CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31635187|31635444
Strand -
CircType exon
Host Gene ENSG00000204469.11;
Algorism CIRI2;
Sequence AGCGTACAGACCGAGGCACAGAGCCTGGCCCCATTCGGCCATCCCATCGACCTGGTCCCCCAGTCCAGTTTGGCACTAGTGACAAGGTCTGTGTGGGCTGGATCTGGGTATCCTGAGTTGGGTGGAGAGAAGGGAAGGACTAAAGGTGGGACATAGAGGACACATGTCTGTCACGGGACAATGTCTCCTGCCTTCTTGTGATCACAGGACTCAGACTTACGCCTAGTGGTAGGAGACAGCTTGAAAGCAGAGAAGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31635187|31635444 hsa-miR-204-5p 0 0 1
chr6:31635187|31635444 hsa-miR-204-3p 0 0 1
chr6:31635187|31635444 hsa-miR-211-5p 0 0 1
chr6:31635187|31635444 hsa-miR-211-3p 0 0 1
chr6:31635187|31635444 hsa-miR-422a 0 0 1
chr6:31635187|31635444 hsa-miR-484 0 0 1
chr6:31635187|31635444 hsa-miR-498-5p 0 0 1
chr6:31635187|31635444 hsa-miR-498-3p 0 0 1
chr6:31635187|31635444 hsa-miR-519e-5p 0 0 1
chr6:31635187|31635444 hsa-miR-519e-3p 0 0 1
chr6:31635187|31635444 hsa-miR-510-5p 0 0 1
chr6:31635187|31635444 hsa-miR-510-3p 0 0 1
chr6:31635187|31635444 hsa-miR-623 0 0 1
chr6:31635187|31635444 hsa-miR-625-5p 0 0 1
chr6:31635187|31635444 hsa-miR-625-3p 0 0 1
chr6:31635187|31635444 hsa-miR-626 0 0 1
chr6:31635187|31635444 hsa-miR-637 0 0 1
chr6:31635187|31635444 hsa-miR-1264 0 0 1
chr6:31635187|31635444 hsa-miR-668-5p 0 0 1
chr6:31635187|31635444 hsa-miR-668-3p 0 0 1
chr6:31635187|31635444 hsa-miR-760 0 0 1
chr6:31635187|31635444 hsa-miR-940 0 0 1
chr6:31635187|31635444 hsa-miR-942-5p 0 0 1
chr6:31635187|31635444 hsa-miR-942-3p 0 0 1
chr6:31635187|31635444 hsa-miR-1237-5p 0 0 1
chr6:31635187|31635444 hsa-miR-1237-3p 0 0 1
chr6:31635187|31635444 hsa-miR-1248 0 0 1
chr6:31635187|31635444 hsa-miR-1275 0 0 1
chr6:31635187|31635444 hsa-miR-1288-5p 0 0 1
chr6:31635187|31635444 hsa-miR-1288-3p 0 0 1
chr6:31635187|31635444 hsa-miR-513b-5p 0 0 1
chr6:31635187|31635444 hsa-miR-513b-3p 0 0 1
chr6:31635187|31635444 hsa-miR-1224-3p 0 0 1
chr6:31635187|31635444 hsa-miR-515-3p 0 0 1
chr6:31635187|31635444 hsa-miR-542-3p 0 0 1
chr6:31635187|31635444 hsa-miR-1260 0 0 1
chr6:31635187|31635444 hsa-miR-1280 0 0 1
chr6:31635187|31635444 hsa-miR-550 0 0 1
chr6:31635187|31635444 hsa-miR-378 0 0 1
chr6:31635187|31635444 hsa-miR-1269 0 0 1
chr6:31635187|31635444 hsa-miR-371-3p 0 0 1
chr6:31635187|31635444 hsa-miR-608 1 0 0
chr6:31635187|31635444 hsa-miR-638 1 0 0
chr6:31635187|31635444 hsa-miR-762 1 0 0
chr6:31635187|31635444 hsa-miR-4488 1 0 0
chr6:31635187|31635444 hsa-miR-4651 1 0 0
chr6:31635187|31635444 hsa-miR-4656 1 0 0
chr6:31635187|31635444 hsa-miR-4673 1 0 0
chr6:31635187|31635444 hsa-miR-205-5p 1 0 0
chr6:31635187|31635444 hsa-miR-1227-5p 1 0 0
chr6:31635187|31635444 hsa-miR-6757-5p 1 0 0
chr6:31635187|31635444 hsa-miR-877-3p 1 0 0
chr6:31635187|31635444 hsa-miR-6740-3p 1 0 0
chr6:31635187|31635444 hsa-miR-6786-5p 1 0 0
chr6:31635187|31635444 hsa-miR-6809-3p 1 0 0
chr6:31635187|31635444 hsa-miR-4743-5p 1 0 0
chr6:31635187|31635444 hsa-miR-6886-3p 1 0 0
chr6:31635187|31635444 hsa-miR-5584-3p 1 0 0
chr6:31635187|31635444 hsa-miR-6734-3p 1 0 0
chr6:31635187|31635444 hsa-miR-6803-5p 1 0 0
chr6:31635187|31635444 hsa-miR-3620-5p 1 0 0
chr6:31635187|31635444 hsa-miR-328-5p 1 0 0
chr6:31635187|31635444 hsa-miR-6862-3p 1 0 0
chr6:31635187|31635444 hsa-miR-6769b-3p 1 0 0
chr6:31635187|31635444 hsa-miR-7114-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:31635187|31635444
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MAPFGHPIDLVPQSSLALVTRSVWAGSGYPELGGEKGRTKGGT
Nucleotide Sequence CTGGCCCCATTCGGCCATCCCATCGACCTGGTCCCCCAGTCCAGTTTGGCACTAGTGACAAGGTCTGTGTGGGCTGGATCTGGGTATCCTGAGTTGGGTGGAGAGAAGGGAAGGACTAAAGGTGGGACATAG
CircID chr6:31635187|31635444
ORF Type ORF2
Protein Length 45
Nucleotide Length 138
Protein Sequence MCGLDLGILSWVERREGLKVGHRGHMSVTGQCLLPSCDHRTQTYA
Nucleotide Sequence CTGTGTGGGCTGGATCTGGGTATCCTGAGTTGGGTGGAGAGAAGGGAAGGACTAAAGGTGGGACATAGAGGACACATGTCTGTCACGGGACAATGTCTCCTGCCTTCTTGTGATCACAGGACTCAGACTTACGCCTAG
CircID chr6:31635187|31635444
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MSRDNVSCLLVITGLRLTPSGRRQLESREG
Nucleotide Sequence CTGTCACGGGACAATGTCTCCTGCCTTCTTGTGATCACAGGACTCAGACTTACGCCTAGTGGTAGGAGACAGCTTGAAAGCAGAGAAGGA
CircID chr6:31635187|31635444
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MCPLCPTFSPSLLSTQLRIPRSSPHRPCH
Nucleotide Sequence ATGTGTCCTCTATGTCCCACCTTTAGTCCTTCCCTTCTCTCCACCCAACTCAGGATACCCAGATCCAGCCCACACAGACCTTGTCACTAG
CircID chr6:31635187|31635444
ORF Type ORF5
Protein Length 36
Nucleotide Length 111
Protein Sequence MLSSCLLPLGVSLSPVITRRQETLSRDRHVSSMSHL
Nucleotide Sequence CTGCTTTCAAGCTGTCTCCTACCACTAGGCGTAAGTCTGAGTCCTGTGATCACAAGAAGGCAGGAGACATTGTCCCGTGACAGACATGTGTCCTCTATGTCCCACCTTTAG
CircID chr6:31635187|31635444
ORF Type ORF6
Protein Length 28
Nucleotide Length 84
Protein Sequence MSLVPNWTGGPGRWDGRMGPGSVPRSVR
Nucleotide Sequence TTGTCACTAGTGCCAAACTGGACTGGGGGACCAGGTCGATGGGATGGCCGAATGGGGCCAGGCTCTGTGCCTCGGTCTGTACGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab