751-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6763-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6797-5p 1 0 0
chr6:31270039|31270334 hsa-miR-7111-5p 1 0 0
chr6:31270039|31270334 hsa-miR-3127-3p 1 0 0
chr6:31270039|31270334 hsa-miR-4685-3p 1 0 0
chr6:31270039|31270334 hsa-miR-3620-5p 1 1 0
chr6:31270039|31270334 hsa-miR-5196-5p 1 1 0
chr6:31270039|31270334 hsa-miR-6780b-5p 1 0 0
chr6:31270039|31270334 hsa-miR-10526-3p 0 1 0
chr6:31270039|31270334 hsa-miR-4649-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6794-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6848-5p 1 0 0
chr6:31270039|31270334 hsa-miR-939-5p 1 0 0
chr6:31270039|31270334 hsa-miR-3085-5p 1 0 0
chr6:31270039|31270334 hsa-miR-3940-5p 1 0 0
chr6:31270039|31270334 hsa-miR-3173-3p 0 1 0
chr6:31270039|31270334 hsa-miR-4646-5p 1 1 0
chr6:31270039|31270334 hsa-miR-4747-5p 1 0 0
chr6:31270039|31270334 hsa-miR-6891-5p 1 1 0
chr6:31270039|31270334 hsa-miR-4667-5p 0 1 0
chr6:31270039|31270334 hsa-miR-3184-5p 0 1 0
chr6:31270039|31270334 hsa-miR-520a-5p 0 1 0
chr6:31270039|31270334 hsa-miR-6775-3p 0 1 0
chr6:31270039|31270334 hsa-miR-9851-3p 0 1 0
chr6:31270039|31270334 hsa-miR-3059-5p 1 1 0
chr6:31270039|31270334 hsa-miR-7114-3p 1 0 0
chr6:31270039|31270334 hsa-miR-6502-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:31270039|31270334
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MGVRAPHLLLLSQSHLPSPPSPSWASLL
Nucleotide Sequence TTGGGGGTCAGGGCCCCTCACCTTCTCCTCCTTTCCCAGAGCCATCTTCCCAGCCCACCATCCCCATCATGGGCATCGTTGCTG
CircID chr6:31270039|31270334
ORF Type ORF2
Protein Length 71
Nucleotide Length 213
Protein Sequence MQHEGLQEPLTLSWGKEGNGGSHLLSEKAEVLLEPFSRVRAEAWGSGPLTFSSFPRAIFPAHHPHHGHRCW
Nucleotide Sequence ATGCAGCACGAGGGGCTGCAAGAGCCCCTCACCCTGAGCTGGGGTAAGGAGGGGAATGGGGGGTCACATCTCTTATCAGAGAAAGCAGAAGTCCTTCTGGAGCCCTTCAGCCGGGTCAGGGCTGAGGCTTGGGGGTCAGGGCCCCTCACCTTCTCCTCCTTTCCCAGAGCCATCTTCCCAGCCCACCATCCCCATCATGGGCATCGTTGCTGG
CircID chr6:31270039|31270334
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MEPSRSGQLWWCLLDKSRDTRAICSTRGCKSPSP
Nucleotide Sequence ATGGAACCTTCCAGAAGTGGGCAGCTGTGGTGGTGCCTTCTGGACAAGAGCAGAGATACACGTGCCATATGCAGCACGAGGGGCTGCAAGAGCCCCTCACCCTGA
CircID chr6:31270039|31270334
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence MGGHISYQRKQKSFWSPSAGSGLRLGGQGPSPSPPFPEPSSQPTIPIMGIVAG
Nucleotide Sequence ATGGGGGGTCACATCTCTTATCAGAGAAAGCAGAAGTCCTTCTGGAGCCCTTCAGCCGGGTCAGGGCTGAGGCTTGGGGGTCAGGGCCCCTCACCTTCTCCTCCTTTCCCAGAGCCATCTTCCCAGCCCACCATCCCCATCATGGGCATCGTTGCTGGC
CircID chr6:31270039|31270334
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MQPLVLHMARVSLLLSRRHHHSCPLLEGSISCWP
Nucleotide Sequence TTGCAGCCCCTCGTGCTGCATATGGCACGTGTATCTCTGCTCTTGTCCAGAAGGCACCACCACAGCTGCCCACTTCTGGAAGGTTCCATCTCCTGCTGGCCT
CircID chr6:31270039|31270334
ORF Type ORF6
Protein Length 85
Nucleotide Length 255
Protein Sequence MALGKEEKVRGPDPQASALTRLKGSRRTSAFSDKRCDPPFPSLPQLRVRGSCSPSCCIWHVYLCSCPEGTTTAAHFWKVPSPAGL
Nucleotide Sequence ATGGCTCTGGGAAAGGAGGAGAAGGTGAGGGGCCCTGACCCCCAAGCCTCAGCCCTGACCCGGCTGAAGGGCTCCAGAAGGACTTCTGCTTTCTCTGATAAGAGATGTGACCCCCCATTCCCCTCCTTACCCCAGCTCAGGGTGAGGGGCTCTTGCAGCCCCTCGTGCTGCATATGGCACGTGTATCTCTGCTCTTGTCCAGAAGGCACCACCACAGCTGCCCACTTCTGGAAGGTTCCATCTCCTGCTGGCCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab