CircRNA Information

General Information
circRNA Basic Information
CircID chr6:32167388|32167625
Strand +
CircType exon
Host Gene ENSG00000258388.6;
Algorism CIRI2;
Sequence CTGGTCGCTGAGAGATTCGATCCGGTCACCCCGGCCCCACAGCTCAGCCACCTGTTCTGGCTGCAGCTCTTCAGGCGGCACGGGCAGCACCGCTCTGACCCAGGCCCCAGCCTGACCGGCCCACTGCTCCAGCCGCTCCAGGCGCCCTCGCAGCTCGTGAATCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:32167388|32167625 hsa-miR-484 0 0 1
chr6:32167388|32167625 hsa-miR-552-5p 0 0 1
chr6:32167388|32167625 hsa-miR-552-3p 0 0 1
chr6:32167388|32167625 hsa-miR-558 0 0 1
chr6:32167388|32167625 hsa-miR-661 1 0 1
chr6:32167388|32167625 hsa-miR-216b-5p 0 0 1
chr6:32167388|32167625 hsa-miR-216b-3p 0 0 1
chr6:32167388|32167625 hsa-miR-1250-5p 0 0 1
chr6:32167388|32167625 hsa-miR-1250-3p 0 0 1
chr6:32167388|32167625 hsa-miR-491-5p 0 0 1
chr6:32167388|32167625 hsa-miR-1184 0 0 1
chr6:32167388|32167625 hsa-miR-566 0 0 1
chr6:32167388|32167625 hsa-miR-1254 0 0 1
chr6:32167388|32167625 hsa-miR-602 1 0 0
chr6:32167388|32167625 hsa-miR-637 1 0 0
chr6:32167388|32167625 hsa-miR-762 1 0 0
chr6:32167388|32167625 hsa-miR-663b 1 0 0
chr6:32167388|32167625 hsa-miR-2278 1 0 0
chr6:32167388|32167625 hsa-miR-2861 1 0 0
chr6:32167388|32167625 hsa-miR-3196 1 0 0
chr6:32167388|32167625 hsa-miR-3937 1 0 0
chr6:32167388|32167625 hsa-miR-4430 1 0 0
chr6:32167388|32167625 hsa-miR-3135b 1 0 0
chr6:32167388|32167625 hsa-miR-4488 1 0 0
chr6:32167388|32167625 hsa-miR-4498 1 0 0
chr6:32167388|32167625 hsa-miR-4505 1 0 0
chr6:32167388|32167625 hsa-miR-1587 1 0 0
chr6:32167388|32167625 hsa-miR-4538 1 0 0
chr6:32167388|32167625 hsa-miR-3960 1 0 0
chr6:32167388|32167625 hsa-miR-4651 1 0 0
chr6:32167388|32167625 hsa-miR-4741 1 0 0
chr6:32167388|32167625 hsa-miR-5787 1 0 0
chr6:32167388|32167625 hsa-miR-6069 1 0 0
chr6:32167388|32167625 hsa-miR-6081 1 0 0
chr6:32167388|32167625 hsa-miR-6085 1 0 0
chr6:32167388|32167625 hsa-miR-7704 1 0 0
chr6:32167388|32167625 hsa-miR-8089 1 0 0
chr6:32167388|32167625 hsa-miR-4433b-3p 1 0 0
chr6:32167388|32167625 hsa-miR-128-1-5p 1 0 0
chr6:32167388|32167625 hsa-miR-1287-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6765-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6857-5p 1 0 0
chr6:32167388|32167625 hsa-miR-1227-5p 1 0 0
chr6:32167388|32167625 hsa-miR-7114-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6089 1 0 0
chr6:32167388|32167625 hsa-miR-5589-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6742-5p 1 0 0
chr6:32167388|32167625 hsa-miR-3151-5p 1 0 0
chr6:32167388|32167625 hsa-miR-3180-3p 1 0 0
chr6:32167388|32167625 hsa-miR-6796-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6786-5p 1 0 0
chr6:32167388|32167625 hsa-miR-3944-3p 1 0 0
chr6:32167388|32167625 hsa-miR-1229-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6749-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6501-5p 1 0 0
chr6:32167388|32167625 hsa-miR-4446-3p 1 0 0
chr6:32167388|32167625 hsa-miR-6781-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6877-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6869-5p 1 0 0
chr6:32167388|32167625 hsa-miR-4746-3p 1 0 0
chr6:32167388|32167625 hsa-miR-10400-5p 1 0 0
chr6:32167388|32167625 hsa-miR-4763-3p 1 0 0
chr6:32167388|32167625 hsa-miR-6787-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6816-5p 1 0 0
chr6:32167388|32167625 hsa-miR-5001-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6756-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6803-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6813-5p 1 0 0
chr6:32167388|32167625 hsa-miR-7107-5p 1 0 0
chr6:32167388|32167625 hsa-miR-3620-5p 1 0 0
chr6:32167388|32167625 hsa-miR-1237-5p 1 0 0
chr6:32167388|32167625 hsa-miR-1909-3p 1 0 0
chr6:32167388|32167625 hsa-miR-6846-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6848-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6511b-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6724-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6791-5p 1 0 0
chr6:32167388|32167625 hsa-miR-6762-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:32167388|32167625
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence LVAERFDPVTPAPQLSHLFWLQLFRRHGQHRSDPGPSLTGPLLQPLQAPSQLVNL
Nucleotide Sequence CTGGTCGCTGAGAGATTCGATCCGGTCACCCCGGCCCCACAGCTCAGCCACCTGTTCTGGCTGCAGCTCTTCAGGCGGCACGGGCAGCACCGCTCTGACCCAGGCCCCAGCCTGACCGGCCCACTGCTCCAGCCGCTCCAGGCGCCCTCGCAGCTCGTGAATCTC
CircID chr6:32167388|32167625
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MRDSIRSPRPHSSATCSGCSSSGGTGSTALTQAPA
Nucleotide Sequence CTGAGAGATTCGATCCGGTCACCCCGGCCCCACAGCTCAGCCACCTGTTCTGGCTGCAGCTCTTCAGGCGGCACGGGCAGCACCGCTCTGACCCAGGCCCCAGCCTGA
CircID chr6:32167388|32167625
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MRGRLERLEQWAGQAGAWVRAVLPVPPEELQPEQVAELWGRGDRIESLSDQ
Nucleotide Sequence CTGCGAGGGCGCCTGGAGCGGCTGGAGCAGTGGGCCGGTCAGGCTGGGGCCTGGGTCAGAGCGGTGCTGCCCGTGCCGCCTGAAGAGCTGCAGCCAGAACAGGTGGCTGAGCTGTGGGGCCGGGGTGACCGGATCGAATCTCTCAGCGACCAG
CircID chr6:32167388|32167625
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MGPGSERCCPCRLKSCSQNRWLSCGAGVTGSNLSAT
Nucleotide Sequence CTGGGGCCTGGGTCAGAGCGGTGCTGCCCGTGCCGCCTGAAGAGCTGCAGCCAGAACAGGTGGCTGAGCTGTGGGGCCGGGGTGACCGGATCGAATCTCTCAGCGACC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab