CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31837745|31837914
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCTGTAATACAGTTTAGATCTGTCTCCCCACCAAATCTCATATTGAATTGTAATGGATCACTGGGGTGGATTCCTCATGAATGGCTTAAGCACCATCCTCCTTGATGCTGTGCTCATGACAGTCAGTTCTCTAGAGATCAATTTATTAAAAATGTGTGGCACCTCCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31837745|31837914 hsa-miR-146a-5p 0 0 1
chr6:31837745|31837914 hsa-miR-146a-3p 0 0 1
chr6:31837745|31837914 hsa-miR-433-5p 0 0 1
chr6:31837745|31837914 hsa-miR-433-3p 0 0 1
chr6:31837745|31837914 hsa-miR-640 0 0 1
chr6:31837745|31837914 hsa-miR-541-5p 0 0 1
chr6:31837745|31837914 hsa-miR-541-3p 0 0 1
chr6:31837745|31837914 hsa-miR-939-5p 0 0 1
chr6:31837745|31837914 hsa-miR-939-3p 0 0 1
chr6:31837745|31837914 hsa-miR-943 0 0 1
chr6:31837745|31837914 hsa-miR-1227-5p 0 0 1
chr6:31837745|31837914 hsa-miR-1227-3p 0 0 1
chr6:31837745|31837914 hsa-miR-1251-5p 0 0 1
chr6:31837745|31837914 hsa-miR-1251-3p 0 0 1
chr6:31837745|31837914 hsa-miR-548g-5p 0 0 1
chr6:31837745|31837914 hsa-miR-548g-3p 0 0 1
chr6:31837745|31837914 hsa-miR-1321 0 1 1
chr6:31837745|31837914 hsa-miR-491-5p 0 0 1
chr6:31837745|31837914 hsa-miR-654-5p 0 0 1
chr6:31837745|31837914 hsa-miR-885-5p 0 0 1
chr6:31837745|31837914 hsa-miR-518d-5p 0 1 1
chr6:31837745|31837914 hsa-miR-519b-5p 0 1 1
chr6:31837745|31837914 hsa-miR-519c-5p 0 1 1
chr6:31837745|31837914 hsa-miR-520c-5p 0 1 1
chr6:31837745|31837914 hsa-miR-146b-5p 0 1 1
chr6:31837745|31837914 hsa-miR-526a 0 0 1
chr6:31837745|31837914 hsa-miR-1245 0 0 1
chr6:31837745|31837914 hsa-miR-3689c 1 0 0
chr6:31837745|31837914 hsa-miR-4647 1 0 0
chr6:31837745|31837914 hsa-miR-4739 1 1 0
chr6:31837745|31837914 hsa-miR-12118 0 1 0
chr6:31837745|31837914 hsa-miR-203a-5p 0 1 0
chr6:31837745|31837914 hsa-miR-3150a-3p 0 1 0
chr6:31837745|31837914 hsa-miR-6825-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6894-5p 1 1 0
chr6:31837745|31837914 hsa-miR-6799-5p 1 0 0
chr6:31837745|31837914 hsa-miR-766-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6732-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6798-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6771-5p 1 0 0
chr6:31837745|31837914 hsa-miR-149-3p 1 0 0
chr6:31837745|31837914 hsa-miR-3925-5p 0 1 0
chr6:31837745|31837914 hsa-miR-598-5p 1 0 0
chr6:31837745|31837914 hsa-miR-4524a-3p 0 1 0
chr6:31837745|31837914 hsa-miR-514a-5p 1 0 0
chr6:31837745|31837914 hsa-miR-517-5p 0 1 0
chr6:31837745|31837914 hsa-miR-1273h-5p 1 0 0
chr6:31837745|31837914 hsa-miR-3689b-3p 1 0 0
chr6:31837745|31837914 hsa-miR-6778-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6754-5p 1 1 0
chr6:31837745|31837914 hsa-miR-6803-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6842-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6851-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6751-5p 1 0 0
chr6:31837745|31837914 hsa-miR-3689a-3p 1 0 0
chr6:31837745|31837914 hsa-miR-6777-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6795-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6887-5p 1 1 0
chr6:31837745|31837914 hsa-miR-6889-5p 1 0 0
chr6:31837745|31837914 hsa-miR-4723-5p 1 0 0
chr6:31837745|31837914 hsa-miR-3085-5p 1 0 0
chr6:31837745|31837914 hsa-miR-4664-5p 1 0 0
chr6:31837745|31837914 hsa-miR-6891-5p 0 1 0
chr6:31837745|31837914 hsa-miR-6766-5p 0 1 0
chr6:31837745|31837914 hsa-miR-3689d 1 0 0
chr6:31837745|31837914 hsa-miR-518e-5p 0 1 0
chr6:31837745|31837914 hsa-miR-518f-5p 0 1 0
chr6:31837745|31837914 hsa-miR-519a-5p 0 1 0
chr6:31837745|31837914 hsa-miR-522-5p 0 1 0
chr6:31837745|31837914 hsa-miR-523-5p 0 1 0
chr6:31837745|31837914 hsa-miR-526a-5p 0 1 0
chr6:31837745|31837914 hsa-miR-4756-5p 1 1 0
chr6:31837745|31837914 hsa-miR-7153-5p 0 1 0
chr6:31837745|31837914 hsa-miR-203b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:31837745|31837914
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MDHWGGFLMNGLSTILLDAVLMTVSSLEINLLKMCGTSL
Nucleotide Sequence ATGGATCACTGGGGTGGATTCCTCATGAATGGCTTAAGCACCATCCTCCTTGATGCTGTGCTCATGACAGTCAGTTCTCTAGAGATCAATTTATTAAAAATGTGTGGCACCTCCCTG
CircID chr6:31837745|31837914
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MISRELTVMSTASRRMVLKPFMRNPPQ
Nucleotide Sequence TTGATCTCTAGAGAACTGACTGTCATGAGCACAGCATCAAGGAGGATGGTGCTTAAGCCATTCATGAGGAATCCACCCCAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab