CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31687642|31687878
Strand -
CircType exon
Host Gene ENSG00000204427.10;
Algorism CIRI2;
Sequence CCACGCTCCAGGGGAAGTCGGGCCCGTGTTCTGCCTGGTAGGAGCGGAGGACAGACAGACACCAGTCCTCTTCCACCTCCCATCGGCTATAAATTGAGGCTGGTCAGGGAGAGAGATGACAGCCAGTCAGCAACCTGACCTTGCTGGGCCCCCGCCCCAAGCCTCACTGGATCCCTTCTCACCTTCCTCCAGCTGTGAGGAGGCCTCCAACCACTGCCTCACCACTCGAAGACCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31687642|31687878 hsa-miR-34a-5p 0 0 1
chr6:31687642|31687878 hsa-miR-34a-3p 0 0 1
chr6:31687642|31687878 hsa-miR-449a 0 0 1
chr6:31687642|31687878 hsa-miR-572 0 0 1
chr6:31687642|31687878 hsa-miR-602 0 1 1
chr6:31687642|31687878 hsa-miR-617 0 1 1
chr6:31687642|31687878 hsa-miR-650 0 0 1
chr6:31687642|31687878 hsa-miR-449b-5p 0 0 1
chr6:31687642|31687878 hsa-miR-449b-3p 0 0 1
chr6:31687642|31687878 hsa-miR-765 0 0 1
chr6:31687642|31687878 hsa-miR-892b 0 0 1
chr6:31687642|31687878 hsa-miR-1182 1 1 1
chr6:31687642|31687878 hsa-miR-1253 0 0 1
chr6:31687642|31687878 hsa-miR-1825 0 0 1
chr6:31687642|31687878 hsa-miR-1827 0 1 1
chr6:31687642|31687878 hsa-miR-140-5p 0 0 1
chr6:31687642|31687878 hsa-miR-485-5p 0 0 1
chr6:31687642|31687878 hsa-miR-193a-5p 1 1 1
chr6:31687642|31687878 hsa-miR-199a-5p 0 0 1
chr6:31687642|31687878 hsa-miR-1207-3p 0 0 1
chr6:31687642|31687878 hsa-miR-331-3p 0 0 1
chr6:31687642|31687878 hsa-miR-628-5p 0 0 1
chr6:31687642|31687878 hsa-miR-199b-5p 0 0 1
chr6:31687642|31687878 hsa-miR-125a-5p 0 0 1
chr6:31687642|31687878 hsa-miR-34c-5p 0 0 1
chr6:31687642|31687878 hsa-miR-125b 0 0 1
chr6:31687642|31687878 hsa-miR-7 0 0 1
chr6:31687642|31687878 hsa-miR-1300 0 0 1
chr6:31687642|31687878 hsa-miR-768-5p 0 0 1
chr6:31687642|31687878 hsa-miR-663 0 0 1
chr6:31687642|31687878 hsa-miR-608 1 0 0
chr6:31687642|31687878 hsa-miR-638 1 0 0
chr6:31687642|31687878 hsa-miR-663a 0 1 0
chr6:31687642|31687878 hsa-miR-762 1 0 0
chr6:31687642|31687878 hsa-miR-940 1 0 0
chr6:31687642|31687878 hsa-miR-1268a 1 0 0
chr6:31687642|31687878 hsa-miR-2861 1 0 0
chr6:31687642|31687878 hsa-miR-3131 1 0 0
chr6:31687642|31687878 hsa-miR-3154 0 1 0
chr6:31687642|31687878 hsa-miR-3188 0 1 0
chr6:31687642|31687878 hsa-miR-4316 0 1 0
chr6:31687642|31687878 hsa-miR-4260 0 1 0
chr6:31687642|31687878 hsa-miR-1268b 1 0 0
chr6:31687642|31687878 hsa-miR-3135b 0 1 0
chr6:31687642|31687878 hsa-miR-3689c 0 1 0
chr6:31687642|31687878 hsa-miR-4488 1 0 0
chr6:31687642|31687878 hsa-miR-4514 0 1 0
chr6:31687642|31687878 hsa-miR-4516 1 0 0
chr6:31687642|31687878 hsa-miR-4651 1 0 0
chr6:31687642|31687878 hsa-miR-4673 1 1 0
chr6:31687642|31687878 hsa-miR-4689 1 0 0
chr6:31687642|31687878 hsa-miR-4710 0 1 0
chr6:31687642|31687878 hsa-miR-4739 1 1 0
chr6:31687642|31687878 hsa-miR-5787 1 0 0
chr6:31687642|31687878 hsa-miR-6068 1 0 0
chr6:31687642|31687878 hsa-miR-6127 1 0 0
chr6:31687642|31687878 hsa-miR-6745 1 1 0
chr6:31687642|31687878 hsa-miR-7974 1 0 0
chr6:31687642|31687878 hsa-miR-9718 0 1 0
chr6:31687642|31687878 hsa-miR-629-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6765-5p 1 1 0
chr6:31687642|31687878 hsa-miR-215-3p 0 1 0
chr6:31687642|31687878 hsa-miR-6894-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6799-5p 1 1 0
chr6:31687642|31687878 hsa-miR-4709-3p 1 1 0
chr6:31687642|31687878 hsa-miR-4722-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6873-3p 0 1 0
chr6:31687642|31687878 hsa-miR-4728-3p 1 0 0
chr6:31687642|31687878 hsa-miR-7110-3p 0 1 0
chr6:31687642|31687878 hsa-miR-6742-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6871-5p 0 1 0
chr6:31687642|31687878 hsa-miR-3180-3p 0 1 0
chr6:31687642|31687878 hsa-miR-6748-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6798-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6782-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6821-5p 1 0 0
chr6:31687642|31687878 hsa-miR-30b-3p 0 1 0
chr6:31687642|31687878 hsa-miR-6850-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6740-3p 1 0 0
chr6:31687642|31687878 hsa-miR-6786-5p 1 0 0
chr6:31687642|31687878 hsa-miR-1229-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6753-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6757-3p 1 0 0
chr6:31687642|31687878 hsa-miR-7113-3p 0 1 0
chr6:31687642|31687878 hsa-miR-1228-5p 1 0 0
chr6:31687642|31687878 hsa-miR-296-3p 1 0 0
chr6:31687642|31687878 hsa-miR-4650-3p 1 1 0
chr6:31687642|31687878 hsa-miR-4783-5p 1 0 0
chr6:31687642|31687878 hsa-miR-4713-3p 0 1 0
chr6:31687642|31687878 hsa-miR-6749-5p 1 0 0
chr6:31687642|31687878 hsa-miR-149-3p 1 0 0
chr6:31687642|31687878 hsa-miR-6781-5p 1 0 0
chr6:31687642|31687878 hsa-miR-7112-5p 1 0 0
chr6:31687642|31687878 hsa-miR-3120-5p 0 1 0
chr6:31687642|31687878 hsa-miR-4732-3p 0 1 0
chr6:31687642|31687878 hsa-miR-6867-3p 0 1 0
chr6:31687642|31687878 hsa-miR-6755-3p 0 1 0
chr6:31687642|31687878 hsa-miR-4283 0 1 0
chr6:31687642|31687878 hsa-miR-29c-5p 1 0 0
chr6:31687642|31687878 hsa-miR-589-3p 0 1 0
chr6:31687642|31687878 hsa-miR-1207-5p 1 0 0
chr6:31687642|31687878 hsa-miR-1273h-5p 0 1 0
chr6:31687642|31687878 hsa-miR-3689b-3p 0 1 0
chr6:31687642|31687878 hsa-miR-4763-3p 1 0 0
chr6:31687642|31687878 hsa-miR-6769b-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6787-5p 1 1 0
chr6:31687642|31687878 hsa-miR-6816-5p 1 1 0
chr6:31687642|31687878 hsa-miR-5001-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6737-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6743-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6756-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6803-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6819-5p 1 1 0
chr6:31687642|31687878 hsa-miR-6851-5p 1 1 0
chr6:31687642|31687878 hsa-miR-11181-3p 1 0 0
chr6:31687642|31687878 hsa-miR-1249-5p 1 1 0
chr6:31687642|31687878 hsa-miR-6751-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6779-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6780a-5p 1 1 0
chr6:31687642|31687878 hsa-miR-6788-5p 0 1 0
chr6:31687642|31687878 hsa-miR-6797-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6852-3p 0 1 0
chr6:31687642|31687878 hsa-miR-3620-5p 1 0 0
chr6:31687642|31687878 hsa-miR-4728-5p 1 0 0
chr6:31687642|31687878 hsa-miR-5196-5p 1 1 0
chr6:31687642|31687878 hsa-miR-6780b-5p 1 1 0
chr6:31687642|31687878 hsa-miR-1237-5p 1 0 0
chr6:31687642|31687878 hsa-miR-3689a-3p 0 1 0
chr6:31687642|31687878 hsa-miR-4649-5p 1 0 0
chr6:31687642|31687878 hsa-miR-4725-3p 1 0 0
chr6:31687642|31687878 hsa-miR-4726-5p 1 0 0
chr6:31687642|31687878 hsa-miR-4745-3p 1 0 0
chr6:31687642|31687878 hsa-miR-4745-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6858-5p 1 0 0
chr6:31687642|31687878 hsa-miR-1238-5p 1 0 0
chr6:31687642|31687878 hsa-miR-4758-5p 1 1 0
chr6:31687642|31687878 hsa-miR-6511a-5p 1 1 0
chr6:31687642|31687878 hsa-miR-30c-1-3p 0 1 0
chr6:31687642|31687878 hsa-miR-6876-5p 0 1 0
chr6:31687642|31687878 hsa-miR-6724-5p 1 0 0
chr6:31687642|31687878 hsa-miR-6753-3p 1 0 0
chr6:31687642|31687878 hsa-miR-7107-3p 0 1 0
chr6:31687642|31687878 hsa-miR-3085-3p 0 1 0
chr6:31687642|31687878 hsa-miR-6876-3p 0 1 0
chr6:31687642|31687878 hsa-miR-5699-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:31687642|31687878
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MPGRSGGQTDTSPLPPPIGYKLRLVRERDDSQSAT
Nucleotide Sequence CTGCCTGGTAGGAGCGGAGGACAGACAGACACCAGTCCTCTTCCACCTCCCATCGGCTATAAATTGAGGCTGGTCAGGGAGAGAGATGACAGCCAGTCAGCAACCTGA
CircID chr6:31687642|31687878
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MTASQQPDLAGPPPQASLDPFSPSSSCEEASNHCLTTRRP
Nucleotide Sequence ATGACAGCCAGTCAGCAACCTGACCTTGCTGGGCCCCCGCCCCAAGCCTCACTGGATCCCTTCTCACCTTCCTCCAGCTGTGAGGAGGCCTCCAACCACTGCCTCACCACTCGAAGACCC
CircID chr6:31687642|31687878
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MTLLGPRPKPHWIPSHLPPAVRRPPTTASPLEDP
Nucleotide Sequence CTGACCTTGCTGGGCCCCCGCCCCAAGCCTCACTGGATCCCTTCTCACCTTCCTCCAGCTGTGAGGAGGCCTCCAACCACTGCCTCACCACTCGAAGACCCT
CircID chr6:31687642|31687878
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MEASSQLEEGEKGSSEAWGGGPARSGC
Nucleotide Sequence TTGGAGGCCTCCTCACAGCTGGAGGAAGGTGAGAAGGGATCCAGTGAGGCTTGGGGCGGGGGCCCAGCAAGGTCAGGTTGCTGA
CircID chr6:31687642|31687878
ORF Type ORF5
Protein Length 42
Nucleotide Length 126
Protein Sequence MAVISLPDQPQFIADGRWKRTGVCLSSAPTRQNTGPTSPGAW
Nucleotide Sequence CTGGCTGTCATCTCTCTCCCTGACCAGCCTCAATTTATAGCCGATGGGAGGTGGAAGAGGACTGGTGTCTGTCTGTCCTCCGCTCCTACCAGGCAGAACACGGGCCCGACTTCCCCTGGAGCGTGG
CircID chr6:31687642|31687878
ORF Type ORF6
Protein Length 27
Nucleotide Length 81
Protein Sequence MGGGRGLVSVCPPLLPGRTRARLPLER
Nucleotide Sequence ATGGGAGGTGGAAGAGGACTGGTGTCTGTCTGTCCTCCGCTCCTACCAGGCAGAACACGGGCCCGACTTCCCCTGGAGCGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab