CircRNA Information

General Information
circRNA Basic Information
CircID chr6:31951438|31951904
Strand +
CircType exon
Host Gene ENSG00000244255.4;
Algorism CIRI2;
Sequence ATCCACTACTCCCCAGCTGATTACACCAACTTGAATGAAACGACTTCTCTTGTGAACTATCAAGGGGCCGCCAGAATCACCTGCAAGGAGAGGAGAAGCTGTAGAGAAAAGGACTGTTGGGCCTTGGGCACTTGTAGCACAACCAAAGAGCATTCTCTCACCTCTGCAAGTATTGGGGTCAGCATAGGGACTCACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:31951438|31951904 hsa-miR-26b-5p 0 0 1
chr6:31951438|31951904 hsa-miR-26b-3p 0 0 1
chr6:31951438|31951904 hsa-miR-212-5p 0 0 1
chr6:31951438|31951904 hsa-miR-212-3p 0 0 1
chr6:31951438|31951904 hsa-miR-221-5p 0 0 1
chr6:31951438|31951904 hsa-miR-221-3p 0 0 1
chr6:31951438|31951904 hsa-miR-222-5p 0 0 1
chr6:31951438|31951904 hsa-miR-222-3p 0 0 1
chr6:31951438|31951904 hsa-miR-132-5p 0 0 1
chr6:31951438|31951904 hsa-miR-132-3p 0 0 1
chr6:31951438|31951904 hsa-miR-657 0 0 1
chr6:31951438|31951904 hsa-miR-659-5p 0 0 1
chr6:31951438|31951904 hsa-miR-659-3p 0 0 1
chr6:31951438|31951904 hsa-miR-1298-5p 0 0 1
chr6:31951438|31951904 hsa-miR-1298-3p 0 0 1
chr6:31951438|31951904 hsa-miR-939-5p 0 0 1
chr6:31951438|31951904 hsa-miR-939-3p 0 0 1
chr6:31951438|31951904 hsa-miR-1297 0 0 1
chr6:31951438|31951904 hsa-miR-513b-5p 0 0 1
chr6:31951438|31951904 hsa-miR-513b-3p 0 0 1
chr6:31951438|31951904 hsa-miR-139-5p 0 0 1
chr6:31951438|31951904 hsa-miR-125a-3p 0 0 1
chr6:31951438|31951904 hsa-miR-502-5p 0 0 1
chr6:31951438|31951904 hsa-miR-1207-3p 0 0 1
chr6:31951438|31951904 hsa-miR-628-5p 0 0 1
chr6:31951438|31951904 hsa-miR-9 0 0 1
chr6:31951438|31951904 hsa-miR-26a 0 0 1
chr6:31951438|31951904 hsa-miR-218 0 0 1
chr6:31951438|31951904 hsa-miR-453 0 0 1
chr6:31951438|31951904 hsa-miR-623 1 0 0
chr6:31951438|31951904 hsa-miR-3665 1 0 0
chr6:31951438|31951904 hsa-miR-4747-3p 1 0 0
chr6:31951438|31951904 hsa-miR-323a-5p 1 0 0
chr6:31951438|31951904 hsa-miR-1225-3p 1 0 0
chr6:31951438|31951904 hsa-miR-3677-5p 1 0 0
chr6:31951438|31951904 hsa-miR-6845-3p 1 0 0
chr6:31951438|31951904 hsa-miR-2467-3p 1 0 0
chr6:31951438|31951904 hsa-miR-6782-5p 1 0 0
chr6:31951438|31951904 hsa-miR-1226-5p 1 0 0
chr6:31951438|31951904 hsa-miR-2276-3p 1 0 0
chr6:31951438|31951904 hsa-miR-3922-5p 1 0 0
chr6:31951438|31951904 hsa-miR-6761-5p 1 0 0
chr6:31951438|31951904 hsa-miR-6800-3p 1 0 0
chr6:31951438|31951904 hsa-miR-1233-5p 1 0 0
chr6:31951438|31951904 hsa-miR-6851-5p 1 0 0
chr6:31951438|31951904 hsa-miR-6751-5p 1 0 0
chr6:31951438|31951904 hsa-miR-6856-5p 1 0 0
chr6:31951438|31951904 hsa-miR-10394-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:31951438|31951904
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence MNETTSLVNYQGAARITCKERRSCREKDCWALGTCSTTKEHSLTSASIGVSIGTH
Nucleotide Sequence TTGAATGAAACGACTTCTCTTGTGAACTATCAAGGGGCCGCCAGAATCACCTGCAAGGAGAGGAGAAGCTGTAGAGAAAAGGACTGTTGGGCCTTGGGCACTTGTAGCACAACCAAAGAGCATTCTCTCACCTCTGCAAGTATTGGGGTCAGCATAGGGACTCAC

CircID chr6:31951438|31951904
ORF Type ORF2
Protein Length 41
Nucleotide Length 126
Protein Sequence MLTPILAEVRECSLVVLQVPKAQQSFSLQLLLSLQVILAAP
Nucleotide Sequence ATGCTGACCCCAATACTTGCAGAGGTGAGAGAATGCTCTTTGGTTGTGCTACAAGTGCCCAAGGCCCAACAGTCCTTTTCTCTACAGCTTCTCCTCTCCTTGCAGGTGATTCTGGCGGCCCCTTGA

CircID chr6:31951438|31951904
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MLFGCATSAQGPTVLFSTASPLLAGDSGGPLIVHKRSRFIQVGVISWGVVD
Nucleotide Sequence ATGCTCTTTGGTTGTGCTACAAGTGCCCAAGGCCCAACAGTCCTTTTCTCTACAGCTTCTCCTCTCCTTGCAGGTGATTCTGGCGGCCCCTTGATAGTTCACAAGAGAAGTCGTTTCATTCAAGTTGGTGTAATCAGCTGGGGAGTAGTGGAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites