CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31642829|31643060
Strand -
CircType exon
Host Gene ENSG00000204463.11;
Algorism CIRI2;
Sequence CTGCAAGAAGTCAGTCATGCCTTGGAGAAAGGCAGGGACACCAGGCATCGCCACAGTGATGGTGGGAGAAGCCACACCAGACCCTCCAGCCCCTGGCCCTGCAGGCCCTAGCAGGTTCCCCAGAAGCTGAGAGAACTGAAGATCAGCCATGGAGGGTTGAGGGGTGGGTGGAGGCTGGGCAGGCCCCCCAGGAGCGGGGCCAGCTGTGGTAGCTGTGTTGGTGGTGCCAGCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31642829|31643060 hsa-miR-150-5p 0 0 1
chr6:31642829|31643060 hsa-miR-150-3p 0 0 1
chr6:31642829|31643060 hsa-miR-617 0 0 1
chr6:31642829|31643060 hsa-miR-637 1 1 1
chr6:31642829|31643060 hsa-miR-661 0 0 1
chr6:31642829|31643060 hsa-miR-1296-5p 0 0 1
chr6:31642829|31643060 hsa-miR-1296-3p 0 0 1
chr6:31642829|31643060 hsa-miR-1182 0 1 1
chr6:31642829|31643060 hsa-miR-1205 0 0 1
chr6:31642829|31643060 hsa-miR-1208 0 0 1
chr6:31642829|31643060 hsa-miR-532-3p 0 0 1
chr6:31642829|31643060 hsa-miR-1224-3p 0 0 1
chr6:31642829|31643060 hsa-miR-1207-3p 0 1 1
chr6:31642829|31643060 hsa-miR-140-3p 0 0 1
chr6:31642829|31643060 hsa-miR-515-5p 0 0 1
chr6:31642829|31643060 hsa-miR-220b 0 0 1
chr6:31642829|31643060 hsa-miR-1260 0 0 1
chr6:31642829|31643060 hsa-miR-1280 0 0 1
chr6:31642829|31643060 hsa-miR-644 0 0 1
chr6:31642829|31643060 hsa-miR-1254 0 0 1
chr6:31642829|31643060 hsa-miR-346 1 0 0
chr6:31642829|31643060 hsa-miR-636 1 0 0
chr6:31642829|31643060 hsa-miR-644a 0 1 0
chr6:31642829|31643060 hsa-miR-2861 0 1 0
chr6:31642829|31643060 hsa-miR-3652 0 1 0
chr6:31642829|31643060 hsa-miR-3918 0 1 0
chr6:31642829|31643060 hsa-miR-4439 0 1 0
chr6:31642829|31643060 hsa-miR-3135b 0 1 0
chr6:31642829|31643060 hsa-miR-4498 0 1 0
chr6:31642829|31643060 hsa-miR-4634 1 0 0
chr6:31642829|31643060 hsa-miR-4686 0 1 0
chr6:31642829|31643060 hsa-miR-4767 1 0 0
chr6:31642829|31643060 hsa-miR-5690 0 1 0
chr6:31642829|31643060 hsa-miR-6069 1 1 0
chr6:31642829|31643060 hsa-miR-6085 0 1 0
chr6:31642829|31643060 hsa-miR-6132 0 1 0
chr6:31642829|31643060 hsa-miR-7978 0 1 0
chr6:31642829|31643060 hsa-miR-8089 1 1 0
chr6:31642829|31643060 hsa-miR-12133 0 1 0
chr6:31642829|31643060 hsa-miR-6747-3p 0 1 0
chr6:31642829|31643060 hsa-miR-6857-5p 1 0 0
chr6:31642829|31643060 hsa-miR-6515-5p 0 1 0
chr6:31642829|31643060 hsa-miR-593-5p 1 1 0
chr6:31642829|31643060 hsa-miR-6849-3p 0 1 0
chr6:31642829|31643060 hsa-miR-6787-3p 0 1 0
chr6:31642829|31643060 hsa-miR-1915-5p 0 1 0
chr6:31642829|31643060 hsa-miR-6850-5p 1 0 0
chr6:31642829|31643060 hsa-miR-4713-5p 0 1 0
chr6:31642829|31643060 hsa-miR-6815-3p 0 1 0
chr6:31642829|31643060 hsa-miR-7109-3p 0 1 0
chr6:31642829|31643060 hsa-miR-1343-3p 0 1 0
chr6:31642829|31643060 hsa-miR-4763-5p 1 1 0
chr6:31642829|31643060 hsa-miR-6763-3p 1 0 0
chr6:31642829|31643060 hsa-miR-4640-5p 1 1 0
chr6:31642829|31643060 hsa-miR-5001-3p 0 1 0
chr6:31642829|31643060 hsa-miR-296-3p 1 0 0
chr6:31642829|31643060 hsa-miR-6749-5p 1 1 0
chr6:31642829|31643060 hsa-miR-6717-5p 0 1 0
chr6:31642829|31643060 hsa-miR-6895-5p 0 1 0
chr6:31642829|31643060 hsa-miR-4763-3p 1 1 0
chr6:31642829|31643060 hsa-miR-1343-5p 1 0 0
chr6:31642829|31643060 hsa-miR-6726-5p 1 0 0
chr6:31642829|31643060 hsa-miR-6813-5p 0 1 0
chr6:31642829|31643060 hsa-miR-6780b-5p 1 0 0
chr6:31642829|31643060 hsa-miR-6836-5p 0 1 0
chr6:31642829|31643060 hsa-miR-4726-5p 0 1 0
chr6:31642829|31643060 hsa-miR-6883-5p 0 1 0
chr6:31642829|31643060 hsa-miR-6885-5p 1 1 0
chr6:31642829|31643060 hsa-miR-939-5p 1 0 0
chr6:31642829|31643060 hsa-miR-6822-5p 1 1 0
chr6:31642829|31643060 hsa-miR-9851-5p 0 1 0
chr6:31642829|31643060 hsa-miR-6862-3p 1 0 0
chr6:31642829|31643060 hsa-miR-6805-3p 1 0 0
chr6:31642829|31643060 hsa-miR-10392-3p 1 0 0
chr6:31642829|31643060 hsa-miR-6819-3p 0 1 0
chr6:31642829|31643060 hsa-miR-7114-3p 0 1 0
chr6:31642829|31643060 hsa-miR-10394-5p 0 1 0
chr6:31642829|31643060 hsa-miR-4691-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:31642829|31643060
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence LQEVSHALEKGRDTRHRHSDGGRSHTRPSSPWPCRP
Nucleotide Sequence CTGCAAGAAGTCAGTCATGCCTTGGAGAAAGGCAGGGACACCAGGCATCGCCACAGTGATGGTGGGAGAAGCCACACCAGACCCTCCAGCCCCTGGCCCTGCAGGCCCTAG
CircID chr6:31642829|31643060
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MRELKISHGGLRGGWRLGRPPRSGASCGSCVGGAS
Nucleotide Sequence CTGAGAGAACTGAAGATCAGCCATGGAGGGTTGAGGGGTGGGTGGAGGCTGGGCAGGCCCCCCAGGAGCGGGGCCAGCTGTGGTAGCTGTGTTGGTGGTGCCAGC
CircID chr6:31642829|31643060
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MPWRKAGTPGIATVMVGEATPDPPAPGPAGPSRFPRS
Nucleotide Sequence ATGCCTTGGAGAAAGGCAGGGACACCAGGCATCGCCACAGTGATGGTGGGAGAAGCCACACCAGACCCTCCAGCCCCTGGCCCTGCAGGCCCTAGCAGGTTCCCCAGAAGCTGA
CircID chr6:31642829|31643060
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MALQALAGSPEAERTEDQPWRVEGWVEAGQAPQERGQLW
Nucleotide Sequence CTGGCCCTGCAGGCCCTAGCAGGTTCCCCAGAAGCTGAGAGAACTGAAGATCAGCCATGGAGGGTTGAGGGGTGGGTGGAGGCTGGGCAGGCCCCCCAGGAGCGGGGCCAGCTGTGGTAG
CircID chr6:31642829|31643060
ORF Type ORF5
Protein Length 50
Nucleotide Length 150
Protein Sequence MADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAMPGVPAFLQGMTDFLQ
Nucleotide Sequence ATGGCTGATCTTCAGTTCTCTCAGCTTCTGGGGAACCTGCTAGGGCCTGCAGGGCCAGGGGCTGGAGGGTCTGGTGTGGCTTCTCCCACCATCACTGTGGCGATGCCTGGTGTCCCTGCCTTTCTCCAAGGCATGACTGACTTCTTGCAG
CircID chr6:31642829|31643060
ORF Type ORF6
Protein Length 40
Nucleotide Length 123
Protein Sequence LAPPTQLPQLAPLLGGLPSLHPPLNPPWLIFSSLSFWGTC
Nucleotide Sequence CTGGCACCACCAACACAGCTACCACAGCTGGCCCCGCTCCTGGGGGGCCTGCCCAGCCTCCACCCACCCCTCAACCCTCCATGGCTGATCTTCAGTTCTCTCAGCTTCTGGGGAACCTGCTAG
CircID chr6:31642829|31643060
ORF Type ORF7
Protein Length 29
Nucleotide Length 90
Protein Sequence MQGQGLEGLVWLLPPSLWRCLVSLPFSKA
Nucleotide Sequence CTGCAGGGCCAGGGGCTGGAGGGTCTGGTGTGGCTTCTCCCACCATCACTGTGGCGATGCCTGGTGTCCCTGCCTTTCTCCAAGGCATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab