CircRNA Information

General Information
circRNA Basic Information
CircID chr6:32183724|32184223
Strand -
CircType exon
Host Gene ENSG00000204305.12;
Algorism CIRI2;
Sequence CTTCCAAGCTTCTGTCCGGCCTGTGTTCAGTTTCCATTCCAGCCGCTGGGGTGGTTTCTTGGGGGCCCCCTTACACTTCAGCACCAGTGGCTCGCCAATCCGGGCTGTGATGTTTTGAGCACCTACTACTGCCCCTGGGAGATAGCACCATGGTAGAGGGGTAGGAAGGGAATGAGGGCTAACAAAATTTGGACAGGGTGGGTGAGGGACCTTGAAAGGCACTTCCTCGGGTTCTGGGAAAAGTTCTAGGACGACTGGGGTGTGGGGTTAAAGTGCTTTCTGCAGGGAGGGTCAGTGGGGTTGAGGGAGTGGCTCACCCCACAGACTGAGGACCAGCACCCAGGCTCCAACTGCTGTTCCGGCAGCCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:32183724|32184223 hsa-miR-10a-5p 0 0 1
chr6:32183724|32184223 hsa-miR-10a-3p 0 0 1
chr6:32183724|32184223 hsa-miR-10b-5p 0 0 1
chr6:32183724|32184223 hsa-miR-10b-3p 0 0 1
chr6:32183724|32184223 hsa-miR-204-5p 0 0 1
chr6:32183724|32184223 hsa-miR-204-3p 0 0 1
chr6:32183724|32184223 hsa-miR-211-5p 0 0 1
chr6:32183724|32184223 hsa-miR-211-3p 0 0 1
chr6:32183724|32184223 hsa-miR-150-5p 0 0 1
chr6:32183724|32184223 hsa-miR-150-3p 0 0 1
chr6:32183724|32184223 hsa-miR-206 0 0 1
chr6:32183724|32184223 hsa-miR-498-5p 0 0 1
chr6:32183724|32184223 hsa-miR-498-3p 0 0 1
chr6:32183724|32184223 hsa-miR-519e-5p 0 0 1
chr6:32183724|32184223 hsa-miR-519e-3p 0 0 1
chr6:32183724|32184223 hsa-miR-504-5p 0 0 1
chr6:32183724|32184223 hsa-miR-504-3p 0 0 1
chr6:32183724|32184223 hsa-miR-573 0 0 1
chr6:32183724|32184223 hsa-miR-604 0 0 1
chr6:32183724|32184223 hsa-miR-608 0 0 1
chr6:32183724|32184223 hsa-miR-613 0 0 1
chr6:32183724|32184223 hsa-miR-622 0 0 1
chr6:32183724|32184223 hsa-miR-623 0 0 1
chr6:32183724|32184223 hsa-miR-647 0 0 1
chr6:32183724|32184223 hsa-miR-661 0 0 1
chr6:32183724|32184223 hsa-miR-1323 0 0 1
chr6:32183724|32184223 hsa-miR-298 0 0 1
chr6:32183724|32184223 hsa-miR-548o-3p 0 0 1
chr6:32183724|32184223 hsa-miR-548o 0 0 1
chr6:32183724|32184223 hsa-miR-296-5p 0 0 1
chr6:32183724|32184223 hsa-miR-491-5p 0 0 1
chr6:32183724|32184223 hsa-miR-486-3p 0 0 1
chr6:32183724|32184223 hsa-miR-532-3p 0 0 1
chr6:32183724|32184223 hsa-miR-339-5p 1 0 1
chr6:32183724|32184223 hsa-miR-199b-3p 0 0 1
chr6:32183724|32184223 hsa-miR-199a-3p 0 0 1
chr6:32183724|32184223 hsa-miR-342-5p 0 0 1
chr6:32183724|32184223 hsa-miR-515-3p 0 0 1
chr6:32183724|32184223 hsa-miR-138 0 0 1
chr6:32183724|32184223 hsa-miR-1 0 0 1
chr6:32183724|32184223 hsa-miR-129-3p 0 0 1
chr6:32183724|32184223 hsa-miR-499-3p 0 0 1
chr6:32183724|32184223 hsa-miR-602 1 0 0
chr6:32183724|32184223 hsa-miR-1470 1 0 0
chr6:32183724|32184223 hsa-miR-4287 1 0 0
chr6:32183724|32184223 hsa-miR-4496 1 0 0
chr6:32183724|32184223 hsa-miR-4522 1 0 0
chr6:32183724|32184223 hsa-miR-4539 1 0 0
chr6:32183724|32184223 hsa-miR-5093 1 0 0
chr6:32183724|32184223 hsa-miR-138-5p 1 0 0
chr6:32183724|32184223 hsa-miR-6749-3p 1 0 0
chr6:32183724|32184223 hsa-miR-1287-5p 1 0 0
chr6:32183724|32184223 hsa-miR-4433a-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6892-3p 1 0 0
chr6:32183724|32184223 hsa-miR-3692-5p 1 0 0
chr6:32183724|32184223 hsa-miR-6089 1 0 0
chr6:32183724|32184223 hsa-miR-1225-3p 1 0 0
chr6:32183724|32184223 hsa-miR-7110-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6841-3p 1 0 0
chr6:32183724|32184223 hsa-miR-1292-5p 1 0 0
chr6:32183724|32184223 hsa-miR-6884-3p 1 0 0
chr6:32183724|32184223 hsa-miR-7108-3p 1 0 0
chr6:32183724|32184223 hsa-miR-1909-5p 1 0 0
chr6:32183724|32184223 hsa-miR-6803-3p 1 0 0
chr6:32183724|32184223 hsa-miR-7113-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6749-5p 1 0 0
chr6:32183724|32184223 hsa-miR-6781-5p 1 0 0
chr6:32183724|32184223 hsa-miR-7112-5p 1 0 0
chr6:32183724|32184223 hsa-miR-1226-3p 1 0 0
chr6:32183724|32184223 hsa-miR-7106-3p 1 0 0
chr6:32183724|32184223 hsa-miR-4687-5p 1 0 0
chr6:32183724|32184223 hsa-miR-4732-3p 1 0 0
chr6:32183724|32184223 hsa-miR-330-3p 1 0 0
chr6:32183724|32184223 hsa-miR-7112-3p 1 0 0
chr6:32183724|32184223 hsa-miR-1224-3p 1 0 0
chr6:32183724|32184223 hsa-miR-1180-5p 1 0 0
chr6:32183724|32184223 hsa-miR-6752-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6895-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6886-3p 1 0 0
chr6:32183724|32184223 hsa-miR-4749-3p 1 0 0
chr6:32183724|32184223 hsa-miR-328-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6760-3p 1 0 0
chr6:32183724|32184223 hsa-miR-3620-3p 1 0 0
chr6:32183724|32184223 hsa-miR-1229-3p 1 0 0
chr6:32183724|32184223 hsa-miR-4750-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6779-3p 1 0 0
chr6:32183724|32184223 hsa-miR-338-5p 1 0 0
chr6:32183724|32184223 hsa-miR-6732-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6510-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6750-3p 1 0 0
chr6:32183724|32184223 hsa-miR-3162-3p 1 0 0
chr6:32183724|32184223 hsa-miR-4716-5p 1 0 0
chr6:32183724|32184223 hsa-miR-4685-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6754-3p 1 0 0
chr6:32183724|32184223 hsa-miR-3620-5p 1 0 0
chr6:32183724|32184223 hsa-miR-4726-5p 1 0 0
chr6:32183724|32184223 hsa-miR-6799-3p 1 0 0
chr6:32183724|32184223 hsa-miR-1199-5p 1 0 0
chr6:32183724|32184223 hsa-miR-7151-3p 1 0 0
chr6:32183724|32184223 hsa-miR-324-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6753-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6511a-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6756-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6784-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6862-3p 1 0 0
chr6:32183724|32184223 hsa-miR-10401-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6775-3p 1 0 0
chr6:32183724|32184223 hsa-miR-4723-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6511b-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6819-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6891-3p 1 0 0
chr6:32183724|32184223 hsa-miR-7114-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6848-3p 1 0 0
chr6:32183724|32184223 hsa-miR-146b-5p 1 0 0
chr6:32183724|32184223 hsa-miR-412-3p 1 0 0
chr6:32183724|32184223 hsa-miR-6506-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:32183724|32184223
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MGWFLGGPLTLQHQWLANPGCDVLSTYYCPWEIAPW
Nucleotide Sequence CTGGGGTGGTTTCTTGGGGGCCCCCTTACACTTCAGCACCAGTGGCTCGCCAATCCGGGCTGTGATGTTTTGAGCACCTACTACTGCCCCTGGGAGATAGCACCATGGTAG
CircID chr6:32183724|32184223
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MRANKIWTGWVRDLERHFLGFWEKF
Nucleotide Sequence ATGAGGGCTAACAAAATTTGGACAGGGTGGGTGAGGGACCTTGAAAGGCACTTCCTCGGGTTCTGGGAAAAGTTCTAG
CircID chr6:32183724|32184223
ORF Type ORF3
Protein Length 30
Nucleotide Length 90
Protein Sequence MQGGSVGLREWLTPQTEDQHPGSNCCSGSH
Nucleotide Sequence CTGCAGGGAGGGTCAGTGGGGTTGAGGGAGTGGCTCACCCCACAGACTGAGGACCAGCACCCAGGCTCCAACTGCTGTTCCGGCAGCCAT
CircID chr6:32183724|32184223
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MSGLCSVSIPAAGVVSWGPPYTSAPVARQSGL
Nucleotide Sequence CTGTCCGGCCTGTGTTCAGTTTCCATTCCAGCCGCTGGGGTGGTTTCTTGGGGGCCCCCTTACACTTCAGCACCAGTGGCTCGCCAATCCGGGCTGTGA
CircID chr6:32183724|32184223
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MGKVLGRLGCGVKVLSAGRVSGVEGVAHPTD
Nucleotide Sequence CTGGGAAAAGTTCTAGGACGACTGGGGTGTGGGGTTAAAGTGCTTTCTGCAGGGAGGGTCAGTGGGGTTGAGGGAGTGGCTCACCCCACAGACTGA
CircID chr6:32183724|32184223
ORF Type ORF6
Protein Length 38
Nucleotide Length 117
Protein Sequence MTLPAESTLTPHPSRPRTFPRTRGSAFQGPSPTLSKFC
Nucleotide Sequence CTGACCCTCCCTGCAGAAAGCACTTTAACCCCACACCCCAGTCGTCCTAGAACTTTTCCCAGAACCCGAGGAAGTGCCTTTCAAGGTCCCTCACCCACCCTGTCCAAATTTTGTTAG
CircID chr6:32183724|32184223
ORF Type ORF7
Protein Length 26
Nucleotide Length 81
Protein Sequence MVLSPRGSSRCSKHHSPDWRATGAEV
Nucleotide Sequence ATGGTGCTATCTCCCAGGGGCAGTAGTAGGTGCTCAAAACATCACAGCCCGGATTGGCGAGCCACTGGTGCTGAAGTGTAA
CircID chr6:32183724|32184223
ORF Type ORF8
Protein Length 25
Nucleotide Length 78
Protein Sequence MAAGTAVGAWVLVLSLWGEPLPQPH
Nucleotide Sequence ATGGCTGCCGGAACAGCAGTTGGAGCCTGGGTGCTGGTCCTCAGTCTGTGGGGTGAGCCACTCCCTCAACCCCACTGA
CircID chr6:32183724|32184223
ORF Type ORF9
Protein Length 29
Nucleotide Length 87
Protein Sequence MVLKCKGAPKKPPQRLEWKLNTGRTEAWK
Nucleotide Sequence CTGGTGCTGAAGTGTAAGGGGGCCCCCAAGAAACCACCCCAGCGGCTGGAATGGAAACTGAACACAGGCCGGACAGAAGCTTGGAAG
CircID chr6:32183724|32184223
ORF Type ORF10
Protein Length 39
Nucleotide Length 120
Protein Sequence MPEQQLEPGCWSSVCGVSHSLNPTDPPCRKHFNPTPQSS
Nucleotide Sequence CTGCCGGAACAGCAGTTGGAGCCTGGGTGCTGGTCCTCAGTCTGTGGGGTGAGCCACTCCCTCAACCCCACTGACCCTCCCTGCAGAAAGCACTTTAACCCCACACCCCAGTCGTCCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab