CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31829619|31829867
Strand +
CircType exon
Host Gene ENSG00000204388.6;
Algorism CIRI2;
Sequence CTCCTCAATGGTAGGGCCTGACCCAGACCCTCCCTTGGGACCCTGAGCCCCGAAGCCGCCAGGCCCGGGACCACCGGCACCCTGGTACAGTCCGCTGATGATGGGGTTACACACCTGCTCCAGCTCCTTCCTCTTGTGCTCAAACTCGTCCTTCTCGGCCAAGGTGTTGGCGTCCAGCCACGAGATGACCTCTTGACACTTGTCCAGAACCTTCTTCTTGTCCGCCTCGCTGATCTTGCCCTTGAGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31829619|31829867 hsa-miR-31-5p 0 0 1
chr6:31829619|31829867 hsa-miR-31-3p 0 0 1
chr6:31829619|31829867 hsa-miR-335-5p 0 0 1
chr6:31829619|31829867 hsa-miR-335-3p 0 0 1
chr6:31829619|31829867 hsa-miR-422a 0 0 1
chr6:31829619|31829867 hsa-miR-708-5p 0 0 1
chr6:31829619|31829867 hsa-miR-708-3p 0 0 1
chr6:31829619|31829867 hsa-miR-1182 1 1 1
chr6:31829619|31829867 hsa-miR-1204 0 0 1
chr6:31829619|31829867 hsa-miR-1299 0 0 1
chr6:31829619|31829867 hsa-miR-1266-5p 0 0 1
chr6:31829619|31829867 hsa-miR-1266-3p 0 0 1
chr6:31829619|31829867 hsa-miR-1321 0 0 1
chr6:31829619|31829867 hsa-miR-1224-5p 0 0 1
chr6:31829619|31829867 hsa-miR-28-5p 0 0 1
chr6:31829619|31829867 hsa-miR-323-5p 0 0 1
chr6:31829619|31829867 hsa-miR-378 0 0 1
chr6:31829619|31829867 hsa-miR-516b 0 0 1
chr6:31829619|31829867 hsa-miR-24 0 0 1
chr6:31829619|31829867 hsa-miR-923 0 0 1
chr6:31829619|31829867 hsa-miR-583 1 0 0
chr6:31829619|31829867 hsa-miR-637 1 1 0
chr6:31829619|31829867 hsa-miR-658 1 0 0
chr6:31829619|31829867 hsa-miR-762 1 0 0
chr6:31829619|31829867 hsa-miR-760 1 0 0
chr6:31829619|31829867 hsa-miR-1268a 1 0 0
chr6:31829619|31829867 hsa-miR-2278 0 1 0
chr6:31829619|31829867 hsa-miR-2861 1 1 0
chr6:31829619|31829867 hsa-miR-3125 1 1 0
chr6:31829619|31829867 hsa-miR-3147 1 0 0
chr6:31829619|31829867 hsa-miR-3154 1 1 0
chr6:31829619|31829867 hsa-miR-3185 1 0 0
chr6:31829619|31829867 hsa-miR-4260 1 0 0
chr6:31829619|31829867 hsa-miR-4254 1 0 0
chr6:31829619|31829867 hsa-miR-4271 1 0 0
chr6:31829619|31829867 hsa-miR-4281 1 1 0
chr6:31829619|31829867 hsa-miR-3916 1 1 0
chr6:31829619|31829867 hsa-miR-1268b 1 0 0
chr6:31829619|31829867 hsa-miR-4437 1 1 0
chr6:31829619|31829867 hsa-miR-4442 1 0 0
chr6:31829619|31829867 hsa-miR-4449 1 1 0
chr6:31829619|31829867 hsa-miR-3135b 1 1 0
chr6:31829619|31829867 hsa-miR-4476 1 1 0
chr6:31829619|31829867 hsa-miR-4510 1 0 0
chr6:31829619|31829867 hsa-miR-4516 1 0 0
chr6:31829619|31829867 hsa-miR-4518 0 1 0
chr6:31829619|31829867 hsa-miR-4533 1 1 0
chr6:31829619|31829867 hsa-miR-4656 1 0 0
chr6:31829619|31829867 hsa-miR-4688 1 0 0
chr6:31829619|31829867 hsa-miR-4739 1 1 0
chr6:31829619|31829867 hsa-miR-4741 1 1 0
chr6:31829619|31829867 hsa-miR-5090 1 0 0
chr6:31829619|31829867 hsa-miR-5705 1 1 0
chr6:31829619|31829867 hsa-miR-6081 1 0 0
chr6:31829619|31829867 hsa-miR-6127 1 1 0
chr6:31829619|31829867 hsa-miR-6133 1 1 0
chr6:31829619|31829867 hsa-miR-8055 1 1 0
chr6:31829619|31829867 hsa-miR-8073 1 0 0
chr6:31829619|31829867 hsa-miR-12118 1 0 0
chr6:31829619|31829867 hsa-miR-1247-3p 1 0 0
chr6:31829619|31829867 hsa-miR-323a-5p 0 1 0
chr6:31829619|31829867 hsa-miR-6765-5p 1 1 0
chr6:31829619|31829867 hsa-miR-125b-1-3p 1 0 0
chr6:31829619|31829867 hsa-miR-7106-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6825-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6894-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6799-5p 1 0 0
chr6:31829619|31829867 hsa-miR-766-5p 1 0 0
chr6:31829619|31829867 hsa-miR-3934-5p 0 1 0
chr6:31829619|31829867 hsa-miR-7847-3p 1 0 0
chr6:31829619|31829867 hsa-miR-4695-5p 1 0 0
chr6:31829619|31829867 hsa-miR-7154-3p 1 0 0
chr6:31829619|31829867 hsa-miR-3928-3p 1 0 0
chr6:31829619|31829867 hsa-miR-6727-5p 1 1 0
chr6:31829619|31829867 hsa-miR-3605-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6768-5p 1 0 0
chr6:31829619|31829867 hsa-miR-23a-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6770-5p 1 1 0
chr6:31829619|31829867 hsa-miR-6760-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6874-5p 1 0 0
chr6:31829619|31829867 hsa-miR-5088-5p 1 1 0
chr6:31829619|31829867 hsa-miR-1226-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6740-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6784-5p 1 0 0
chr6:31829619|31829867 hsa-miR-4640-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6749-5p 1 1 0
chr6:31829619|31829867 hsa-miR-149-3p 1 1 0
chr6:31829619|31829867 hsa-miR-7850-5p 1 0 0
chr6:31829619|31829867 hsa-miR-7112-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6826-5p 1 0 0
chr6:31829619|31829867 hsa-miR-597-3p 1 0 0
chr6:31829619|31829867 hsa-miR-6814-5p 0 1 0
chr6:31829619|31829867 hsa-miR-4283 0 1 0
chr6:31829619|31829867 hsa-miR-10400-5p 1 0 0
chr6:31829619|31829867 hsa-miR-1207-5p 1 0 0
chr6:31829619|31829867 hsa-miR-1233-5p 1 0 0
chr6:31829619|31829867 hsa-miR-4763-3p 1 0 0
chr6:31829619|31829867 hsa-miR-6778-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6816-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6775-5p 1 0 0
chr6:31829619|31829867 hsa-miR-5001-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6726-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6743-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6754-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6813-5p 1 1 0
chr6:31829619|31829867 hsa-miR-7107-5p 1 0 0
chr6:31829619|31829867 hsa-miR-1249-5p 0 1 0
chr6:31829619|31829867 hsa-miR-6774-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6779-5p 1 1 0
chr6:31829619|31829867 hsa-miR-6797-5p 1 1 0
chr6:31829619|31829867 hsa-miR-6875-5p 1 0 0
chr6:31829619|31829867 hsa-miR-3620-5p 1 0 0
chr6:31829619|31829867 hsa-miR-5189-5p 1 0 0
chr6:31829619|31829867 hsa-miR-5196-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6780b-5p 1 0 0
chr6:31829619|31829867 hsa-miR-10396a-5p 1 0 0
chr6:31829619|31829867 hsa-miR-328-5p 1 0 0
chr6:31829619|31829867 hsa-miR-4632-5p 1 1 0
chr6:31829619|31829867 hsa-miR-4649-5p 1 0 0
chr6:31829619|31829867 hsa-miR-4725-3p 1 0 0
chr6:31829619|31829867 hsa-miR-6729-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6848-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6858-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6883-5p 0 1 0
chr6:31829619|31829867 hsa-miR-4436b-3p 1 0 0
chr6:31829619|31829867 hsa-miR-6856-5p 1 0 0
chr6:31829619|31829867 hsa-miR-4747-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6876-5p 1 1 0
chr6:31829619|31829867 hsa-miR-6891-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6785-5p 0 1 0
chr6:31829619|31829867 hsa-miR-6724-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6791-5p 1 0 0
chr6:31829619|31829867 hsa-miR-6859-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:31829619|31829867
ORF Type ORF1
Protein Length 69
Nucleotide Length 207
Protein Sequence MSPEAARPGTTGTLVQSADDGVTHLLQLLPLVLKLVLLGQGVGVQPRDDLLTLVQNLLLVRLADLALEP
Nucleotide Sequence CTGAGCCCCGAAGCCGCCAGGCCCGGGACCACCGGCACCCTGGTACAGTCCGCTGATGATGGGGTTACACACCTGCTCCAGCTCCTTCCTCTTGTGCTCAAACTCGTCCTTCTCGGCCAAGGTGTTGGCGTCCAGCCACGAGATGACCTCTTGACACTTGTCCAGAACCTTCTTCTTGTCCGCCTCGCTGATCTTGCCCTTGAGCCC
CircID chr6:31829619|31829867
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MMMGLHTCSSSFLLCSNSSFSAKVLASSHEMTS
Nucleotide Sequence CTGATGATGGGGTTACACACCTGCTCCAGCTCCTTCCTCTTGTGCTCAAACTCGTCCTTCTCGGCCAAGGTGTTGGCGTCCAGCCACGAGATGACCTCTTGA
CircID chr6:31829619|31829867
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MTQTLPWDPEPRSRQARDHRHPGTVR
Nucleotide Sequence CTGACCCAGACCCTCCCTTGGGACCCTGAGCCCCGAAGCCGCCAGGCCCGGGACCACCGGCACCCTGGTACAGTCCGCTGA
CircID chr6:31829619|31829867
ORF Type ORF4
Protein Length 69
Nucleotide Length 207
Protein Sequence MDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAGGPGPGGFGAQGPKGGSGSGPTIEE
Nucleotide Sequence CTGGACAAGTGTCAAGAGGTCATCTCGTGGCTGGACGCCAACACCTTGGCCGAGAAGGACGAGTTTGAGCACAAGAGGAAGGAGCTGGAGCAGGTGTGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGGTCCCGGGCCTGGCGGCTTCGGGGCTCAGGGTCCCAAGGGAGGGTCTGGGTCAGGCCCTACCATTGAGGAG
CircID chr6:31829619|31829867
ORF Type ORF5
Protein Length 47
Nucleotide Length 141
Protein Sequence MSTRGRSWSRCVTPSSADCTRVPVVPGLAASGLRVPREGLGQALPLR
Nucleotide Sequence TTGAGCACAAGAGGAAGGAGCTGGAGCAGGTGTGTAACCCCATCATCAGCGGACTGTACCAGGGTGCCGGTGGTCCCGGGCCTGGCGGCTTCGGGGCTCAGGGTCCCAAGGGAGGGTCTGGGTCAGGCCCTACCATTGAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab