CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31730648|31730886
Strand -
CircType exon
Host Gene ENSG00000213719.7;
Algorism CIRI2;
Sequence CCCACAATAAAAATCTGACCCAGGCCCCCCATTTCTTTCCCTCATCCCCTCTTCCACCACACCATCCCGGAACAAGTGCTCCAGGATTCCCTGCCCACTGGCCATTTTGGAGTGTGTCCATTGGGTAGCAATGTGGAAACCACCAGGGCCTTTGTGGAGAAAATGGAGGGGGTTGAGGGAGTCCCAGGAGGGGCTTATTTGAGGGCCTTTGCCACTTGCTCATAGGCGAGCTCGATCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31730648|31730886 hsa-miR-136-5p 0 0 1
chr6:31730648|31730886 hsa-miR-136-3p 0 0 1
chr6:31730648|31730886 hsa-miR-603 0 0 1
chr6:31730648|31730886 hsa-miR-661 1 0 1
chr6:31730648|31730886 hsa-miR-1291 0 0 1
chr6:31730648|31730886 hsa-miR-1255a 1 0 1
chr6:31730648|31730886 hsa-miR-876-3p 0 0 1
chr6:31730648|31730886 hsa-miR-556-5p 0 0 1
chr6:31730648|31730886 hsa-miR-1207-5p 1 0 1
chr6:31730648|31730886 hsa-miR-515-5p 0 0 1
chr6:31730648|31730886 hsa-miR-323-5p 0 0 1
chr6:31730648|31730886 hsa-miR-1255b 0 0 1
chr6:31730648|31730886 hsa-miR-7 0 0 1
chr6:31730648|31730886 hsa-miR-551a 1 0 0
chr6:31730648|31730886 hsa-miR-608 1 0 0
chr6:31730648|31730886 hsa-miR-638 1 0 0
chr6:31730648|31730886 hsa-miR-762 1 0 0
chr6:31730648|31730886 hsa-miR-765 1 0 0
chr6:31730648|31730886 hsa-miR-760 1 0 0
chr6:31730648|31730886 hsa-miR-1293 1 0 0
chr6:31730648|31730886 hsa-miR-1268a 1 0 0
chr6:31730648|31730886 hsa-miR-1913 1 0 0
chr6:31730648|31730886 hsa-miR-2861 1 0 0
chr6:31730648|31730886 hsa-miR-3154 1 0 0
chr6:31730648|31730886 hsa-miR-3185 1 0 0
chr6:31730648|31730886 hsa-miR-4298 1 0 0
chr6:31730648|31730886 hsa-miR-4271 1 0 0
chr6:31730648|31730886 hsa-miR-3911 1 0 0
chr6:31730648|31730886 hsa-miR-3916 1 0 0
chr6:31730648|31730886 hsa-miR-3943 1 0 0
chr6:31730648|31730886 hsa-miR-1268b 1 0 0
chr6:31730648|31730886 hsa-miR-4450 1 0 0
chr6:31730648|31730886 hsa-miR-4483 1 0 0
chr6:31730648|31730886 hsa-miR-4488 1 0 0
chr6:31730648|31730886 hsa-miR-4506 1 0 0
chr6:31730648|31730886 hsa-miR-2392 1 0 0
chr6:31730648|31730886 hsa-miR-4510 1 0 0
chr6:31730648|31730886 hsa-miR-4516 1 0 0
chr6:31730648|31730886 hsa-miR-4525 1 0 0
chr6:31730648|31730886 hsa-miR-4534 1 0 0
chr6:31730648|31730886 hsa-miR-4651 1 0 0
chr6:31730648|31730886 hsa-miR-4656 1 0 0
chr6:31730648|31730886 hsa-miR-4688 1 0 0
chr6:31730648|31730886 hsa-miR-4689 1 0 0
chr6:31730648|31730886 hsa-miR-4739 1 0 0
chr6:31730648|31730886 hsa-miR-4784 1 0 0
chr6:31730648|31730886 hsa-miR-5194 1 0 0
chr6:31730648|31730886 hsa-miR-5739 1 0 0
chr6:31730648|31730886 hsa-miR-5787 1 0 0
chr6:31730648|31730886 hsa-miR-6077 1 0 0
chr6:31730648|31730886 hsa-miR-6085 1 0 0
chr6:31730648|31730886 hsa-miR-6090 1 0 0
chr6:31730648|31730886 hsa-miR-6124 1 0 0
chr6:31730648|31730886 hsa-miR-6127 1 0 0
chr6:31730648|31730886 hsa-miR-6133 1 0 0
chr6:31730648|31730886 hsa-miR-6745 1 0 0
chr6:31730648|31730886 hsa-miR-7150 1 0 0
chr6:31730648|31730886 hsa-miR-8085 1 0 0
chr6:31730648|31730886 hsa-miR-12120 1 0 0
chr6:31730648|31730886 hsa-miR-12128 1 0 0
chr6:31730648|31730886 hsa-miR-4433b-3p 1 0 0
chr6:31730648|31730886 hsa-miR-128-1-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6734-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6747-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6861-5p 1 0 0
chr6:31730648|31730886 hsa-miR-7106-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6825-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6894-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6799-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6510-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6728-5p 1 0 0
chr6:31730648|31730886 hsa-miR-8071 1 0 0
chr6:31730648|31730886 hsa-miR-6833-5p 1 0 0
chr6:31730648|31730886 hsa-miR-5187-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6757-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6873-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6880-5p 1 0 0
chr6:31730648|31730886 hsa-miR-7847-3p 1 0 0
chr6:31730648|31730886 hsa-miR-6744-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4722-5p 1 0 0
chr6:31730648|31730886 hsa-miR-3622b-5p 1 0 0
chr6:31730648|31730886 hsa-miR-8069 1 0 0
chr6:31730648|31730886 hsa-miR-3189-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6776-5p 1 0 0
chr6:31730648|31730886 hsa-miR-7845-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6732-5p 1 0 0
chr6:31730648|31730886 hsa-miR-3190-3p 1 0 0
chr6:31730648|31730886 hsa-miR-6805-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6881-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6782-5p 1 0 0
chr6:31730648|31730886 hsa-miR-7109-3p 1 0 0
chr6:31730648|31730886 hsa-miR-7109-5p 1 0 0
chr6:31730648|31730886 hsa-miR-1226-5p 1 0 0
chr6:31730648|31730886 hsa-miR-3944-3p 1 0 0
chr6:31730648|31730886 hsa-miR-1229-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4640-5p 1 0 0
chr6:31730648|31730886 hsa-miR-3691-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6749-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6834-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4787-5p 1 0 0
chr6:31730648|31730886 hsa-miR-149-3p 1 0 0
chr6:31730648|31730886 hsa-miR-4640-3p 1 0 0
chr6:31730648|31730886 hsa-miR-5010-5p 1 0 0
chr6:31730648|31730886 hsa-miR-3189-3p 1 0 0
chr6:31730648|31730886 hsa-miR-423-5p 1 0 0
chr6:31730648|31730886 hsa-miR-654-5p 1 0 0
chr6:31730648|31730886 hsa-miR-7106-3p 1 0 0
chr6:31730648|31730886 hsa-miR-483-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4749-3p 1 0 0
chr6:31730648|31730886 hsa-miR-328-3p 1 0 0
chr6:31730648|31730886 hsa-miR-6732-3p 1 0 0
chr6:31730648|31730886 hsa-miR-6505-5p 1 0 0
chr6:31730648|31730886 hsa-miR-18b-3p 1 0 0
chr6:31730648|31730886 hsa-miR-1233-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4763-3p 1 0 0
chr6:31730648|31730886 hsa-miR-6769b-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6778-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6812-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6865-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6870-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6737-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6743-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6752-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6756-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6803-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6813-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6819-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6851-5p 1 0 0
chr6:31730648|31730886 hsa-miR-7107-5p 1 0 0
chr6:31730648|31730886 hsa-miR-7110-5p 1 0 0
chr6:31730648|31730886 hsa-miR-10401-5p 1 0 0
chr6:31730648|31730886 hsa-miR-11181-3p 1 0 0
chr6:31730648|31730886 hsa-miR-1249-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6751-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6788-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6797-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6879-5p 1 0 0
chr6:31730648|31730886 hsa-miR-7111-5p 1 0 0
chr6:31730648|31730886 hsa-miR-3620-5p 1 0 0
chr6:31730648|31730886 hsa-miR-5196-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6780b-5p 1 0 0
chr6:31730648|31730886 hsa-miR-10526-3p 1 0 0
chr6:31730648|31730886 hsa-miR-1237-5p 1 0 0
chr6:31730648|31730886 hsa-miR-328-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4649-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4745-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6729-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6738-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6795-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6846-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6848-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6858-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6883-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6887-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4697-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6845-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6885-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4769-5p 1 0 0
chr6:31730648|31730886 hsa-miR-30c-1-3p 1 0 0
chr6:31730648|31730886 hsa-miR-6731-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6758-5p 1 0 0
chr6:31730648|31730886 hsa-miR-1914-3p 1 0 0
chr6:31730648|31730886 hsa-miR-6736-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4646-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4747-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6891-5p 1 0 0
chr6:31730648|31730886 hsa-miR-4716-3p 1 0 0
chr6:31730648|31730886 hsa-miR-6766-5p 1 0 0
chr6:31730648|31730886 hsa-miR-3184-5p 1 0 0
chr6:31730648|31730886 hsa-miR-6762-5p 1 0 0
chr6:31730648|31730886 hsa-miR-1255b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:31730648|31730886
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MPTGHFGVCPLGSNVETTRAFVEKMEGVEGVPGGAYLRAFATCS
Nucleotide Sequence CTGCCCACTGGCCATTTTGGAGTGTGTCCATTGGGTAGCAATGTGGAAACCACCAGGGCCTTTGTGGAGAAAATGGAGGGGGTTGAGGGAGTCCCAGGAGGGGCTTATTTGAGGGCCTTTGCCACTTGCTCATAG
CircID chr6:31730648|31730886
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MAILECVHWVAMWKPPGPLWRKWRGLRESQEGLI
Nucleotide Sequence CTGGCCATTTTGGAGTGTGTCCATTGGGTAGCAATGTGGAAACCACCAGGGCCTTTGTGGAGAAAATGGAGGGGGTTGAGGGAGTCCCAGGAGGGGCTTATTTGA
CircID chr6:31730648|31730886
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MTQAPHFFPSSPLPPHHPGTSAPGFPAHWPFWSVSIG
Nucleotide Sequence CTGACCCAGGCCCCCCATTTCTTTCCCTCATCCCCTCTTCCACCACACCATCCCGGAACAAGTGCTCCAGGATTCCCTGCCCACTGGCCATTTTGGAGTGTGTCCATTGGGTAG
CircID chr6:31730648|31730886
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MVVSTLLPNGHTPKWPVGRESWSTCSGMVWWKRG
Nucleotide Sequence CTGGTGGTTTCCACATTGCTACCCAATGGACACACTCCAAAATGGCCAGTGGGCAGGGAATCCTGGAGCACTTGTTCCGGGATGGTGTGGTGGAAGAGGGGATGA
CircID chr6:31730648|31730886
ORF Type ORF5
Protein Length 74
Nucleotide Length 222
Protein Sequence MSKWQRPSNKPLLGLPQPPPFSPQRPWWFPHCYPMDTLQNGQWAGNPGALVPGWCGGRGDEGKKWGAWVRFLLW
Nucleotide Sequence ATGAGCAAGTGGCAAAGGCCCTCAAATAAGCCCCTCCTGGGACTCCCTCAACCCCCTCCATTTTCTCCACAAAGGCCCTGGTGGTTTCCACATTGCTACCCAATGGACACACTCCAAAATGGCCAGTGGGCAGGGAATCCTGGAGCACTTGTTCCGGGATGGTGTGGTGGAAGAGGGGATGAGGGAAAGAAATGGGGGGCCTGGGTCAGATTTTTATTGTGG
CircID chr6:31730648|31730886
ORF Type ORF6
Protein Length 35
Nucleotide Length 105
Protein Sequence MASGQGILEHLFRDGVVEEGMRERNGGPGSDFYCG
Nucleotide Sequence ATGGCCAGTGGGCAGGGAATCCTGGAGCACTTGTTCCGGGATGGTGTGGTGGAAGAGGGGATGAGGGAAAGAAATGGGGGGCCTGGGTCAGATTTTTATTGTGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab