CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31865713|31865957
Strand -
CircType exon
Host Gene ENSG00000204385.9;
Algorism CIRI2;
Sequence TCCAAGATGACCCGGGCTATCTGCACAAGGGTCAGGATGAGGGCTCCAAATGCCAATGACCCAGTGTGGTAACTGCAGAGGGTGTTATGCAGTCAGAGACAGCTCCAGGACCCCTGGGGCCCCCGTGCCTACAATGACCAGGCCCCTGCCCCATCCTTACCGGAGTGTGCGGATGAAGGCAGAGATTAAGGGGAAGGTAGGGATGTCCTGGGGCTTGTGGAAGGCCCAGTAGAAGGAGGCAAAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31865713|31865957 hsa-miR-205-5p 0 0 1
chr6:31865713|31865957 hsa-miR-205-3p 0 0 1
chr6:31865713|31865957 hsa-miR-216a-5p 0 0 1
chr6:31865713|31865957 hsa-miR-216a-3p 0 0 1
chr6:31865713|31865957 hsa-miR-217-5p 0 0 1
chr6:31865713|31865957 hsa-miR-217-3p 0 0 1
chr6:31865713|31865957 hsa-miR-345-5p 0 0 1
chr6:31865713|31865957 hsa-miR-345-3p 0 0 1
chr6:31865713|31865957 hsa-miR-432-5p 0 0 1
chr6:31865713|31865957 hsa-miR-432-3p 0 0 1
chr6:31865713|31865957 hsa-miR-504-5p 0 0 1
chr6:31865713|31865957 hsa-miR-504-3p 0 0 1
chr6:31865713|31865957 hsa-miR-564 0 1 1
chr6:31865713|31865957 hsa-miR-593-5p 0 0 1
chr6:31865713|31865957 hsa-miR-593-3p 0 0 1
chr6:31865713|31865957 hsa-miR-616-5p 0 0 1
chr6:31865713|31865957 hsa-miR-616-3p 0 0 1
chr6:31865713|31865957 hsa-miR-626 0 0 1
chr6:31865713|31865957 hsa-miR-216b-5p 0 0 1
chr6:31865713|31865957 hsa-miR-216b-3p 0 0 1
chr6:31865713|31865957 hsa-miR-935 0 0 1
chr6:31865713|31865957 hsa-miR-1237-5p 0 0 1
chr6:31865713|31865957 hsa-miR-1237-3p 0 0 1
chr6:31865713|31865957 hsa-miR-1205 0 0 1
chr6:31865713|31865957 hsa-miR-1248 0 0 1
chr6:31865713|31865957 hsa-miR-1256 0 0 1
chr6:31865713|31865957 hsa-miR-296-5p 0 0 1
chr6:31865713|31865957 hsa-miR-486-3p 0 0 1
chr6:31865713|31865957 hsa-miR-615-5p 1 1 1
chr6:31865713|31865957 hsa-miR-1184 0 0 1
chr6:31865713|31865957 hsa-miR-140-3p 0 0 1
chr6:31865713|31865957 hsa-miR-1207-5p 1 1 1
chr6:31865713|31865957 hsa-miR-1233 0 0 1
chr6:31865713|31865957 hsa-miR-768-5p 0 0 1
chr6:31865713|31865957 hsa-miR-762 1 0 0
chr6:31865713|31865957 hsa-miR-1182 1 0 0
chr6:31865713|31865957 hsa-miR-2861 1 1 0
chr6:31865713|31865957 hsa-miR-4254 1 1 0
chr6:31865713|31865957 hsa-miR-3651 0 1 0
chr6:31865713|31865957 hsa-miR-1268b 1 0 0
chr6:31865713|31865957 hsa-miR-2392 0 1 0
chr6:31865713|31865957 hsa-miR-4522 1 0 0
chr6:31865713|31865957 hsa-miR-6072 0 1 0
chr6:31865713|31865957 hsa-miR-17-3p 0 1 0
chr6:31865713|31865957 hsa-miR-6840-3p 0 1 0
chr6:31865713|31865957 hsa-miR-6747-3p 1 1 0
chr6:31865713|31865957 hsa-miR-1233-3p 0 1 0
chr6:31865713|31865957 hsa-miR-3622a-5p 0 1 0
chr6:31865713|31865957 hsa-miR-6806-5p 1 1 0
chr6:31865713|31865957 hsa-miR-6721-5p 1 1 0
chr6:31865713|31865957 hsa-miR-5589-5p 1 0 0
chr6:31865713|31865957 hsa-miR-1915-5p 1 0 0
chr6:31865713|31865957 hsa-miR-6868-3p 0 1 0
chr6:31865713|31865957 hsa-miR-6728-3p 1 0 0
chr6:31865713|31865957 hsa-miR-1343-3p 1 0 0
chr6:31865713|31865957 hsa-miR-939-3p 1 0 0
chr6:31865713|31865957 hsa-miR-4793-5p 0 1 0
chr6:31865713|31865957 hsa-miR-5001-3p 1 1 0
chr6:31865713|31865957 hsa-miR-7113-3p 1 0 0
chr6:31865713|31865957 hsa-miR-6749-5p 1 0 0
chr6:31865713|31865957 hsa-miR-6789-5p 1 0 0
chr6:31865713|31865957 hsa-miR-1236-3p 1 0 0
chr6:31865713|31865957 hsa-miR-4687-5p 0 1 0
chr6:31865713|31865957 hsa-miR-5000-3p 0 1 0
chr6:31865713|31865957 hsa-miR-6865-3p 0 1 0
chr6:31865713|31865957 hsa-miR-5088-3p 1 0 0
chr6:31865713|31865957 hsa-miR-6738-3p 1 1 0
chr6:31865713|31865957 hsa-miR-6734-3p 0 1 0
chr6:31865713|31865957 hsa-miR-3162-3p 0 1 0
chr6:31865713|31865957 hsa-miR-3664-5p 1 0 0
chr6:31865713|31865957 hsa-miR-4763-3p 1 1 0
chr6:31865713|31865957 hsa-miR-6743-5p 1 0 0
chr6:31865713|31865957 hsa-miR-6756-5p 1 0 0
chr6:31865713|31865957 hsa-miR-6813-5p 1 0 0
chr6:31865713|31865957 hsa-miR-6722-3p 1 1 0
chr6:31865713|31865957 hsa-miR-3127-3p 1 0 0
chr6:31865713|31865957 hsa-miR-1909-3p 1 1 0
chr6:31865713|31865957 hsa-miR-328-5p 1 0 0
chr6:31865713|31865957 hsa-miR-6848-5p 1 0 0
chr6:31865713|31865957 hsa-miR-6791-5p 1 0 0
chr6:31865713|31865957 hsa-miR-6756-3p 1 0 0
chr6:31865713|31865957 hsa-miR-6891-3p 0 1 0
chr6:31865713|31865957 hsa-miR-3085-3p 1 0 0
chr6:31865713|31865957 hsa-miR-5581-5p 0 1 0
chr6:31865713|31865957 hsa-miR-6783-3p 1 0 0
chr6:31865713|31865957 hsa-miR-6781-3p 1 0 0
chr6:31865713|31865957 hsa-miR-3121-5p 0 1 0
chr6:31865713|31865957 hsa-miR-301a-5p 1 1 0
chr6:31865713|31865957 hsa-miR-301b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:31865713|31865957
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MQRVLCSQRQLQDPWGPRAYNDQAPAPSLPECADEGRD
Nucleotide Sequence CTGCAGAGGGTGTTATGCAGTCAGAGACAGCTCCAGGACCCCTGGGGCCCCCGTGCCTACAATGACCAGGCCCCTGCCCCATCCTTACCGGAGTGTGCGGATGAAGGCAGAGATTAA

CircID chr6:31865713|31865957
ORF Type ORF2
Protein Length 60
Nucleotide Length 183
Protein Sequence MPMTQCGNCRGCYAVRDSSRTPGAPVPTMTRPLPHPYRSVRMKAEIKGKVGMSWGLWKAQ
Nucleotide Sequence ATGCCAATGACCCAGTGTGGTAACTGCAGAGGGTGTTATGCAGTCAGAGACAGCTCCAGGACCCCTGGGGCCCCCGTGCCTACAATGACCAGGCCCCTGCCCCATCCTTACCGGAGTGTGCGGATGAAGGCAGAGATTAAGGGGAAGGTAGGGATGTCCTGGGGCTTGTGGAAGGCCCAGTAG

CircID chr6:31865713|31865957
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MHNTLCSYHTGSLAFGALILTLVQIARVIL
Nucleotide Sequence CTGCATAACACCCTCTGCAGTTACCACACTGGGTCATTGGCATTTGGAGCCCTCATCCTGACCCTTGTGCAGATAGCCCGGGTCATCTTG

CircID chr6:31865713|31865957
ORF Type ORF4
Protein Length 65
Nucleotide Length 198
Protein Sequence MGLPQAPGHPYLPLNLCLHPHTPVRMGQGPGHCRHGGPRGPGAVSDCITPSAVTTLGHWHLEPSS
Nucleotide Sequence CTGGGCCTTCCACAAGCCCCAGGACATCCCTACCTTCCCCTTAATCTCTGCCTTCATCCGCACACTCCGGTAAGGATGGGGCAGGGGCCTGGTCATTGTAGGCACGGGGGCCCCAGGGGTCCTGGAGCTGTCTCTGACTGCATAACACCCTCTGCAGTTACCACACTGGGTCATTGGCATTTGGAGCCCTCATCCTGA

CircID chr6:31865713|31865957
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MQLPHWVIGIWSPHPDPCADSPGHLG
Nucleotide Sequence CTGCAGTTACCACACTGGGTCATTGGCATTTGGAGCCCTCATCCTGACCCTTGTGCAGATAGCCCGGGTCATCTTGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites